Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018660 Sechium edule HOM05D006855 ORTHO05D008695 1.7e-285 985.3 490 100.0
ClCG05G026110 Citrullus lanatus HOM05D006855 ORTHO05D008695 4.8e-208 728.0 504 76.8
CsaV3_5G030740 Cucumis sativus L. HOM05D006855 ORTHO05D008695 7.1e-188 661.0 501 70.3
MELO3C011916.2 Cucumis melo HOM05D006855 ORTHO05D008695 2.3e-186 656.0 496 70.4
Phvul.001G256400 Phaseolus vulgaris HOM05D006855 ORTHO05D008695 1.0e-141 507.7 416 61.5
Psat5g092640 Pisum sativum HOM05D006855 ORTHO05D008695 1.3e-141 507.3 411 63.5
Glyma.11G244400 Glycine max HOM05D006855 ORTHO05D008695 1.7e-141 506.9 442 60.2
TAR629G1507 Trochodendron aralioides HOM05D006855 ORTHO05D008695 2.9e-141 506.1 449 58.4
TPR.G5676 Trifolium pratense HOM05D006855 ORTHO05D008695 1.1e-140 504.2 411 63.0
Atru.chr11.2187 Acer truncatum HOM05D006855 ORTHO05D008695 2.5e-140 503.1 417 61.9
Duzib248G0606 Durio zibethinus HOM05D006855 ORTHO05D008695 3.3e-140 502.7 450 57.6
Medtr3g086360 Medicago truncatula HOM05D006855 ORTHO05D008695 5.5e-140 501.9 413 61.5
RcHm_v2.0_Chr4g0432431 Rosa chinensis HOM05D006855 ORTHO05D008695 5.5e-140 501.9 419 61.1
MD13G1105700 Malus domestica HOM05D006855 ORTHO05D008695 1.2e-139 500.7 416 60.6
TWI75G0344 Tripterygium wilfordii HOM05D006855 ORTHO05D008695 1.2e-139 500.7 424 60.6
FAN12G0810 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.6e-139 499.2 419 60.6
Dinv14753 Davidia involucrata HOM05D006855 ORTHO05D008695 1.0e-138 497.7 440 58.4
CANSAT01G1415 Cannabis sativa HOM05D006855 ORTHO05D008695 1.8e-138 496.9 421 59.6
GSVIVG01000584001 Vitis vinifera HOM05D006855 ORTHO05D008695 2.3e-138 496.5 445 58.9
Thecc.02G266900 Theobroma cacao HOM05D006855 ORTHO05D008695 3.0e-138 496.1 444 57.9
arahy.Tifrunner.gnm1.ann1.FYV5AX Arachis hypogaea HOM05D006855 ORTHO05D008695 1.2e-137 494.2 416 60.3
FAN17G2133 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.4e-137 492.7 419 60.4
CiPaw.05G176800 Carya illinoinensis HOM05D006855 ORTHO05D008695 4.4e-137 492.3 348 69.3
Potri.010G051200 Populus trichocarpa HOM05D006855 ORTHO05D008695 4.4e-137 492.3 438 59.4
Lalb_Chr11g0075551 Lupinus albus HOM05D006855 ORTHO05D008695 7.5e-137 491.5 415 60.2
Ciclev10031545m.g Citrus clementina HOM05D006855 ORTHO05D008695 1.3e-136 490.7 429 58.0
Prupe.1G240700 Prunus persica HOM05D006855 ORTHO05D008695 6.4e-136 488.4 360 66.9
Nn3g16630 Nelumbo nucifera HOM05D006855 ORTHO05D008695 8.3e-136 488.0 437 57.7
FAN07G2733 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.8e-135 486.9 408 60.3
FAN22G2334 Fragaria x ananassa HOM05D006855 ORTHO05D008695 3.2e-135 486.1 419 59.7
VMungo1383G3215 Vigna mungo HOM05D000933 ORTHO05D000820 5.4e-135 485.3 408 60.3
COL.COLO4_23530 Corchorus olitorius HOM05D006855 ORTHO05D008695 4.6e-134 482.3 407 60.7
CSS0002421 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 7.8e-134 481.5 435 56.6
Lj6g0028045 Lotus japonicus HOM05D006855 ORTHO05D008695 7.8e-134 481.5 411 60.1
Eucgr.H02451 Eucalyptus grandis HOM05D006855 ORTHO05D008695 2.3e-133 479.9 433 56.8
Manes.12G019600 Manihot esculenta HOM05D006855 ORTHO05D008695 4.3e-132 475.7 407 60.4
Actinidia15119 Actinidia chinensis HOM05D006855 ORTHO05D008695 9.5e-132 474.6 433 56.6
Gohir.D12G150600 Gossypium hirsutum HOM05D006855 ORTHO05D008695 2.1e-131 473.4 418 57.4
Solyc01g008900.4 Solanum lycopersicum HOM05D006855 ORTHO05D008695 1.5e-129 467.2 404 58.7
THA.LOC104825678 Tarenaya hassleriana HOM05D006855 ORTHO05D008695 1.5e-129 467.2 427 56.2
