Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019148 Sechium edule HOM05D008168 ORTHO05D010284 9.0e-198 693.3 340 100.0
Dinv06690 Davidia involucrata HOM05D008168 ORTHO05D010284 7.9e-93 344.7 181 95.6
TPR.G35326 Trifolium pratense HOM05D008168 ORTHO05D010284 1.1e-91 340.9 181 95.0
CiPaw.12G057800 Carya illinoinensis HOM05D008168 ORTHO05D010284 5.6e-91 338.6 179 95.0
Actinidia34824 Actinidia chinensis HOM05D008168 ORTHO05D010284 6.5e-87 325.1 181 90.6
Lsat_1_v5_gn_5_185960 Lactuca sativa HOM05D008168 ORTHO05D010284 8.4e-87 324.7 174 93.1
HanXRQChr08g0236051 Helianthus annuus HOM05D008168 ORTHO05D010284 3.0e-84 316.2 169 93.5
HanXRQChr01g0029671 Helianthus annuus HOM05D008168 ORTHO05D010284 3.9e-84 315.8 180 88.9
Cpa.g.sc263.12 Carica papaya HOM05D008168 ORTHO05D010284 2.6e-80 303.1 157 94.9
FAN20G1169 Fragaria x ananassa HOM05D008168 ORTHO05D010284 3.0e-76 289.7 357 52.7
Nitab4.5_0001761g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.2e-71 273.5 174 81.0
Sp3g25580 Schrenkiella parvula HOM05D008168 ORTHO05D010284 6.1e-69 265.4 181 77.9
AT2G07641 Arabidopsis thaliana HOM05D008168 ORTHO05D010284 2.5e-67 260.0 342 50.6
Nitab4.5_0000172g2220 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.3e-67 259.2 186 74.2
CsaV3_6G025200 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.5e-59 234.2 116 97.4
CsaV3_6G025280 Cucumis sativus L. HOM05D008168 ORTHO05D010284 1.5e-59 234.2 116 97.4
CAN.G1632.16 Capsicum annuum HOM05D008168 ORTHO05D010284 1.7e-58 230.7 121 92.6
CAN.G298.7 Capsicum annuum HOM05D008168 ORTHO05D010284 1.7e-58 230.7 121 92.6
unitig_87.g27979 Utricularia gibba HOM05D008168 ORTHO05D010284 2.8e-58 229.9 121 90.9
FAN26G1478 Fragaria x ananassa HOM05D008168 ORTHO05D010284 3.8e-55 219.5 264 54.5
Sp5g20300 Schrenkiella parvula HOM05D008168 ORTHO05D010284 2.5e-54 216.9 181 66.3
CsaV3_6G024000 Cucumis sativus L. HOM05D008168 ORTHO05D010284 8.0e-53 211.8 187 62.6
Nitab4.5_0004030g0020 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.8e-52 210.7 115 88.7
BraSC159t45716Z Brassica rapa HOM05D008168 ORTHO05D010284 7.5e-51 205.3 118 89.8
Gohir.A03G133725 Gossypium hirsutum HOM05D008168 ORTHO05D010284 8.2e-50 201.8 141 75.2
MBI05_g05357_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 4.1e-49 199.5 139 75.5
Nitab4.5_0000127g0080 Nicotiana tabacum HOM05D008168 ORTHO05D010284 1.9e-46 190.7 136 74.3
EL10Ac7g17837 Beta vulgaris HOM05D008168 ORTHO05D010284 4.4e-43 179.5 116 77.6
Nitab4.5_0000788g0030 Nicotiana tabacum HOM05D008168 ORTHO05D010284 9.1e-41 171.8 176 60.8
Nitab4.5_0001919g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.0e-40 170.6 115 79.1
MBI10_g03713_MAGBIO Magnolia biondii HOM05D008168 ORTHO05D010284 2.7e-37 160.2 128 71.9
RcHm_v2.0_MTg0498271 Rosa chinensis HOM05D008168 ORTHO05D010284 2.8e-34 150.2 278 42.4
Thecc.08G162700 Theobroma cacao HOM05D008168 ORTHO05D010284 1.2e-29 134.8 93 69.9
CDE02G1379 Ceratophyllum demersum HOM05D008168 ORTHO05D010284 4.0e-28 129.8 96 71.9
Lsat_1_v5_gn_3_75761 Lactuca sativa HOM05D008168 ORTHO05D010284 7.5e-27 125.6 62 95.2
BraSC54t46354Z Brassica rapa HOM05D008168 ORTHO05D010284 1.7e-23 114.4 73 79.5
Nitab4.5_0002558g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 4.7e-21 106.3 54 92.6
Nitab4.5_0006806g0090 Nicotiana tabacum HOM05D008168 ORTHO05D010284 2.2e-18 97.4 55 87.3
AUR62043793 Chenopodium quinoa HOM05D008168 ORTHO05D010284 5.4e-17 92.8 51 88.2
AUR62043904 Chenopodium quinoa HOM05D008168 ORTHO05D010284 5.4e-17 92.8 51 88.2
AUR62043912 Chenopodium quinoa HOM05D008168 ORTHO05D010284 5.4e-17 92.8 51 88.2
BraSC48t46341Z Brassica rapa HOM05D008168 ORTHO05D010284 6.0e-16 89.4 46 91.3
Phvul.011G101750 Phaseolus vulgaris HOM05D008168 ORTHO05D010284 2.2e-10 70.9 37 86.5
Nitab4.5_0000733g0240 Nicotiana tabacum HOM05D008168 ORTHO05D010284 7.1e-09 65.9 59 64.4


User provided reference genes

Program Settings