Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019180 Sechium edule HOM05D006168 ORTHO05D007602 1.8e-76 289.3 155 100.0
ClCG01G014720 Citrullus lanatus HOM05D006168 ORTHO05D007602 1.4e-65 253.1 155 86.5
MELO3C002180.2 Cucumis melo HOM05D006168 ORTHO05D007602 9.2e-65 250.4 153 86.3
CsaV3_1G007610 Cucumis sativus L. HOM05D006168 ORTHO05D007602 6.0e-64 247.7 153 85.0
Gohir.A05G294800 Gossypium hirsutum HOM05D006168 ORTHO05D007602 6.4e-50 201.1 147 76.2
Gohir.D05G295400 Gossypium hirsutum HOM05D006168 ORTHO05D007602 1.6e-48 196.4 147 74.8
GSVIVG01024249001 Vitis vinifera HOM05D006168 ORTHO05D007602 3.5e-48 195.3 155 72.9
Duzib114G0883 Durio zibethinus HOM05D006168 ORTHO05D007602 6.0e-48 194.5 148 73.0
COL.COLO4_12167 Corchorus olitorius HOM05D006168 ORTHO05D007602 3.9e-47 191.8 150 72.0
Duzib128G1786 Durio zibethinus HOM05D006168 ORTHO05D007602 3.9e-47 191.8 147 72.1
CiPaw.16G075600 Carya illinoinensis HOM05D006168 ORTHO05D007602 1.9e-46 189.5 153 71.2
Nn3g18550 Nelumbo nucifera HOM05D006168 ORTHO05D007602 1.9e-46 189.5 151 69.5
Dinv03501 Davidia involucrata HOM05D006168 ORTHO05D007602 3.3e-46 188.7 156 68.6
Dinv03506 Davidia involucrata HOM05D006168 ORTHO05D007602 3.3e-46 188.7 156 68.6
Thecc.10G078900 Theobroma cacao HOM05D006168 ORTHO05D007602 4.3e-46 188.3 151 71.5
Gorai.009G312100 Gossypium raimondii HOM05D006168 ORTHO05D007602 1.3e-45 186.8 140 75.0
Cfa017805 Carpinus fangiana HOM05D006168 ORTHO05D007602 4.8e-45 184.9 135 73.3
QL10p033704 Quercus lobata HOM05D006168 ORTHO05D007602 4.8e-45 184.9 144 70.1
Sabra04G0045100 Salix brachista HOM05D006168 ORTHO05D007602 6.2e-45 184.5 143 72.7
Potri.004G067300 Populus trichocarpa HOM05D006168 ORTHO05D007602 2.4e-44 182.6 143 72.0
Atru.chr9.17 Acer truncatum HOM05D006168 ORTHO05D007602 4.0e-44 181.8 137 71.5
TWI81G0790 Tripterygium wilfordii HOM05D006168 ORTHO05D007602 4.0e-44 181.8 153 69.3
Prupe.5G244900 Prunus persica HOM05D006168 ORTHO05D007602 5.3e-44 181.4 155 69.7
Lsat_1_v5_gn_2_6441 Lactuca sativa HOM05D006168 ORTHO05D007602 1.2e-43 180.3 151 66.9
Lj5g0014337 Lotus japonicus HOM05D006168 ORTHO05D007602 1.2e-43 180.3 154 64.9
Manes.02G226600 Manihot esculenta HOM05D006168 ORTHO05D007602 1.2e-43 180.3 146 69.9
Hund08905 Selenicereus undatus HOM05D006168 ORTHO05D007602 3.4e-43 178.7 151 65.6
ECA238G2000 Erigeron canadensis HOM05D006168 ORTHO05D007602 4.4e-43 178.3 153 64.1
Ah.14g084700 Amaranthus hybridus HOM05D006168 ORTHO05D007602 5.8e-43 177.9 148 66.9
CDE04G1298 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 1.3e-42 176.8 155 65.8
TAR629G1867 Trochodendron aralioides HOM05D006168 ORTHO05D007602 1.7e-42 176.4 149 65.8
