Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019056 Sechium edule HOM05D000786 ORTHO05D000779 1.2e-52 209.5 107 100.0
ClCG06G009930 Citrullus lanatus HOM05D000786 ORTHO05D000779 1.5e-29 132.9 106 64.2
MELO3C008511.2 Cucumis melo HOM05D000786 ORTHO05D000779 2.8e-28 128.6 108 63.9
ClCG10G005480 Citrullus lanatus HOM05D000786 ORTHO05D000779 3.1e-27 125.2 108 63.9
CsaV3_3G005210 Cucumis sativus L. HOM05D000786 ORTHO05D000779 1.5e-26 122.9 107 58.9
MELO3C025388.2 Cucumis melo HOM05D000786 ORTHO05D000779 2.6e-26 122.1 106 60.4
CsaV3_2G011280 Cucumis sativus L. HOM05D000786 ORTHO05D000779 6.4e-25 117.5 108 58.3
Haze_04084 Corylus avellana HOM05D000786 ORTHO05D000779 3.0e-14 82.0 106 41.5
Cfa006682 Carpinus fangiana HOM05D000786 ORTHO05D000779 3.3e-13 78.6 109 40.4
MD04G1195600 Malus domestica HOM05D000786 ORTHO05D000779 6.2e-12 74.3 125 36.8
Prupe.6G315400 Prunus persica HOM05D000786 ORTHO05D000779 4.5e-10 68.2 117 39.3
CiPaw.08G156800 Carya illinoinensis HOM05D000786 ORTHO05D000779 2.9e-09 65.5 108 39.8
TWI12G0435 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 6.5e-09 64.3 64 50.0
MD12G1207900 Malus domestica HOM05D000786 ORTHO05D000779 8.4e-09 63.9 123 36.6
Atru.chr2.141 Acer truncatum HOM05D000786 ORTHO05D000779 1.4e-08 63.2 65 44.6
TAR365G1099 Trochodendron aralioides HOM05D000786 ORTHO05D000779 1.4e-08 63.2 100 37.0
ClCG03G017660 Citrullus lanatus HOM05D032089 ORTHO05D000779 2.5e-08 62.4 62 45.2
Cpa.g.sc18.2 Carica papaya HOM05D000786 ORTHO05D000779 3.2e-08 62.0 86 39.5
MBI18_g24950_MAGBIO Magnolia biondii HOM05D000786 ORTHO05D000779 5.5e-08 61.2 98 37.8
THA.LOC104818741 Tarenaya hassleriana HOM05D000786 ORTHO05D000779 7.1e-08 60.8 114 32.5
BraA01t04489Z Brassica rapa HOM05D000786 ORTHO05D000779 9.3e-08 60.5 113 32.7
CiPaw.07G027400 Carya illinoinensis HOM05D000786 ORTHO05D000779 1.2e-07 60.1 103 37.9
MELO3C017928.2 Cucumis melo HOM05D000786 ORTHO05D000779 1.2e-07 60.1 39 61.5
RcHm_v2.0_Chr3g0456821 Rosa chinensis HOM05D013158 ORTHO05D000779 1.2e-07 60.1 138 31.2
Ciclev10003628m.g Citrus clementina HOM05D000786 ORTHO05D000779 1.6e-07 59.7 52 53.8
Sp3g04610 Schrenkiella parvula HOM05D000786 ORTHO05D000779 1.6e-07 59.7 112 33.9
TPR.G1606 Trifolium pratense HOM05D000786 ORTHO05D000779 1.6e-07 59.7 112 30.4
Carub.0003s0508 Capsella rubella HOM05D000786 ORTHO05D000779 2.1e-07 59.3 113 33.6
Cpa.g.sc48.139 Carica papaya HOM05D000786 ORTHO05D000779 2.7e-07 58.9 114 34.2
CsaV3_4G001090 Cucumis sativus L. HOM05D000786 ORTHO05D000779 2.7e-07 58.9 39 59.0
CARHR080180 Cardamine hirsuta HOM05D000786 ORTHO05D000779 3.5e-07 58.5 56 48.2
Atru.chr5.1054 Acer truncatum HOM05D000786 ORTHO05D000779 4.6e-07 58.2 109 33.9
Migut.N02109 Erythranthe guttata HOM05D000786 ORTHO05D000779 4.6e-07 58.2 43 55.8
Nn3g21623 Nelumbo nucifera HOM05D000786 ORTHO05D000779 6.0e-07 57.8 83 36.1
Sed0012854 Sechium edule HOM05D000786 ORTHO05D000779 6.0e-07 57.8 39 56.4
