Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.1e-63 246.5 129 100.0
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.9e-19 98.2 123 54.5
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 4.9e-19 98.2 123 54.5
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 8.3e-19 97.4 123 54.5
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 5.0e-16 88.2 120 46.7
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 6.6e-16 87.8 103 56.3
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.3e-15 84.3 127 43.3
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 9.5e-15 84.0 116 48.3
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.2e-14 83.6 109 52.3
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.2e-14 83.6 109 52.3
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 1.2e-14 83.6 119 50.4
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 2.1e-14 82.8 119 44.5
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 3.6e-14 82.0 120 45.8
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 1.1e-13 80.5 115 45.2
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 1.8e-13 79.7 107 48.6
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.2e-12 77.0 98 42.9
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 3.4e-12 75.5 129 44.2
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 4.4e-12 75.1 117 49.6
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.4e-12 75.1 117 49.6
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 9.8e-12 73.9 112 45.5
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.3e-11 73.6 114 46.5
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.3e-11 73.6 114 48.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-11 73.2 101 47.5
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 2.9e-11 72.4 118 43.2
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.7e-11 72.0 117 47.0
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 3.7e-11 72.0 106 46.2
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 3.7e-11 72.0 126 39.7
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.7e-11 72.0 130 42.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 4.9e-11 71.6 130 40.8
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 6.4e-11 71.2 101 50.5
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 8.3e-11 70.9 109 45.9
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.1e-10 70.5 123 41.5
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 1.4e-10 70.1 134 44.8
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.9e-10 69.7 120 42.5
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.9e-10 69.7 115 42.6
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.4e-10 69.3 144 38.2
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 4.1e-10 68.6 110 43.6
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.1e-10 68.6 109 45.0
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 4.1e-10 68.6 117 41.9
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 4.1e-10 68.6 131 40.5
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 4.1e-10 68.6 139 41.7
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 7.0e-10 67.8 125 40.0
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 9.2e-10 67.4 121 42.1
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.2e-09 67.0 130 40.8
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.6e-09 66.6 119 36.1
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.5e-09 65.5 96 41.7
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 6.0e-09 64.7 92 45.7
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 6.0e-09 64.7 127 38.6
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 1.3e-08 63.5 126 38.9
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 1.3e-08 63.5 126 38.9
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 1.7e-08 63.2 114 39.5
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 2.3e-08 62.8 129 34.9
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 3.0e-08 62.4 102 46.1
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 3.0e-08 62.4 112 38.4
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 3.0e-08 62.4 132 35.6
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 3.9e-08 62.0 98 45.9
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.9e-08 62.0 111 38.7
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 8.6e-08 60.8 104 39.4
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.9e-07 59.7 121 43.0
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 1.9e-07 59.7 121 43.0
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.9e-07 59.7 123 40.7
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 1.9e-07 59.7 116 39.7
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 2.5e-07 59.3 98 46.9
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 2.5e-07 59.3 127 37.8
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 3.3e-07 58.9 105 38.1
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 4.3e-07 58.5 119 42.9
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 4.3e-07 58.5 106 41.5
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 9.5e-07 57.4 103 36.9
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 1.2e-06 57.0 103 41.7
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 1.6e-06 56.6 128 35.2
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 3.6e-06 55.5 107 36.4
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 6.2e-06 54.7 131 32.8
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 6.2e-06 54.7 103 35.9


User provided reference genes

Program Settings