MBI06_g12548_MAGBIO Magnolia biondii HOM05D006168 ORTHO05D007602 4.9e-42 174.9 154 63.6
DCAR_011406 Daucus carota HOM05D006168 ORTHO05D007602 6.4e-42 174.5 141 68.8
HanXRQChr14g0428251 Helianthus annuus HOM05D006168 ORTHO05D007602 6.4e-42 174.5 152 64.5
MD06G1240400 Malus domestica HOM05D006168 ORTHO05D007602 6.4e-42 174.5 148 67.6
Aqoxy2G03978 Aquilegia oxysepala HOM05D006168 ORTHO05D007602 1.4e-41 173.3 142 65.5
EL10Ac8g18962 Beta vulgaris HOM05D006168 ORTHO05D007602 1.4e-41 173.3 147 63.9
Eucgr.H00657 Eucalyptus grandis HOM05D006168 ORTHO05D007602 1.4e-41 173.3 150 64.0
MD14G1246600 Malus domestica HOM05D006168 ORTHO05D007602 1.4e-41 173.3 143 69.2
Rhsim12G0137000 Rhododendron simsii HOM05D006168 ORTHO05D007602 1.9e-41 172.9 135 71.1
PGR083G1429 Punica granatum HOM05D006168 ORTHO05D007602 2.4e-41 172.6 158 62.7
RcHm_v2.0_Chr7g0176961 Rosa chinensis HOM05D006168 ORTHO05D007602 9.3e-41 170.6 152 66.4
VMungo0720G1915 Vigna mungo HOM05D006168 ORTHO05D007602 9.3e-41 170.6 155 62.6
BraA03t12572Z Brassica rapa HOM05D006168 ORTHO05D007602 2.1e-40 169.5 150 65.3
BolC3t16418H Brassica oleracea HOM05D006168 ORTHO05D007602 3.5e-40 168.7 151 65.6
CANSAT35G1332 Cannabis sativa HOM05D006168 ORTHO05D007602 4.6e-40 168.3 147 65.3
AUR62028326 Chenopodium quinoa HOM05D006168 ORTHO05D007602 4.6e-40 168.3 151 64.2
FAN04G0186 Fragaria x ananassa HOM05D006168 ORTHO05D007602 4.6e-40 168.3 154 66.9
CDE08G0644 Ceratophyllum demersum HOM05D006168 ORTHO05D007602 6.0e-40 167.9 157 62.4
AUR62025335 Chenopodium quinoa HOM05D006168 ORTHO05D007602 7.8e-40 167.5 135 68.1
Aa31LG5G15370 Aethionema arabicum HOM05D006168 ORTHO05D007602 1.0e-39 167.2 150 65.3
ECA238G2968 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.0e-39 165.6 145 62.8
ECA238G0114 Erigeron canadensis HOM05D006168 ORTHO05D007602 5.1e-39 164.9 148 61.5
ECA238G1897 Erigeron canadensis HOM05D006168 ORTHO05D007602 5.1e-39 164.9 148 61.5
Peaxi162Scf00643g00537 Petunia axillaris HOM05D006168 ORTHO05D007602 8.7e-39 164.1 149 63.1
Phvul.L006301 Phaseolus vulgaris HOM05D006168 ORTHO05D007602 1.1e-38 163.7 155 60.6
FAN18G0639 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.5e-38 163.3 155 66.5
FvH4_5g18550 Fragaria vesca HOM05D006168 ORTHO05D007602 1.9e-38 162.9 155 66.5
Ca_09928_v3 Cicer arietinum L. HOM05D006168 ORTHO05D007602 2.5e-38 162.5 168 58.3
Solyc06g072170.2 Solanum lycopersicum HOM05D006168 ORTHO05D007602 5.6e-38 161.4 153 61.4
Sopen06g028470 Solanum pennellii HOM05D006168 ORTHO05D007602 5.6e-38 161.4 153 61.4
ATR0124G011 Amborella trichopoda HOM05D006168 ORTHO05D007602 7.3e-38 161.0 142 62.7
PGSC0003DMG400027059 Solanum tuberosum HOM05D006168 ORTHO05D007602 1.3e-37 160.2 153 60.1
