Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 8.1e-73 276.9 136 100.0
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 5.4e-45 184.5 136 66.2
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 3.5e-44 181.8 136 65.4
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 4.0e-40 168.3 127 64.6
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 4.5e-39 164.9 127 62.2
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 7.6e-39 164.1 117 67.5
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 2.9e-38 162.2 126 62.7
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 2.9e-38 162.2 114 65.8
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 4.9e-38 161.4 134 59.7
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.1e-37 160.2 134 58.2
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.1e-37 160.2 130 60.8
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.1e-37 160.2 129 60.5
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 2.4e-37 159.1 129 61.2
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 7.1e-37 157.5 133 58.6
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 7.1e-37 157.5 114 64.0
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.1e-37 157.5 133 58.6
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.1e-37 157.5 133 58.6
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 7.1e-37 157.5 133 58.6
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.2e-36 156.8 113 63.7
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 1.6e-36 156.4 129 58.9
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.6e-36 156.4 113 63.7
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.6e-36 156.4 134 59.0
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.1e-36 156.0 127 61.4
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.1e-36 156.0 123 62.6
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 3.5e-36 155.2 133 57.9
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 4.6e-36 154.8 128 60.2
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 4.6e-36 154.8 123 62.6
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 6.0e-36 154.5 127 60.6
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 6.0e-36 154.5 127 61.4
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 7.9e-36 154.1 113 62.8
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 1.3e-35 153.3 126 56.3
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.3e-35 153.3 124 60.5
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.8e-35 152.9 127 58.3
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 2.3e-35 152.5 129 59.7
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 3.0e-35 152.1 113 61.9
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 5.1e-35 151.4 124 58.9
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 8.7e-35 150.6 127 58.3
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.6e-33 146.4 132 54.5
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 2.1e-33 146.0 134 55.2
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 2.8e-33 145.6 117 61.5
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.8e-33 145.6 128 57.0
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 3.7e-33 145.2 128 57.0
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 1.1e-32 143.7 131 54.2
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 3.1e-32 142.1 126 54.8
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 5.3e-32 141.4 124 57.3
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.2e-31 140.2 119 57.1
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 1.2e-31 140.2 116 57.8
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.2e-31 140.2 121 57.0
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.5e-31 139.8 111 59.5
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.5e-31 139.8 134 50.7
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 4.5e-31 138.3 130 53.1
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 4.5e-31 138.3 120 56.7
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 1.0e-30 137.1 124 57.3
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.7e-30 136.3 130 52.3
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.2e-30 136.0 106 60.4
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 9.3e-29 130.6 122 52.5
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 1.6e-28 129.8 119 52.9
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.1e-28 129.4 122 51.6
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.6e-28 128.3 121 51.2
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.6e-28 128.3 121 51.2
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 7.9e-28 127.5 114 53.5
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.3e-27 125.9 116 51.7
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 8.7e-27 124.0 125 53.6
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.1e-26 123.6 124 51.6
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.9e-26 122.9 127 52.0
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 1.9e-26 122.9 132 50.8
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.8e-24 116.3 131 45.8
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 1.0e-22 110.5 129 45.0
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 8.5e-22 107.5 106 52.8
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 2.5e-21 105.9 112 48.2
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 4.6e-20 101.7 106 49.1
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 6.1e-20 101.3 125 41.6
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.1e-20 101.3 136 42.6
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 1.0e-19 100.5 110 46.4
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.3e-19 99.4 112 42.9
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 8.8e-19 97.4 136 41.2
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 1.5e-18 96.7 112 42.0
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.5e-18 96.7 110 42.7
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.7e-17 93.2 109 41.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.2e-17 92.8 124 38.7
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.8e-17 92.4 117 39.3
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.8e-17 92.4 136 39.0
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.8e-17 92.4 127 39.4
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 1.4e-16 90.1 125 40.8
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.4e-16 90.1 118 38.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.9e-16 87.8 101 45.5
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 9.1e-16 87.4 128 36.7
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.2e-15 87.0 110 40.0
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.4e-15 85.5 127 34.6
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 7.7e-15 84.3 111 39.6
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.2e-14 82.8 136 40.4
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.2e-14 82.8 133 34.6
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 2.9e-14 82.4 111 38.7
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.5e-14 81.3 122 36.1
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.9e-13 79.7 125 38.4
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.9e-13 79.7 107 39.3
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.2e-13 77.8 148 33.1
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 7.2e-13 77.8 109 41.3
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.4e-13 77.4 95 41.1
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.2e-12 77.0 124 33.1
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.6e-12 75.5 67 52.2
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.0e-11 73.9 123 33.3
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 3.9e-11 72.0 114 32.5
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 3.9e-11 72.0 114 32.5
AagrBONN_evm.TU.Sc2ySwM_344.1663 Anthoceros agrestis HOM05D006839 ORTHO05D007872 6.7e-11 71.2 113 37.2
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.3e-10 68.9 124 33.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 3.3e-10 68.9 84 45.2
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.4e-10 68.6 88 44.3
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-08 63.9 103 32.0
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 1.4e-08 63.5 57 50.9
AagrBONN_evm.TU.Sc2ySwM_368.904 Anthoceros agrestis HOM05D032606 ORTHO05D007872 1.8e-08 63.2 109 33.0
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-08 62.8 107 33.6
TWI73G0617 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.4e-08 62.8 132 33.3
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 9.1e-08 60.8 128 30.5
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 5.9e-07 58.2 68 42.6
arahy.Tifrunner.gnm1.ann1.AD1RX8 Arachis hypogaea HOM05D000022 ORTHO05D000071 1.3e-06 57.0 90 32.2
Medtr5g005530 Medicago truncatula HOM05D000022 ORTHO05D000071 2.2e-06 56.2 90 34.4
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.0e-06 55.1 111 31.5
Lj1g0001983 Lotus japonicus HOM05D000022 ORTHO05D000071 8.5e-06 54.3 60 40.0
Manes.12G052300 Manihot esculenta HOM05D000022 ORTHO05D000306 8.5e-06 54.3 99 31.3
SEGI_25560 Sequoiadendron giganteum HOM05D000022 ORTHO05D000071 8.5e-06 54.3 118 34.7
Zm00001eb291380 Zea mays HOM05D000022 ORTHO05D000071 8.5e-06 54.3 101 28.7


User provided reference genes

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