Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018828 Sechium edule HOM05D004475 ORTHO05D005235 1.9e-96 355.9 191 100.0
Sed0026196 Sechium edule HOM05D004475 ORTHO05D005235 1.6e-58 229.9 160 80.0
ClCG04G003840 Citrullus lanatus HOM05D004475 ORTHO05D005235 1.6e-55 219.9 155 78.7
MELO3C026314.2 Cucumis melo HOM05D004475 ORTHO05D005235 4.9e-52 208.4 155 74.8
CsaV3_4G027790 Cucumis sativus L. HOM05D004475 ORTHO05D005235 1.7e-36 156.8 114 74.6
TAR369G1128 Trochodendron aralioides HOM05D004475 ORTHO05D005235 1.7e-23 113.6 164 50.0
Cfa016767 Carpinus fangiana HOM05D004475 ORTHO05D005235 2.4e-22 109.8 156 46.8
TWI77G0736 Tripterygium wilfordii HOM05D004475 ORTHO05D005235 3.1e-22 109.4 160 46.9
Dinv39670 Davidia involucrata HOM05D004475 ORTHO05D005235 4.1e-22 109.0 158 49.4
Ciclev10005778m.g Citrus clementina HOM05D004475 ORTHO05D005235 9.1e-22 107.8 158 45.6
CiPaw.10G036200 Carya illinoinensis HOM05D004475 ORTHO05D005235 2.0e-21 106.7 158 47.5
TWI53G0253 Tripterygium wilfordii HOM05D004475 ORTHO05D005235 4.5e-21 105.5 161 46.6
GSVIVG01005040001 Vitis vinifera HOM05D004475 ORTHO05D005235 5.9e-21 105.1 158 46.2
Eucgr.A02304 Eucalyptus grandis HOM05D004475 ORTHO05D005235 1.0e-20 104.4 156 46.8
QL07p004070 Quercus lobata HOM05D004475 ORTHO05D005235 1.0e-20 104.4 160 48.1
TWI74G0419 Tripterygium wilfordii HOM05D004475 ORTHO05D005235 1.0e-20 104.4 161 48.4
Prupe.2G152500 Prunus persica HOM05D004475 ORTHO05D005235 3.8e-20 102.4 162 46.9
Atru.chr1.1194 Acer truncatum HOM05D004475 ORTHO05D005235 1.9e-19 100.1 158 45.6
Nitab4.5_0010656g0010 Nicotiana tabacum HOM05D004475 ORTHO05D005235 1.9e-19 100.1 157 45.2
Glyma.03G133200 Glycine max HOM05D004475 ORTHO05D005235 2.5e-19 99.8 158 48.1
VMungo1383G1580 Vigna mungo HOM05D004475 ORTHO05D005235 2.5e-19 99.8 165 43.6
THA.LOC104824427 Tarenaya hassleriana HOM05D004475 ORTHO05D005235 3.2e-19 99.4 159 44.7
Cpa.g.sc182.27 Carica papaya HOM05D004475 ORTHO05D005235 4.2e-19 99.0 159 44.7
Duzib128G1477 Durio zibethinus HOM05D004475 ORTHO05D005235 4.2e-19 99.0 152 44.1
Nn7g36424 Nelumbo nucifera HOM05D004475 ORTHO05D005235 4.2e-19 99.0 165 43.6
Nitab4.5_0000082g0290 Nicotiana tabacum HOM05D004475 ORTHO05D005235 4.2e-19 99.0 157 45.9
Phvul.001G128700 Phaseolus vulgaris HOM05D004475 ORTHO05D005235 4.2e-19 99.0 157 45.9
Peaxi162Scf00002g00359 Petunia axillaris HOM05D004475 ORTHO05D005235 5.5e-19 98.6 157 43.9
Hund24650 Selenicereus undatus HOM05D004475 ORTHO05D005235 5.5e-19 98.6 156 44.9
Sp5g05320 Schrenkiella parvula HOM05D004475 ORTHO05D005235 7.2e-19 98.2 158 44.3
AT3G57280 Arabidopsis thaliana HOM05D004475 ORTHO05D005235 9.4e-19 97.8 156 44.2
C08p32680 Brassica napus HOM05D004475 ORTHO05D005235 9.4e-19 97.8 159 43.4
Manes.09G010600 Manihot esculenta HOM05D004475 ORTHO05D005235 1.6e-18 97.1 159 44.0
Solyc10g079260.2 Solanum lycopersicum HOM05D004475 ORTHO05D005235 1.6e-18 97.1 158 44.9