MSTRG.548 Avicennia marina HOM05D006855 ORTHO05D008695 2.0e-129 466.8 426 56.6
Sopen01g004390 Solanum pennellii HOM05D006855 ORTHO05D008695 2.0e-129 466.8 403 58.6
Gorai.008G162100 Gossypium raimondii HOM05D006855 ORTHO05D008695 2.6e-129 466.5 418 56.5
PGSC0003DMG400022710 Solanum tuberosum HOM05D006855 ORTHO05D008695 3.4e-129 466.1 404 58.7
Lsat_1_v5_gn_8_153661 Lactuca sativa HOM05D006855 ORTHO05D008695 4.4e-129 465.7 407 58.2
HanXRQChr12g0371791 Helianthus annuus HOM05D006855 ORTHO05D008695 5.8e-129 465.3 407 58.5
CAN.G379.20 Capsicum annuum HOM05D006855 ORTHO05D008695 1.3e-128 464.2 414 58.0
Nitab4.5_0015117g0010 Nicotiana tabacum HOM05D006855 ORTHO05D008695 2.2e-128 463.4 413 58.4
PSO210G7557 Papaver somniferum HOM05D006855 ORTHO05D008695 4.9e-128 462.2 416 57.7
Aqoxy3G01366 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 1.4e-127 460.7 441 55.1
Migut.K00633 Erythranthe guttata HOM05D006855 ORTHO05D008695 1.4e-127 460.7 413 57.6
Aqoxy3G00656 Aquilegia oxysepala HOM05D006855 ORTHO05D008695 3.2e-127 459.5 412 57.8
Peaxi162Scf00050g00819 Petunia axillaris HOM05D006855 ORTHO05D008695 9.2e-127 458.0 404 58.7
Cc11_g16140 Coffea canephora HOM05D006855 ORTHO05D008695 2.0e-126 456.8 426 55.9
Haze_12292 Corylus avellana HOM05D006855 ORTHO05D008695 4.6e-126 455.7 497 51.3
Gohir.A12G146000 Gossypium hirsutum HOM05D006855 ORTHO05D008695 8.6e-125 451.4 436 53.4
Ah.02g130370 Amaranthus hybridus HOM05D006855 ORTHO05D008695 1.9e-124 450.3 421 54.6
PGR083G2447 Punica granatum HOM05D006855 ORTHO05D008695 1.9e-124 450.3 412 56.3
PSO478G2928 Papaver somniferum HOM05D006855 ORTHO05D008695 2.5e-124 449.9 416 56.5
AUR62024216 Chenopodium quinoa HOM05D006855 ORTHO05D008695 4.3e-124 449.1 430 54.4
Carub.0005s0400 Capsella rubella HOM05D006855 ORTHO05D008695 2.8e-123 446.4 432 53.5
Thhalv10004274m.g Eutrema salsugineum HOM05D006855 ORTHO05D008695 4.7e-123 445.7 419 54.2
Aa31LG2G6230 Aethionema arabicum HOM05D006855 ORTHO05D008695 1.5e-121 440.7 415 55.7
CARHR147120 Cardamine hirsuta HOM05D006855 ORTHO05D008695 3.4e-121 439.5 423 54.1
C07p35130 Brassica napus HOM05D006855 ORTHO05D008695 1.7e-120 437.2 420 54.8
Lj3A1062T101 Lonicera japonica HOM05D006855 ORTHO05D008695 2.2e-120 436.8 409 55.7
CDE02G0600 Ceratophyllum demersum HOM05D006855 ORTHO05D008695 4.9e-120 435.6 409 56.2
SGA_v2.0_scaffold100G29585 Striga asiatica HOM05D006855 ORTHO05D008695 4.9e-120 435.6 400 56.0
ATR0796G133 Amborella trichopoda HOM05D006855 ORTHO05D008695 8.3e-120 434.9 412 53.6
Sp2g15320 Schrenkiella parvula HOM05D006855 ORTHO05D008695 1.1e-119 434.5 423 53.9
ECA233G5842 Erigeron canadensis HOM05D000068 ORTHO05D000084 5.4e-119 432.2 387 57.4
SalBow2G0666 Salvia bowleyana HOM05D006855 ORTHO05D008695 5.4e-119 432.2 423 55.3
BolC7t44041H Brassica oleracea HOM05D006855 ORTHO05D008695 7.1e-119 431.8 420 54.3
BcaC06g31090 Brassica carinata HOM05D006855 ORTHO05D008695 9.2e-119 431.4 420 54.3
BcaC06g33927 Brassica carinata HOM05D006855 ORTHO05D008695 1.2e-118 431.0 420 54.3
AL5G14830 Arabidopsis lyrata HOM05D006855 ORTHO05D008695 3.5e-118 429.5 426 52.6
AUR62005523 Chenopodium quinoa HOM05D006855 ORTHO05D008695 3.9e-117 426.0 378 57.9
BraA06t27139Z Brassica rapa HOM05D006855 ORTHO05D008695 8.6e-117 424.9 406 54.9
A06p42230 Brassica napus HOM05D006855 ORTHO05D008695 7.3e-116 421.8 406 54.2
EL10As2g23185 Beta vulgaris HOM05D006855 ORTHO05D008695 2.9e-112 409.8 412 51.7
HPP92_023148 Vanilla planifolia HOM05D006855 ORTHO05D008695 3.0e-109 399.8 401 53.1
