Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 6.6e-85 317.4 166 100.0
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.3e-27 127.1 166 47.6
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 3.4e-25 119.0 173 42.2
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.3e-24 117.1 184 41.3
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 2.9e-24 115.9 173 40.5
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 6.5e-24 114.8 172 40.7
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 1.4e-23 113.6 174 39.7
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.2e-22 110.5 169 43.2
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 3.0e-21 105.9 133 42.9
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 3.3e-20 102.4 165 39.4
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 4.8e-19 98.6 183 35.0
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.1e-18 97.4 183 35.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 3.1e-18 95.9 185 34.1
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 6.9e-18 94.7 184 34.2
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 9.0e-18 94.4 106 46.2
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 9.0e-18 94.4 146 37.7
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.2e-17 94.0 187 33.7
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 1.2e-17 94.0 161 38.5
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 2.0e-17 93.2 140 40.7
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 2.6e-17 92.8 187 33.7
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 5.9e-17 91.7 197 34.5
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 7.7e-17 91.3 176 38.1
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 1.0e-16 90.9 130 39.2
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 1.0e-16 90.9 138 37.0
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 5.0e-16 88.6 135 36.3
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 1.1e-15 87.4 194 35.6
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 3.2e-15 85.9 160 35.6
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 4.2e-15 85.5 127 39.4
PSO063G5504 Papaver somniferum HOM05D007511 ORTHO05D003753 9.4e-15 84.3 149 35.6
TPR.G24583 Trifolium pratense HOM05D007511 ORTHO05D003753 9.4e-15 84.3 135 40.0
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 9.4e-15 84.3 189 33.9
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 1.2e-14 84.0 129 38.0
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 1.6e-14 83.6 154 36.4
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 4.6e-14 82.0 193 34.2
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 6.1e-14 81.6 127 38.6
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 7.9e-14 81.3 84 46.4
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.8e-13 80.1 79 48.1
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 1.8e-13 80.1 176 33.0
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 8.8e-13 77.8 183 30.1
Aa31LG11G12060 Aethionema arabicum HOM05D007511 ORTHO05D003753 1.5e-12 77.0 157 33.8
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 1.5e-12 77.0 171 39.2
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 3.3e-12 75.9 172 35.5
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 4.3e-12 75.5 158 36.7
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 5.7e-12 75.1 97 38.1
BcaC03g13529 Brassica carinata HOM05D007511 ORTHO05D003753 7.4e-12 74.7 126 38.9
BolC2t06828H Brassica oleracea HOM05D007511 ORTHO05D003753 7.4e-12 74.7 126 38.9
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 7.4e-12 74.7 158 34.8
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 2.2e-11 73.2 161 32.9
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 2.2e-11 73.2 128 35.9
Sp6g26630 Schrenkiella parvula HOM05D007511 ORTHO05D003753 3.7e-11 72.4 153 33.3
CARHR195590 Cardamine hirsuta HOM05D007511 ORTHO05D003753 4.8e-11 72.0 133 36.1
AUR62029588 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.8e-11 72.0 163 31.3
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 8.2e-11 71.2 133 34.6
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 8.2e-11 71.2 169 35.5
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 8.2e-11 71.2 67 49.3
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 8.2e-11 71.2 138 33.3
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 8.2e-11 71.2 162 32.7
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 8.2e-11 71.2 143 33.6
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 1.8e-10 70.1 138 34.1
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 2.4e-10 69.7 164 30.5
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 2.4e-10 69.7 141 36.2
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 3.1e-10 69.3 62 50.0
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 3.1e-10 69.3 89 41.6
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 4.1e-10 68.9 169 34.9