AL5G38770 Arabidopsis lyrata HOM05D004475 ORTHO05D005235 2.1e-18 96.7 158 43.7
A07p23330 Brassica napus HOM05D004475 ORTHO05D005235 2.1e-18 96.7 159 44.0
CARHR167480 Cardamine hirsuta HOM05D004475 ORTHO05D005235 3.6e-18 95.9 158 45.6
FAN06G2651 Fragaria x ananassa HOM05D004475 ORTHO05D005235 3.6e-18 95.9 167 40.7
Glyma.19G135000 Glycine max HOM05D004475 ORTHO05D005235 6.1e-18 95.1 159 46.5
TPR.G32720 Trifolium pratense HOM05D004475 ORTHO05D005235 6.1e-18 95.1 157 45.2
Thecc.04G085100 Theobroma cacao HOM05D004475 ORTHO05D005235 8.0e-18 94.7 151 43.7
Actinidia38137 Actinidia chinensis HOM05D004475 ORTHO05D005235 1.0e-17 94.4 158 44.3
BcaC07g40061 Brassica carinata HOM05D004475 ORTHO05D005235 1.0e-17 94.4 158 43.0
BolC8t50880H Brassica oleracea HOM05D004475 ORTHO05D005235 1.0e-17 94.4 159 43.4
CAN.G641.30 Capsicum annuum HOM05D004475 ORTHO05D005235 1.0e-17 94.4 157 43.3
PSO541G2072 Papaver somniferum HOM05D004475 ORTHO05D005235 1.8e-17 93.6 168 44.0
CAN.G1237.9 Capsicum annuum HOM05D004475 ORTHO05D005235 2.3e-17 93.2 156 39.7
Medtr7g090890 Medicago truncatula HOM05D004475 ORTHO05D005235 4.0e-17 92.4 160 44.4
Thhalv10006224m.g Eutrema salsugineum HOM05D004475 ORTHO05D005235 5.2e-17 92.0 158 43.7
A09p50200 Brassica napus HOM05D004475 ORTHO05D005235 6.7e-17 91.7 156 41.7
BraA09t40470Z Brassica rapa HOM05D004475 ORTHO05D005235 6.7e-17 91.7 156 41.7
BolC6t37586H Brassica oleracea HOM05D004475 ORTHO05D005235 8.8e-17 91.3 159 40.9
COL.COLO4_31106 Corchorus olitorius HOM05D004475 ORTHO05D005235 8.8e-17 91.3 163 41.7
FAN06G2315 Fragaria x ananassa HOM05D004475 ORTHO05D005235 8.8e-17 91.3 160 40.0
Peaxi162Scf00130g00932 Petunia axillaris HOM05D004475 ORTHO05D005235 8.8e-17 91.3 159 39.6
Gohir.A02G105902 Gossypium hirsutum HOM05D004475 ORTHO05D005235 1.2e-16 90.9 152 44.7
PGSC0003DMG400008171 Solanum tuberosum HOM05D004475 ORTHO05D005235 1.2e-16 90.9 117 49.6
Duzib093G1491 Durio zibethinus HOM05D004475 ORTHO05D005235 2.0e-16 90.1 155 45.2
RcHm_v2.0_Chr1g0351831 Rosa chinensis HOM05D004475 ORTHO05D005235 2.0e-16 90.1 160 40.0
arahy.Tifrunner.gnm1.ann1.65IVB9 Arachis hypogaea HOM05D004475 ORTHO05D005235 2.6e-16 89.7 167 42.5
arahy.Tifrunner.gnm1.ann1.Y19QZX Arachis hypogaea HOM05D004475 ORTHO05D005235 2.6e-16 89.7 165 43.0
SGA_v2.0_scaffold105G30365 Striga asiatica HOM05D004475 ORTHO05D005235 2.6e-16 89.7 157 43.9
BcaC08g44832 Brassica carinata HOM05D004475 ORTHO05D005235 3.3e-16 89.4 159 40.9
FvH4_7g12800 Fragaria vesca HOM05D004475 ORTHO05D005235 3.3e-16 89.4 160 39.4
Gohir.D03G073000 Gossypium hirsutum HOM05D004475 ORTHO05D005235 3.3e-16 89.4 152 44.1
Gorai.003G086800 Gossypium raimondii HOM05D004475 ORTHO05D005235 3.3e-16 89.4 152 44.1
vmacro21959 Vaccinium macrocarpon HOM05D004475 ORTHO05D005235 3.3e-16 89.4 157 40.8
Dinv18682 Davidia involucrata HOM05D004475 ORTHO05D005235 4.4e-16 89.0 168 42.3