Sopen09g030450 Solanum pennellii HOM05D000786 ORTHO05D000779 7.9e-07 57.4 39 56.4
Thhalv10001686m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 1.0e-06 57.0 65 38.5
Glyma.19G229300 Glycine max HOM05D000786 ORTHO05D000779 1.0e-06 57.0 114 31.6
FAN14G2240 Fragaria x ananassa HOM05D013158 ORTHO05D000779 1.3e-06 56.6 134 31.3
Nn4g25661 Nelumbo nucifera HOM05D000786 ORTHO05D000779 1.3e-06 56.6 117 30.8
C05p61500 Brassica napus HOM05D000786 ORTHO05D000779 1.8e-06 56.2 113 32.7
BraA05t22947Z Brassica rapa HOM05D000786 ORTHO05D000779 1.8e-06 56.2 113 32.7
Haze_05005 Corylus avellana HOM05D000786 ORTHO05D000779 1.8e-06 56.2 103 31.1
Manes.05G001600 Manihot esculenta HOM05D000786 ORTHO05D000779 1.8e-06 56.2 105 31.4
PGR083G1617 Punica granatum HOM05D000786 ORTHO05D000779 1.8e-06 56.2 95 36.8
AUR62005266 Chenopodium quinoa HOM05D000786 ORTHO05D000779 2.3e-06 55.8 56 48.2
Solyc09g075650.3 Solanum lycopersicum HOM05D000786 ORTHO05D000779 2.3e-06 55.8 109 34.9
ClCG10G011210 Citrullus lanatus HOM05D000786 ORTHO05D000779 3.0e-06 55.5 75 41.3
TWI18G0458 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 3.0e-06 55.5 39 53.8
TAR362G0003 Trochodendron aralioides HOM05D000786 ORTHO05D000779 3.0e-06 55.5 100 34.0
Ciclev10022952m.g Citrus clementina HOM05D000786 ORTHO05D000779 3.9e-06 55.1 114 36.0
FAN09G3870 Fragaria x ananassa HOM05D013158 ORTHO05D000779 3.9e-06 55.1 63 41.3
Duzib138G1722 Durio zibethinus HOM05D000786 ORTHO05D000779 5.1e-06 54.7 39 53.8
Glyma.03G232300 Glycine max HOM05D000786 ORTHO05D000779 5.1e-06 54.7 115 30.4
Oeu029476.1 Olea europaea HOM05D000786 ORTHO05D000779 5.1e-06 54.7 102 31.4
Peaxi162Scf00001g00286 Petunia axillaris HOM05D000786 ORTHO05D000779 5.1e-06 54.7 95 31.6
BcaC05g29785 Brassica carinata HOM05D000786 ORTHO05D000779 6.7e-06 54.3 113 31.9
CSS0019360 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 6.7e-06 54.3 65 43.1
CSS0023598 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 6.7e-06 54.3 57 43.9
CAN.G668.24 Capsicum annuum HOM05D000786 ORTHO05D000779 6.7e-06 54.3 98 33.7
Duzib133G0956 Durio zibethinus HOM05D000786 ORTHO05D000779 6.7e-06 54.3 57 42.1
Duzib177G0463 Durio zibethinus HOM05D000786 ORTHO05D000779 6.7e-06 54.3 97 34.0
Potri.013G010600 Populus trichocarpa HOM05D000786 ORTHO05D000779 6.7e-06 54.3 54 48.1
MSTRG.21668 Avicennia marina HOM05D000786 ORTHO05D000779 8.7e-06 53.9 100 32.0
Cfa005844 Carpinus fangiana HOM05D000786 ORTHO05D000779 8.7e-06 53.9 64 37.5
COL.COLO4_08863 Corchorus olitorius HOM05D000786 ORTHO05D000779 8.7e-06 53.9 65 43.1
Thhalv10021773m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 8.7e-06 53.9 112 33.0
Potri.006G147700 Populus trichocarpa HOM05D000786 ORTHO05D000779 8.7e-06 53.9 75 38.7
SHI00507 Sapria himalayana HOM05D000786 ORTHO05D000779 8.7e-06 53.9 57 40.4
HPP92_025190 Vanilla planifolia HOM05D000786 ORTHO05D000779 8.7e-06 53.9 79 39.2


User provided reference genes

Program Settings