Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018874 Sechium edule HOM05D005796 ORTHO05D007054 3.7e-106 388.3 203 100.0
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 3.4e-59 232.3 174 71.8
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.2e-56 223.8 176 71.0
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.5e-56 222.2 174 69.5
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 3.6e-53 212.2 174 70.1
Ciclev10021819m.g Citrus clementina HOM05D005796 ORTHO05D007054 3.2e-25 119.4 132 53.8
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 4.2e-25 119.0 156 47.4
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 5.5e-25 118.6 100 69.0
GSVIVG01008066001 Vitis vinifera HOM05D005796 ORTHO05D007054 5.5e-25 118.6 99 67.7
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 9.3e-25 117.9 98 65.3
Prupe.5G185800 Prunus persica HOM05D005796 ORTHO05D007054 1.2e-24 117.5 91 69.2
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 2.1e-24 116.7 153 50.3
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 4.6e-24 115.5 161 47.2
QL10p015507 Quercus lobata HOM05D005796 ORTHO05D007054 7.9e-24 114.8 146 50.7
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 1.0e-23 114.4 101 65.3
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.0e-23 114.4 141 51.1
Cc04_g15610 Coffea canephora HOM05D005796 ORTHO05D007054 1.3e-23 114.0 107 60.7
Manes.14G074300 Manihot esculenta HOM05D005796 ORTHO05D007054 1.3e-23 114.0 85 69.4
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 1.3e-23 114.0 86 70.9
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 1.3e-23 114.0 86 70.9
Thecc.03G078500 Theobroma cacao HOM05D005796 ORTHO05D007054 2.3e-23 113.2 158 49.4
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 3.0e-23 112.8 157 50.3
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 3.0e-23 112.8 101 64.4
FAN08G2559 Fragaria x ananassa HOM05D005796 ORTHO05D007054 3.9e-23 112.5 95 61.1
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 5.1e-23 112.1 94 61.7
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 5.1e-23 112.1 150 50.0
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 6.7e-23 111.7 176 46.6
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 6.7e-23 111.7 100 60.0
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 6.7e-23 111.7 91 65.9
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 8.7e-23 111.3 93 61.3
CiPaw.11G037800 Carya illinoinensis HOM05D005796 ORTHO05D007054 1.1e-22 110.9 151 49.7
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 1.1e-22 110.9 158 46.8
MSTRG.4407 Avicennia marina HOM05D005796 ORTHO05D007054 1.5e-22 110.5 128 50.0
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 1.5e-22 110.5 138 51.4
FvH4_5g15530 Fragaria vesca HOM05D005796 ORTHO05D007054 1.5e-22 110.5 89 64.0
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 1.5e-22 110.5 126 47.6
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 3.3e-22 109.4 98 67.3
Sc12g0006170 Simmondsia chinensis HOM05D005796 ORTHO05D007054 3.3e-22 109.4 84 69.0
Atru.chr9.2321 Acer truncatum HOM05D005796 ORTHO05D007054 4.3e-22 109.0 143 53.8
Eucgr.B00422 Eucalyptus grandis HOM05D005796 ORTHO05D007054 4.3e-22 109.0 83 68.7
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 5.7e-22 108.6 135 54.1
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 5.7e-22 108.6 103 58.3
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 5.7e-22 108.6 104 61.5
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 7.4e-22 108.2 177 45.8
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 7.4e-22 108.2 153 47.7
Cpa.g.sc414.2 Carica papaya HOM05D005796 ORTHO05D007054 9.7e-22 107.8 83 67.5
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 9.7e-22 107.8 123 52.8
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 9.7e-22 107.8 88 64.8
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 1.3e-21 107.5 98 55.1
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 1.6e-21 107.1 76 72.4
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 1.6e-21 107.1 134 47.8
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 2.8e-21 106.3 73 72.6
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 3.7e-21 105.9 110 56.4
DCAR_026077 Daucus carota HOM05D005796 ORTHO05D007054 1.1e-20 104.4 85 63.5
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 1.1e-20 104.4 69 75.4
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.1e-20 104.4 76 72.4
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.1e-20 104.4 88 60.2
Haze_07383 Corylus avellana HOM05D005796 ORTHO05D007054 1.8e-20 103.6 145 47.6
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 3.1e-20 102.8 97 58.8
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 4.1e-20 102.4 174 41.4
vmacro19431 Vaccinium macrocarpon HOM05D005796 ORTHO05D007054 4.1e-20 102.4 99 58.6
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 6.9e-20 101.7 76 69.7
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 6.9e-20 101.7 91 59.3
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 6.9e-20 101.7 67 76.1