BraA07t29998Z Brassica rapa HOM05D004475 ORTHO05D005235 9.7e-16 87.8 158 41.8
CANSAT80G2630 Cannabis sativa HOM05D004475 ORTHO05D005235 9.7e-16 87.8 154 42.2
FAN10G0874 Fragaria x ananassa HOM05D004475 ORTHO05D005235 9.7e-16 87.8 161 44.1
Lalb_Chr01g0017241 Lupinus albus HOM05D004475 ORTHO05D005235 9.7e-16 87.8 187 37.4
Rhsim03G0029800 Rhododendron simsii HOM05D004475 ORTHO05D005235 9.7e-16 87.8 119 46.2
arahy.Tifrunner.gnm1.ann1.AU6CR8 Arachis hypogaea HOM05D004475 ORTHO05D005235 1.7e-15 87.0 165 42.4
arahy.Tifrunner.gnm1.ann1.QEH0EE Arachis hypogaea HOM05D004475 ORTHO05D005235 2.2e-15 86.7 169 40.2
MSTRG.10806 Avicennia marina HOM05D004475 ORTHO05D005235 2.2e-15 86.7 158 42.4
SGA_v2.0_scaffold69G23128 Striga asiatica HOM05D004475 ORTHO05D005235 2.2e-15 86.7 157 42.7
Aa31LG10G12150 Aethionema arabicum HOM05D004475 ORTHO05D005235 2.8e-15 86.3 173 41.0
AUR62024523 Chenopodium quinoa HOM05D004475 ORTHO05D005235 2.8e-15 86.3 162 42.6
PGR004G0119 Punica granatum HOM05D004475 ORTHO05D005235 3.7e-15 85.9 158 40.5
EL10Ac3g07152 Beta vulgaris HOM05D004475 ORTHO05D005235 4.8e-15 85.5 156 43.6
FAN01G1920 Fragaria x ananassa HOM05D004475 ORTHO05D005235 6.3e-15 85.1 160 38.8
C06p24380 Brassica napus HOM05D004475 ORTHO05D005235 1.1e-14 84.3 160 40.0
Lj1A1123G21 Lonicera japonica HOM05D004475 ORTHO05D005235 1.1e-14 84.3 121 43.0
PGSC0003DMG400012719 Solanum tuberosum HOM05D004475 ORTHO05D005235 1.1e-14 84.3 158 36.7
Lj2A388T27 Lonicera japonica HOM05D004475 ORTHO05D005235 1.4e-14 84.0 160 41.9
MBI05_g34359_MAGBIO Magnolia biondii HOM05D004475 ORTHO05D005235 1.8e-14 83.6 164 36.6
PSO675G0454 Papaver somniferum HOM05D004475 ORTHO05D005235 1.8e-14 83.6 158 39.2
Carub.0005s2413 Capsella rubella HOM05D004475 ORTHO05D005235 2.4e-14 83.2 156 41.7
AUR62026115 Chenopodium quinoa HOM05D004475 ORTHO05D005235 3.1e-14 82.8 156 41.7
SalBow6G6503 Salvia bowleyana HOM05D004475 ORTHO05D005235 3.1e-14 82.8 159 41.5
HanXRQChr01g0008311 Helianthus annuus HOM05D004475 ORTHO05D005235 4.1e-14 82.4 158 38.6
MSTRG.6404 Avicennia marina HOM05D004475 ORTHO05D005235 5.3e-14 82.0 158 42.4
Cc06_g18210 Coffea canephora HOM05D004475 ORTHO05D005235 9.1e-14 81.3 122 45.1
Aqoxy1G03236 Aquilegia oxysepala HOM05D004475 ORTHO05D005235 1.2e-13 80.9 164 38.4
Carub.0001s3807 Capsella rubella HOM05D004475 ORTHO05D005235 1.2e-13 80.9 156 41.0
Sopen04g008540 Solanum pennellii HOM05D004475 ORTHO05D005235 1.6e-13 80.5 158 36.7
BcaC02g09925 Brassica carinata HOM05D004475 ORTHO05D005235 2.7e-13 79.7 156 39.7
CSS0035330 Camellia sinensis var. sinensis HOM05D004475 ORTHO05D005235 3.5e-13 79.3 160 41.2
CSS0043412 Camellia sinensis var. sinensis HOM05D004475 ORTHO05D005235 5.9e-13 78.6 157 42.0
Lj1g0003764 Lotus japonicus HOM05D004475 ORTHO05D005235 5.9e-13 78.6 171 40.4
Potri.001G139800 Populus trichocarpa HOM05D004475 ORTHO05D005235 7.7e-13 78.2 165 38.8