Glyma.10G174000 Glycine max HOM05D006168 ORTHO05D007602 2.1e-37 159.5 156 59.6
Glyma.20G216400 Glycine max HOM05D006168 ORTHO05D007602 2.1e-37 159.5 156 60.3
Medtr1g077570 Medicago truncatula HOM05D006168 ORTHO05D007602 2.1e-37 159.5 163 59.5
MSTRG.4316 Avicennia marina HOM05D006168 ORTHO05D007602 4.8e-37 158.3 166 58.4
CARHR079400 Cardamine hirsuta HOM05D006168 ORTHO05D007602 8.1e-37 157.5 148 62.8
AL3G15460 Arabidopsis lyrata HOM05D006168 ORTHO05D007602 1.1e-36 157.1 148 62.8
FAN08G3581 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.1e-36 157.1 154 64.3
Migut.D02066 Erythranthe guttata HOM05D006168 ORTHO05D007602 1.4e-36 156.8 158 58.2
PSO063G5228 Papaver somniferum HOM05D006168 ORTHO05D007602 2.4e-36 156.0 156 58.3
Sp3g03900 Schrenkiella parvula HOM05D006168 ORTHO05D007602 4.0e-36 155.2 148 62.8
vmacro16399 Vaccinium macrocarpon HOM05D006168 ORTHO05D007602 4.0e-36 155.2 167 57.5
Lalb_Chr21g0311691 Lupinus albus HOM05D006168 ORTHO05D007602 5.3e-36 154.8 156 58.3
SGA_v2.0_scaffold387G50509 Striga asiatica HOM05D006168 ORTHO05D007602 6.9e-36 154.5 157 58.0
Ciclev10022597m.g Citrus clementina HOM05D006168 ORTHO05D007602 1.2e-35 153.7 164 57.9
Cc02_g29290 Coffea canephora HOM05D006168 ORTHO05D007602 1.2e-35 153.7 174 54.6
Thhalv10021722m.g Eutrema salsugineum HOM05D006168 ORTHO05D007602 1.2e-35 153.7 148 62.2
AT3G05070 Arabidopsis thaliana HOM05D006168 ORTHO05D007602 1.5e-35 153.3 148 62.2
CSS0046866 Camellia sinensis var. sinensis HOM05D006168 ORTHO05D007602 2.6e-35 152.5 96 82.3
C05p62160 Brassica napus HOM05D006168 ORTHO05D007602 3.4e-35 152.1 150 61.3
BolC5t34874H Brassica oleracea HOM05D006168 ORTHO05D007602 3.4e-35 152.1 150 61.3
Psat6g054520 Pisum sativum HOM05D006168 ORTHO05D007602 3.4e-35 152.1 166 55.4
unitig_21.g20432 Utricularia gibba HOM05D006168 ORTHO05D007602 7.6e-35 151.0 156 59.0
Carub.0003s0432 Capsella rubella HOM05D006168 ORTHO05D007602 1.3e-34 150.2 153 58.2
A05p42500 Brassica napus HOM05D006168 ORTHO05D007602 4.9e-34 148.3 150 59.3
BraA05t23002Z Brassica rapa HOM05D006168 ORTHO05D007602 4.9e-34 148.3 150 59.3
THA.LOC104818656 Tarenaya hassleriana HOM05D006168 ORTHO05D007602 8.4e-34 147.5 154 60.4
Sed0015845 Sechium edule HOM05D006168 ORTHO05D007602 3.2e-33 145.6 155 58.7
HPP92_020852 Vanilla planifolia HOM05D006168 ORTHO05D007602 3.5e-32 142.1 143 60.1
BcaC05g29992 Brassica carinata HOM05D006168 ORTHO05D007602 5.1e-31 138.3 152 55.9
Haze_18408 Corylus avellana HOM05D006168 ORTHO05D007602 1.1e-30 137.1 82 82.9
SEGI_05677 Sequoiadendron giganteum HOM05D006168 ORTHO05D007602 7.4e-30 134.4 158 50.0
Oeu034422.1 Olea europaea HOM05D006168 ORTHO05D007602 9.6e-30 134.0 136 59.6
CAN.G65.65 Capsicum annuum HOM05D006168 ORTHO05D007602 1.6e-29 133.3 100 66.0
