Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 2.8e-83 312.0 166 100.0
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 3.1e-58 228.8 151 81.5
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 3.9e-45 185.3 160 66.2
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.3e-43 180.3 127 73.2
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 2.8e-43 179.1 165 64.2
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 1.1e-42 177.2 139 69.1
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 9.9e-41 170.6 163 58.9
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 9.9e-41 170.6 127 70.9
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 2.2e-40 169.5 164 54.9
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 3.8e-40 168.7 143 67.1
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 1.1e-39 167.2 165 52.1
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 3.2e-39 165.6 127 69.3
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 7.1e-39 164.5 164 59.8
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 2.1e-38 162.9 171 58.5
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 6.0e-38 161.4 132 55.3
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 2.3e-37 159.5 133 66.2
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 2.3e-37 159.5 117 72.6
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 8.7e-37 157.5 160 59.4
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 1.5e-36 156.8 130 65.4
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.5e-36 156.8 140 63.6
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 4.3e-36 155.2 153 51.0
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.6e-35 153.3 139 52.5
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 1.6e-35 153.3 149 51.0
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 2.1e-35 152.9 139 52.5
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 3.7e-35 152.1 139 52.5
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 3.7e-35 152.1 129 62.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 4.8e-35 151.8 165 49.7
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 1.1e-34 150.6 134 59.7
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 1.1e-34 150.6 132 51.5
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 1.8e-34 149.8 125 56.0
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 4.0e-34 148.7 120 67.5
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 5.3e-34 148.3 143 60.1
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 6.9e-34 147.9 133 51.1
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 9.0e-34 147.5 165 48.5
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 1.2e-33 147.1 127 55.9
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 2.0e-33 146.4 159 49.7
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 3.4e-33 145.6 133 54.9
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 5.8e-33 144.8 140 62.9
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 7.6e-33 144.4 129 62.8
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 1.7e-32 143.3 125 60.0
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.7e-32 143.3 144 52.1
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 2.2e-32 142.9 131 52.7
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 4.9e-32 141.7 124 50.0
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 6.5e-32 141.4 163 44.8
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 1.1e-31 140.6 109 62.4
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 1.9e-31 139.8 119 65.5
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 4.2e-31 138.7 95 65.3
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.2e-31 138.7 148 58.1
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 9.3e-31 137.5 80 78.8
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 1.2e-30 137.1 140 50.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 6.0e-30 134.8 129 51.2
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 1.8e-29 133.3 133 47.4
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.3e-29 132.9 114 65.8
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 8.7e-29 131.0 136 57.4
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 4.3e-28 128.6 132 59.8
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.3e-27 127.1 158 45.6
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 6.2e-27 124.8 182 40.7
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 8.2e-27 124.4 95 70.5
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 1.4e-26 123.6 105 65.7
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 2.4e-26 122.9 98 55.1
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 3.1e-26 122.5 114 63.2
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 5.3e-26 121.7 140 45.0
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 6.9e-26 121.3 93 73.1
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 6.9e-26 121.3 81 65.4
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 2.6e-25 119.4 154 48.1
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 1.3e-24 117.1 91 72.5
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 2.9e-24 115.9 151 46.4
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 2.9e-24 115.9 131 49.6
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 6.5e-24 114.8 87 57.5
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 1.1e-23 114.0 155 43.2
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 2.7e-22 109.4 100 63.0
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 1.8e-21 106.7 113 61.1
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 1.1e-20 104.0 81 74.1
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 1.5e-20 103.6 131 48.9
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 3.7e-19 99.0 134 50.7
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 3.7e-19 99.0 131 49.6
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 4.8e-19 98.6 112 50.9
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.1e-18 97.4 127 48.8
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 1.1e-18 97.4 131 48.1
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.1e-18 97.4 101 58.4
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 3.1e-18 95.9 131 47.3
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 4.1e-18 95.5 84 66.7
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 6.9e-18 94.7 99 59.6
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.0e-17 93.2 68 60.3
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 3.4e-17 92.4 122 40.2
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 6.5e-16 88.2 97 55.7
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 6.5e-16 88.2 188 32.4
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.4e-15 87.0 84 60.7
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 3.6e-14 82.4 88 42.0
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 7.4e-12 74.7 42 73.8
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 4.1e-10 68.9 92 50.0
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 7.2e-07 58.2 64 40.6


User provided reference genes

Program Settings