Sopen10g009620 Solanum pennellii HOM05D007511 ORTHO05D025904 4.1e-10 68.9 84 41.7
THA.LOC104802898 Tarenaya hassleriana HOM05D007511 ORTHO05D003753 4.1e-10 68.9 153 32.7
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 5.3e-10 68.6 193 31.1
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 6.9e-10 68.2 153 32.7
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 6.9e-10 68.2 169 32.5
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 9.1e-10 67.8 167 34.1
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 9.1e-10 67.8 166 31.3
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 9.1e-10 67.8 97 39.2
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 9.1e-10 67.8 67 46.3
Solyc10g024480.1 Solanum lycopersicum HOM05D007511 ORTHO05D003753 1.2e-09 67.4 84 40.5
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 1.5e-09 67.0 179 31.3
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 1.5e-09 67.0 167 32.9
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 1.5e-09 67.0 146 30.1
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 2.0e-09 66.6 174 31.0
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 2.0e-09 66.6 114 32.5
BcaB08g36759 Brassica carinata HOM05D007511 ORTHO05D003753 2.6e-09 66.2 136 34.6
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 2.6e-09 66.2 62 53.2
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 4.5e-09 65.5 97 39.2
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 7.7e-09 64.7 66 43.9
Hma1.2p1_0353F.1_g133330 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 7.7e-09 64.7 105 35.2
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 7.7e-09 64.7 157 31.8
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 1.0e-08 64.3 127 33.9
ATR1001G015 Amborella trichopoda HOM05D007511 ORTHO05D003753 1.3e-08 63.9 131 33.6
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 1.3e-08 63.9 165 31.5
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.3e-08 63.9 63 44.4
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.7e-08 63.5 157 31.8
Lsat_1_v5_gn_7_35641 Lactuca sativa HOM05D007511 ORTHO05D003753 2.2e-08 63.2 65 44.6
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 2.9e-08 62.8 153 29.4
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 2.9e-08 62.8 171 30.4
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 5.0e-08 62.0 157 31.8
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 6.5e-08 61.6 86 38.4
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 8.5e-08 61.2 118 30.5
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 8.5e-08 61.2 118 30.5
BraA10t44242Z Brassica rapa HOM05D007511 ORTHO05D003753 8.5e-08 61.2 137 32.1
Phvul.010G032800 Phaseolus vulgaris HOM05D007511 ORTHO05D003753 8.5e-08 61.2 107 34.6
A10p21820 Brassica napus HOM05D007511 ORTHO05D003753 1.1e-07 60.8 137 32.1
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 1.4e-07 60.5 147 30.6
BolC9t58796H Brassica oleracea HOM05D007511 ORTHO05D003753 1.4e-07 60.5 157 29.9
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 1.4e-07 60.5 121 33.1
BolC3t13471H Brassica oleracea HOM05D007511 ORTHO05D003753 1.9e-07 60.1 118 29.7
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 2.5e-07 59.7 118 30.5
BcaC04g18776 Brassica carinata HOM05D007511 ORTHO05D003753 2.5e-07 59.7 157 29.3
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 2.5e-07 59.7 118 30.5
C09p59570 Brassica napus HOM05D007511 ORTHO05D003753 2.5e-07 59.7 157 29.3
QL10p041669 Quercus lobata HOM05D001418 ORTHO05D003753 5.5e-07 58.5 84 35.7
QL10p041870 Quercus lobata HOM05D001418 ORTHO05D003753 5.5e-07 58.5 84 35.7
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 7.2e-07 58.2 155 29.0
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 9.4e-07 57.8 182 28.6
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 1.6e-06 57.0 109 33.9
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 2.1e-06 56.6 59 42.4
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 3.6e-06 55.8 61 41.0
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 3.6e-06 55.8 183 27.3
Gorai.007G066200 Gossypium raimondii HOM05D001418 ORTHO05D003753 4.7e-06 55.5 61 41.0
Cfa021634 Carpinus fangiana HOM05D001418 ORTHO05D003753 6.1e-06 55.1 59 45.8
Cfa021635 Carpinus fangiana HOM05D001418 ORTHO05D003753 6.1e-06 55.1 59 45.8
Gohir.A11G057300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 6.1e-06 55.1 61 41.0
Gohir.D11G061300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 6.1e-06 55.1 61 41.0
Lj4g0007966 Lotus japonicus HOM05D001418 ORTHO05D003753 6.1e-06 55.1 58 43.1
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 6.1e-06 55.1 178 30.3
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 6.1e-06 55.1 164 27.4
Zm00001eb202060 Zea mays HOM05D001418 ORTHO05D003753 6.1e-06 55.1 69 37.7
Haze_25311 Corylus avellana HOM05D001418 ORTHO05D003753 7.9e-06 54.7 65 41.5


User provided reference genes

Program Settings