Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019253 Sechium edule HOM05D007214 ORTHO05D008907 1.1e-116 423.7 269 100.0
CsaV3_3G041890 Cucumis sativus L. HOM05D062301 ORTHO05D008907 3.8e-26 122.9 231 49.8
Glyma.04G176300 Glycine max HOM05D007214 ORTHO05D008907 4.9e-21 105.9 243 33.3
CiPaw.04G066400 Carya illinoinensis HOM05D007214 ORTHO05D008907 2.7e-19 100.1 227 32.2
FAN09G3859 Fragaria x ananassa HOM05D007214 ORTHO05D008907 2.7e-19 100.1 228 36.0
Gorai.001G258300 Gossypium raimondii HOM05D007214 ORTHO05D008907 5.9e-19 99.0 223 48.9
ClCG10G014670 Citrullus lanatus HOM05D062301 ORTHO05D008907 1.0e-18 98.2 226 50.4
CANSAT64G0721 Cannabis sativa HOM05D007214 ORTHO05D008907 3.0e-18 96.7 236 32.6
Potri.017G074100 Populus trichocarpa HOM05D007214 ORTHO05D008907 8.6e-18 95.1 227 32.2
FAN14G2712 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.5e-17 94.4 240 47.5
FAN02G1556 Fragaria x ananassa HOM05D007214 ORTHO05D008907 1.9e-17 94.0 228 35.5
LjContig00155g0009682 Lotus japonicus HOM05D007214 ORTHO05D008907 1.9e-17 94.0 233 33.9
Lalb_Chr10g0093331 Lupinus albus HOM05D007214 ORTHO05D008907 3.3e-17 93.2 243 30.5
Duzib187G0634 Durio zibethinus HOM05D007214 ORTHO05D008907 9.5e-17 91.7 231 37.2
Ciclev10012639m.g Citrus clementina HOM05D007214 ORTHO05D008907 1.6e-16 90.9 232 32.3
Gohir.A07G216951 Gossypium hirsutum HOM05D007214 ORTHO05D008907 3.6e-16 89.7 223 46.2
Glyma.06G189000 Glycine max HOM05D007214 ORTHO05D008907 4.7e-16 89.4 234 30.8
Phvul.008G153000 Phaseolus vulgaris HOM05D007214 ORTHO05D008907 1.4e-15 87.8 241 29.9
Medtr7g034275 Medicago truncatula HOM05D007214 ORTHO05D008907 5.8e-14 82.4 238 36.6
Potri.001G350100 Populus trichocarpa HOM05D007214 ORTHO05D008907 5.8e-14 82.4 228 28.5
TPR.G30823 Trifolium pratense HOM05D007214 ORTHO05D008907 8.3e-13 78.6 235 30.2
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea HOM05D007214 ORTHO05D008907 1.4e-12 77.8 228 34.6
CARHR292610 Cardamine hirsuta HOM05D007214 ORTHO05D008907 1.9e-12 77.4 223 39.0
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea HOM05D007214 ORTHO05D008907 7.0e-12 75.5 255 33.7
Dinv33685 Davidia involucrata HOM05D007214 ORTHO05D008907 2.0e-11 73.9 229 43.7
PSO063G2579 Papaver somniferum HOM05D007214 ORTHO05D008907 2.7e-11 73.6 225 28.0
Manes.17G117200 Manihot esculenta HOM05D007214 ORTHO05D008907 4.6e-11 72.8 225 28.4
CSS0043780 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.7e-10 70.9 227 30.0
AUR62018331 Chenopodium quinoa HOM05D007214 ORTHO05D008907 2.3e-10 70.5 235 34.0
Nn4g22956 Nelumbo nucifera HOM05D007214 ORTHO05D008907 2.3e-10 70.5 230 41.7
Nitab4.5_0001239g0030 Nicotiana tabacum HOM05D007214 ORTHO05D008907 3.9e-10 69.7 195 27.7