Aqoxy5G02252 Aquilegia oxysepala HOM05D004475 ORTHO05D005235 1.7e-12 77.0 162 41.4
Migut.J01712 Erythranthe guttata HOM05D004475 ORTHO05D005235 3.8e-12 75.9 160 40.6
C04p35100 Brassica napus HOM05D004475 ORTHO05D005235 8.5e-12 74.7 64 64.1
BolC4t25066H Brassica oleracea HOM05D004475 ORTHO05D005235 8.5e-12 74.7 64 64.1
Potri.003G094300 Populus trichocarpa HOM05D004475 ORTHO05D005235 1.1e-11 74.3 167 38.3
HanXRQChr10g0298201 Helianthus annuus HOM05D004475 ORTHO05D005235 1.5e-11 73.9 159 36.5
Solyc04g016440.4 Solanum lycopersicum HOM05D004475 ORTHO05D005235 1.5e-11 73.9 102 45.1
Sabra01G0108900 Salix brachista HOM05D004475 ORTHO05D005235 2.5e-11 73.2 167 37.7
Oeu023134.1 Olea europaea HOM05D004475 ORTHO05D005235 4.2e-11 72.4 67 59.7
MBI07_g06431_MAGBIO Magnolia biondii HOM05D003129 ORTHO05D000022 5.5e-11 72.0 166 36.1
FAN10G1216 Fragaria x ananassa HOM05D004764 ORTHO05D005580 9.4e-11 71.2 139 40.3
Haze_19778 Corylus avellana HOM05D004475 ORTHO05D005235 1.2e-10 70.9 142 41.5
Lsat_1_v5_gn_5_161180 Lactuca sativa HOM05D004475 ORTHO05D005235 1.2e-10 70.9 160 36.9
Actinidia17673 Actinidia chinensis HOM05D004475 ORTHO05D005235 2.1e-10 70.1 94 48.9
Oeu008174.1 Olea europaea HOM05D004475 ORTHO05D005235 3.6e-10 69.3 67 58.2
HPP92_017986 Vanilla planifolia HOM05D004475 ORTHO05D005235 1.8e-09 67.0 119 32.8
ATR0749G001 Amborella trichopoda HOM05D004475 ORTHO05D005235 4.0e-09 65.9 151 37.7
Sc19g0008500 Simmondsia chinensis HOM05D042330 ORTHO05D037608 4.0e-09 65.9 131 39.7
ECA247G2236 Erigeron canadensis HOM05D004475 ORTHO05D005235 5.2e-09 65.5 159 34.6
Migut.K00106 Erythranthe guttata HOM05D004475 ORTHO05D005235 6.8e-09 65.1 157 33.8
Psat0s5127g0040 Pisum sativum HOM05D004475 ORTHO05D005235 8.8e-09 64.7 124 41.9
DCAR_013617 Daucus carota HOM05D004475 ORTHO05D005235 1.2e-08 64.3 163 38.0
Sabra03G0063400 Salix brachista HOM05D004475 ORTHO05D005235 1.5e-08 63.9 131 40.5
SHI12342 Sapria himalayana HOM05D004475 ORTHO05D005235 3.4e-08 62.8 119 39.5
unitig_26.g9059 Utricularia gibba HOM05D004475 ORTHO05D005235 4.4e-08 62.4 116 33.6
SalBow1G0186 Salvia bowleyana HOM05D004475 ORTHO05D005235 5.7e-08 62.0 190 33.2
CDE02G2660 Ceratophyllum demersum HOM05D004475 ORTHO05D005235 1.3e-07 60.8 128 34.4
ECA240G3656 Erigeron canadensis HOM05D004475 ORTHO05D005235 1.3e-07 60.8 114 37.7
CSS0012266 Camellia sinensis var. sinensis HOM05D004475 ORTHO05D005235 1.7e-07 60.5 172 34.9
Ca_22955_v3 Cicer arietinum L. HOM05D004475 ORTHO05D005235 1.7e-07 60.5 121 40.5
Ah.04g151370 Amaranthus hybridus HOM05D004475 ORTHO05D005235 8.3e-07 58.2 103 40.8
Zm00001eb301150 Zea mays HOM05D004475 ORTHO05D005235 1.8e-06 57.0 52 55.8
Zm00001eb317650 Zea mays HOM05D004475 ORTHO05D005235 1.8e-06 57.0 52 55.8
Zm00001eb379540 Zea mays HOM05D004475 ORTHO05D005235 1.8e-06 57.0 52 55.8


User provided reference genes

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