unitig_699.g19941 Utricularia gibba HOM05D002671 ORTHO05D001380 5.6e-108 395.6 434 51.4
Nitab4.5_0000718g0180 Nicotiana tabacum HOM05D006855 ORTHO05D008695 3.8e-104 382.9 412 51.5
vmacro16160 Vaccinium macrocarpon HOM05D006855 ORTHO05D008695 6.0e-102 375.6 405 50.1
MBI19_g16323_MAGBIO Magnolia biondii HOM05D006855 ORTHO05D008695 5.6e-100 369.0 343 58.0
Ca_25129_v3 Cicer arietinum L. HOM05D006855 ORTHO05D008695 2.2e-96 357.1 276 63.4
AT3G26115 Arabidopsis thaliana HOM05D006855 ORTHO05D008695 9.3e-95 351.7 352 52.3
Zm00001eb155910 Zea mays HOM05D006855 ORTHO05D008695 1.2e-94 351.3 407 46.4
Mapoly0058s0079 Marchantia polymorpha HOM05D006855 ORTHO05D008695 1.1e-92 344.7 430 44.7
QL03p056156 Quercus lobata HOM05D006855 ORTHO05D008695 3.6e-91 339.7 282 61.7
Pp3c22_21870 Physcomitrium patens HOM05D006855 ORTHO05D008695 8.4e-88 328.6 339 50.4
SMO203G0085 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 8.1e-83 312.0 334 50.0
Sc11g0000830 Simmondsia chinensis HOM05D006855 ORTHO05D008695 1.7e-80 304.3 279 56.6
CSS0027349 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 4.9e-80 302.8 412 42.5
Hund25410 Selenicereus undatus HOM05D006855 ORTHO05D008695 2.0e-73 280.8 321 49.2
SEGI_15055 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 4.2e-71 273.1 280 52.1
FvH4_4g25240 Fragaria vesca HOM05D006855 ORTHO05D008695 2.1e-70 270.8 239 57.3
SMO203G0059 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 6.5e-64 249.2 336 43.8
SMO327G0033 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 2.5e-63 247.3 305 46.6
Cpa.g.sc33.79 Carica papaya HOM05D006855 ORTHO05D008695 5.9e-57 226.1 183 61.2
Cre01.g031850 Chlamydomonas reinhardtii HOM05D006855 ORTHO05D008695 7.7e-57 225.7 436 35.3
Os01g0695600 Oryza sativa ssp. japonica HOM05D006855 ORTHO05D008695 1.9e-55 221.1 408 35.3
Carub.0005s0511 Capsella rubella HOM05D006855 ORTHO05D008695 4.7e-54 216.5 240 48.8
arahy.Tifrunner.gnm1.ann1.74BAAJ Arachis hypogaea HOM05D006855 ORTHO05D008695 1.5e-52 211.5 220 52.7
FAN14G3171 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.2e-49 201.8 150 66.0
FAN18G3688 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.3e-48 198.4 151 64.9
SMO203G0223 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 5.0e-48 196.4 247 45.3
SEGI_08498 Sequoiadendron giganteum HOM05D006855 ORTHO05D008695 8.5e-48 195.7 176 55.1
FAN08G3042 Fragaria x ananassa HOM05D006855 ORTHO05D008695 9.4e-47 192.2 145 64.1
QL03p056162 Quercus lobata HOM05D006855 ORTHO05D008695 4.8e-43 179.9 151 61.6
SMO327G0043 Selaginella moellendorffii HOM05D006855 ORTHO05D008695 1.0e-40 172.2 286 39.5
FAN15G2953 Fragaria x ananassa HOM05D006855 ORTHO05D008695 5.2e-29 133.3 106 60.4
FAN23G2199 Fragaria x ananassa HOM05D006855 ORTHO05D008695 1.5e-28 131.7 106 60.4
CSS0015338 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 3.7e-27 127.1 123 51.2
CSS0040008 Camellia sinensis var. sinensis HOM05D006855 ORTHO05D008695 2.3e-24 117.9 138 43.5
ECA233G3820 Erigeron canadensis HOM05D006855 ORTHO05D008695 5.7e-20 103.2 98 55.1
Sabra10G0018700 Salix brachista HOM05D000933 ORTHO05D000820 1.1e-18 99.0 120 45.0
VMungo1383G3417 Vigna mungo HOM05D006350 ORTHO05D007850 1.8e-13 81.6 68 60.3
THA.LOC104820332 Tarenaya hassleriana HOM05D005071 ORTHO05D006069 2.6e-12 77.8 335 23.0
Rhsim08G0124200 Rhododendron simsii HOM05D005071 ORTHO05D006069 7.5e-12 76.3 363 23.4
Aqoxy3G04132 Aquilegia oxysepala HOM05D005071 ORTHO05D006069 3.5e-09 67.4 340 22.9


User provided reference genes

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