Gohir.D07G223900 Gossypium hirsutum HOM05D007214 ORTHO05D008907 5.0e-10 69.3 188 47.9
RcHm_v2.0_Chr2g0169771 Rosa chinensis HOM05D007214 ORTHO05D008907 6.6e-10 68.9 240 37.5
SalBow1G8362 Salvia bowleyana HOM05D007214 ORTHO05D008907 1.5e-09 67.8 241 41.1
CSS0027558 Camellia sinensis var. sinensis HOM05D007214 ORTHO05D008907 1.9e-09 67.4 227 33.5
MELO3C030968.2 Cucumis melo HOM05D007214 ORTHO05D008907 2.5e-09 67.0 65 52.3
QL02p079285 Quercus lobata HOM05D007214 ORTHO05D008907 2.5e-09 67.0 235 40.4
SGA_v2.0_scaffold135G34803 Striga asiatica HOM05D007214 ORTHO05D008907 3.3e-09 66.6 232 40.1
A06p40570 Brassica napus HOM05D007214 ORTHO05D008907 1.2e-08 64.7 247 31.6
Sabra16G0229500 Salix brachista HOM05D007214 ORTHO05D008907 2.1e-08 63.9 225 27.6
Aqoxy3G00863 Aquilegia oxysepala HOM05D007214 ORTHO05D008907 2.8e-08 63.5 227 25.1
Sc11g0006840 Simmondsia chinensis HOM05D007214 ORTHO05D008907 3.6e-08 63.2 59 57.6
MD09G1042000 Malus domestica HOM05D007214 ORTHO05D008907 4.7e-08 62.8 227 44.5
Sopen02g032170 Solanum pennellii HOM05D007214 ORTHO05D008907 8.1e-08 62.0 230 30.9
Psat3g038600 Pisum sativum HOM05D007214 ORTHO05D008907 1.1e-07 61.6 130 45.4
Ah.12g065280 Amaranthus hybridus HOM05D007214 ORTHO05D008907 2.3e-07 60.5 59 57.6
MBI15_g38192_MAGBIO Magnolia biondii HOM05D007214 ORTHO05D008907 4.0e-07 59.7 58 58.6
AL5G17980 Arabidopsis lyrata HOM05D007214 ORTHO05D008907 5.2e-07 59.3 228 39.9
AUR62030556 Chenopodium quinoa HOM05D007214 ORTHO05D008907 6.8e-07 58.9 227 26.9
Eucgr.J02159 Eucalyptus grandis HOM05D007214 ORTHO05D008907 6.8e-07 58.9 59 55.9
AT3G28370 Arabidopsis thaliana HOM05D007214 ORTHO05D008907 8.9e-07 58.5 223 36.3
Nitab4.5_0002265g0100 Nicotiana tabacum HOM05D007214 ORTHO05D008907 1.2e-06 58.2 197 42.1
Atru.chr8.2432 Acer truncatum HOM05D007214 ORTHO05D008907 1.5e-06 57.8 120 37.5
Manes.17G117300 Manihot esculenta HOM05D007214 ORTHO05D008907 1.5e-06 57.8 115 33.0
Prupe.3G275800 Prunus persica HOM05D007214 ORTHO05D008907 2.0e-06 57.4 227 38.8
Solyc02g087420.3 Solanum lycopersicum HOM05D007214 ORTHO05D008907 2.6e-06 57.0 230 29.6
THA.LOC104805424 Tarenaya hassleriana HOM05D007214 ORTHO05D008907 2.6e-06 57.0 116 33.6
CAN.G206.82 Capsicum annuum HOM05D007214 ORTHO05D008907 4.4e-06 56.2 233 37.8
BcaC06g30923 Brassica carinata HOM05D007214 ORTHO05D008907 7.5e-06 55.5 116 32.8
A06p40600 Brassica napus HOM05D007214 ORTHO05D008907 7.5e-06 55.5 224 33.5
BraA06t26979Z Brassica rapa HOM05D007214 ORTHO05D008907 7.5e-06 55.5 224 33.5
Cpa.g.sc14.68 Carica papaya HOM05D007214 ORTHO05D008907 7.5e-06 55.5 59 47.5
C07p37400 Brassica napus HOM05D007214 ORTHO05D008907 9.9e-06 55.1 224 34.4
DCAR_011179 Daucus carota HOM05D007214 ORTHO05D008907 9.9e-06 55.1 59 50.8


User provided reference genes

Program Settings