Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 2.2e-124 449.1 247 100.0
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.6e-47 192.6 352 40.3
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.7e-41 173.7 239 48.5
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.3e-36 157.5 249 52.2
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.1e-35 154.5 249 51.8
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 3.2e-35 152.9 240 41.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 5.4e-35 152.1 256 44.5
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 9.3e-35 151.4 236 44.1
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.1e-34 150.2 265 39.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 6.0e-34 148.7 237 44.7
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 7.9e-34 148.3 239 40.6
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.0e-33 147.9 256 46.9
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 1.0e-33 147.9 237 43.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.3e-33 146.7 242 41.7
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 2.3e-33 146.7 247 40.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.9e-33 146.0 246 42.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 8.7e-33 144.8 242 40.5
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.1e-32 144.4 243 43.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.9e-32 143.7 242 41.7
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.9e-32 143.7 254 40.6
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.3e-32 142.5 245 43.7
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 7.3e-32 141.7 256 41.8
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 6.2e-31 138.7 238 41.6
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.2e-31 138.7 236 44.9
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 8.1e-31 138.3 238 42.0
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 8.1e-31 138.3 243 42.4
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.1e-30 137.9 242 43.8
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.4e-30 136.7 245 43.3
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.4e-30 136.7 261 39.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.4e-30 136.7 241 40.7
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 6.9e-30 135.2 250 40.8
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 6.9e-30 135.2 251 40.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.2e-29 134.4 252 39.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.6e-29 133.3 264 37.5
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.4e-29 132.9 243 39.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 4.5e-29 132.5 232 42.2
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.6e-29 131.7 258 36.0
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 9.9e-29 131.3 244 38.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 9.9e-29 131.3 234 39.3
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.7e-28 130.6 242 40.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.7e-28 130.6 231 43.3
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 4.9e-28 129.0 244 41.4
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 6.4e-28 128.6 237 42.2
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 2.4e-27 126.7 260 36.9
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 3.2e-27 126.3 254 44.9
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.2e-27 126.3 254 44.9
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.2e-27 126.3 258 36.0
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.5e-27 125.6 234 40.6
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 5.5e-27 125.6 245 40.4
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 7.1e-27 125.2 247 38.1
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 6.0e-26 122.1 264 41.3
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 7.9e-26 121.7 270 36.3
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 1.0e-25 121.3 233 39.5
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.3e-25 120.2 232 38.8
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.0e-25 119.8 291 35.7
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.0e-25 119.8 272 37.1
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.0e-25 119.8 242 40.1
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 8.7e-25 118.2 270 36.3
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 8.7e-25 118.2 285 35.8
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.5e-24 117.5 207 44.0
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 3.3e-24 116.3 253 37.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 5.6e-24 115.5 242 38.0
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 7.4e-24 115.2 237 38.4
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.4e-24 115.2 237 38.4
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 9.6e-24 114.8 240 39.6
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.6e-23 114.0 237 38.0
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.1e-23 113.6 143 49.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.1e-23 113.6 243 36.6
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.8e-23 113.2 133 51.1
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.4e-22 110.2 240 37.5
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 3.1e-22 109.8 231 38.5
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 5.3e-22 109.0 226 38.5
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.3e-22 109.0 239 34.3
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 6.9e-22 108.6 132 51.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 9.0e-22 108.2 232 37.9
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 9.0e-22 108.2 121 47.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.5e-21 107.5 245 35.9
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.0e-21 107.1 233 39.1
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.4e-21 106.3 253 34.4
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 5.8e-21 105.5 245 37.1
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.3e-20 104.4 121 48.8
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 4.9e-20 102.4 245 38.0
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 6.5e-20 102.1 237 35.4
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 6.5e-20 102.1 283 31.8
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.9e-19 100.5 126 48.4
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.7e-18 96.7 266 34.2
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 3.9e-17 92.8 246 35.4
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 3.9e-17 92.8 240 34.6
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 8.7e-17 91.7 246 33.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.9e-16 90.5 152 36.8
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 2.5e-16 90.1 240 34.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 3.3e-16 89.7 123 46.3
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 4.3e-16 89.4 253 32.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.6e-15 87.4 249 34.1
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 2.1e-15 87.0 212 32.5
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 6.3e-15 85.5 245 32.7
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 8.2e-15 85.1 246 32.5
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.4e-14 84.3 126 43.7
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 2.4e-14 83.6 312 28.2
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.3e-14 82.4 234 35.0
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 6.9e-14 82.0 236 33.5
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.4e-13 79.7 252 31.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 7.6e-13 78.6 198 31.3
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.7e-12 77.4 264 32.6
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.7e-12 77.4 248 33.1
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 2.9e-12 76.6 253 29.2
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 5.0e-12 75.9 136 40.4
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 8.4e-12 75.1 124 43.5
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 1.1e-11 74.7 246 30.9
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.6e-10 70.9 243 32.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.6e-10 70.9 243 32.9
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.1e-10 70.5 97 47.4
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.5e-08 64.3 249 28.5
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 9.7e-08 61.6 247 26.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 3.7e-07 59.7 214 34.1
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.7e-07 59.7 80 45.0
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.1e-06 56.2 229 28.8


User provided reference genes

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