Aa31LG4G16620 Aethionema arabicum HOM05D005796 ORTHO05D007054 9.0e-20 101.3 106 51.9
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 9.0e-20 101.3 147 47.6
Lalb_Chr13g0303431 Lupinus albus HOM05D005796 ORTHO05D007054 1.5e-19 100.5 99 61.6
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 2.6e-19 99.8 96 60.4
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 2.6e-19 99.8 85 61.2
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 4.5e-19 99.0 73 65.8
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 4.5e-19 99.0 158 43.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 7.7e-19 98.2 83 61.4
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 1.0e-18 97.8 98 58.2
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 1.0e-18 97.8 98 57.1
Sp5g14000 Schrenkiella parvula HOM05D005796 ORTHO05D007054 1.0e-18 97.8 155 41.3
unitig_0.g783 Utricularia gibba HOM05D005796 ORTHO05D007054 1.0e-18 97.8 69 68.1
BcaNung01383 Brassica carinata HOM05D005796 ORTHO05D007054 1.3e-18 97.4 104 54.8
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 1.7e-18 97.1 150 41.3
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 1.7e-18 97.1 103 51.5
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 1.7e-18 97.1 103 51.5
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 2.2e-18 96.7 69 66.7
Thhalv10010656m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 5.0e-18 95.5 98 54.1
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 6.5e-18 95.1 103 48.5
Carub.0005s1409 Capsella rubella HOM05D005796 ORTHO05D007054 6.5e-18 95.1 103 48.5
Aa31LG11G960 Aethionema arabicum HOM05D005796 ORTHO05D007054 8.5e-18 94.7 107 48.6
AL5G27300 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 8.5e-18 94.7 69 63.8
AT5G62720 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 8.5e-18 94.7 102 51.0
BcaC01g02511 Brassica carinata HOM05D005796 ORTHO05D007054 8.5e-18 94.7 151 39.7
BcaC04g23395 Brassica carinata HOM05D005796 ORTHO05D007054 8.5e-18 94.7 104 52.9
C03p64010 Brassica napus HOM05D000012 ORTHO05D002455 8.5e-18 94.7 151 39.7
C09p08810 Brassica napus HOM05D005796 ORTHO05D007054 8.5e-18 94.7 104 52.9
BolC3t18656H Brassica oleracea HOM05D005796 ORTHO05D007054 8.5e-18 94.7 151 39.7
AL8G39690 Arabidopsis lyrata HOM05D005796 ORTHO05D007054 1.1e-17 94.4 105 54.3
BolC9t53794H Brassica oleracea HOM05D005796 ORTHO05D007054 1.1e-17 94.4 103 52.4
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 1.1e-17 94.4 77 62.3
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 1.4e-17 94.0 60 71.7
A09p07830 Brassica napus HOM05D005796 ORTHO05D007054 3.2e-17 92.8 88 55.7
BraA09t36434Z Brassica rapa HOM05D005796 ORTHO05D007054 3.2e-17 92.8 88 55.7
Carub.0008s2345 Capsella rubella HOM05D005796 ORTHO05D007054 3.2e-17 92.8 105 50.5
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 3.2e-17 92.8 113 49.6
CARHR276510 Cardamine hirsuta HOM05D005796 ORTHO05D007054 4.2e-17 92.4 87 55.2
A06p29510 Brassica napus HOM05D000012 ORTHO05D002455 5.5e-17 92.0 151 39.1
BraA06t25896Z Brassica rapa HOM05D005796 ORTHO05D007054 5.5e-17 92.0 151 39.1
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 7.2e-17 91.7 141 42.6
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 9.4e-17 91.3 173 40.5
Nn4g23032 Nelumbo nucifera HOM05D005796 ORTHO05D007054 1.2e-16 90.9 99 52.5
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 1.6e-16 90.5 182 38.5
CARHR156700 Cardamine hirsuta HOM05D005796 ORTHO05D007054 1.6e-16 90.5 117 43.6
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 2.1e-16 90.1 109 47.7
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 2.1e-16 90.1 183 38.8
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 2.1e-16 90.1 183 38.8
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 4.6e-16 89.0 183 38.8
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 4.6e-16 89.0 180 37.2
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 6.1e-16 88.6 114 46.5
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 6.1e-16 88.6 105 53.3
THA.LOC104821456 Tarenaya hassleriana HOM05D005796 ORTHO05D007054 1.4e-15 87.4 98 48.0
Zm00001eb053360 Zea mays HOM05D005796 ORTHO05D007054 2.3e-15 86.7 98 51.0
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 1.5e-14 84.0 88 52.3
Sp2g25890 Schrenkiella parvula HOM05D005796 ORTHO05D007054 2.5e-14 83.2 104 47.1
Thhalv10004798m.g Eutrema salsugineum HOM05D005796 ORTHO05D007054 5.7e-14 82.0 160 38.1
Os03g0684700 Oryza sativa ssp. japonica HOM05D005796 ORTHO05D007054 7.4e-14 81.6 60 65.0
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 9.7e-14 81.3 51 82.4
Zm00001eb217240 Zea mays HOM05D005796 ORTHO05D007054 8.2e-13 78.2 135 40.7
SMO356G0151 Selaginella moellendorffii HOM05D005796 ORTHO05D007054 5.3e-12 75.5 57 64.9
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 5.0e-10 68.9 80 47.5
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 6.5e-10 68.6 56 60.7
Sabra12G0050500 Salix brachista HOM05D005796 ORTHO05D007054 1.4e-09 67.4 91 46.2
Rhsim08G0160200 Rhododendron simsii HOM05D005796 ORTHO05D007054 9.7e-06 54.7 49 61.2


User provided reference genes

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