RcHm_v2.0_Chr5g0006211 Rosa chinensis HOM05D006168 ORTHO05D007602 2.8e-29 132.5 148 54.7
AagrBONN_evm.TU.Sc2ySwM_368.389 Anthoceros agrestis HOM05D006168 ORTHO05D007602 4.0e-28 128.6 134 56.7
Zm00001eb228960 Zea mays HOM05D006168 ORTHO05D007602 4.0e-28 128.6 175 48.6
Os06g0730800 Oryza sativa ssp. japonica HOM05D006168 ORTHO05D007602 5.8e-27 124.8 175 45.7
Pp3c19_22150 Physcomitrium patens HOM05D006168 ORTHO05D007602 1.0e-26 124.0 143 53.1
arahy.Tifrunner.gnm1.ann1.52MA05 Arachis hypogaea HOM05D006168 ORTHO05D007602 2.5e-25 119.4 139 51.8
FvH4_3g03920 Fragaria vesca HOM05D006168 ORTHO05D007602 1.6e-24 116.7 146 51.4
FAN16G2203 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-24 116.7 153 52.3
FAN25G2877 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.6e-24 116.7 151 51.7
FAN11G1802 Fragaria x ananassa HOM05D006168 ORTHO05D007602 2.7e-24 115.9 146 51.4
SalBow8G4549 Salvia bowleyana HOM05D006168 ORTHO05D007602 2.7e-24 115.9 147 52.4
Nitab4.5_0000477g0160 Nicotiana tabacum HOM05D006168 ORTHO05D007602 7.9e-24 114.4 107 59.8
Nitab4.5_0002771g0020 Nicotiana tabacum HOM05D006168 ORTHO05D007602 7.9e-24 114.4 84 69.0
FAN21G2556 Fragaria x ananassa HOM05D006168 ORTHO05D007602 1.0e-23 114.0 151 52.3
BcaB04g19282 Brassica carinata HOM05D006168 ORTHO05D007602 3.0e-23 112.5 86 69.8
Mapoly0133s0024 Marchantia polymorpha HOM05D006168 ORTHO05D007602 3.9e-23 112.1 136 52.2
SMO147G0110 Selaginella moellendorffii HOM05D006168 ORTHO05D007602 3.7e-21 105.5 141 51.8
FAN13G0455 Fragaria x ananassa HOM05D006168 ORTHO05D007602 6.2e-21 104.8 108 59.3
Sc15g0000010 Simmondsia chinensis HOM05D006168 ORTHO05D007602 3.1e-20 102.4 98 57.1
Potri.017G154100 Populus trichocarpa HOM05D006168 ORTHO05D007602 9.0e-20 100.9 88 64.8
TPR.G35595 Trifolium pratense HOM05D006168 ORTHO05D007602 7.1e-17 91.3 105 55.2
Cre12.g518300 Chlamydomonas reinhardtii HOM05D006168 ORTHO05D007602 2.1e-16 89.7 138 44.9
CBR_g57849 Chara braunii HOM05D006168 ORTHO05D007602 3.5e-16 89.0 100 51.0
arahy.Tifrunner.gnm1.ann1.S1M3RU Arachis hypogaea HOM05D006168 ORTHO05D007602 4.6e-16 88.6 97 52.6
TPR.G8871 Trifolium pratense HOM05D006168 ORTHO05D007602 1.8e-15 86.7 55 80.0
BcaC01g04336 Brassica carinata HOM05D006168 ORTHO05D007602 4.3e-14 82.0 112 50.0
MCO12G027 Micromonas commoda HOM05D006168 ORTHO05D007602 5.0e-10 68.6 135 35.6
A03p33970 Brassica napus HOM05D006168 ORTHO05D007602 9.4e-09 64.3 74 54.1
C03p41350 Brassica napus HOM05D006168 ORTHO05D007602 7.4e-06 54.7 111 41.4
Cpa.g.sc117.34 Carica papaya HOM05D006168 ORTHO05D007602 9.7e-06 54.3 52 65.4


User provided reference genes

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