Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 5.4e-53 210.7 103 100.0
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 2.8e-25 118.6 105 61.0
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 1.6e-09 66.2 78 51.3
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 1.6e-09 66.2 98 43.9
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 2.8e-09 65.5 88 42.0
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 4.8e-09 64.7 70 52.9
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 4.8e-09 64.7 79 48.1
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 4.8e-09 64.7 122 37.7
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 6.2e-09 64.3 101 40.6
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 8.1e-09 63.9 85 50.6
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 8.1e-09 63.9 73 45.2
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 1.1e-08 63.5 73 47.9
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 1.4e-08 63.2 79 40.5
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 2.4e-08 62.4 70 48.6
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 2.4e-08 62.4 93 41.9
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 2.4e-08 62.4 56 57.1
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 3.1e-08 62.0 44 70.5
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 4.0e-08 61.6 67 49.3
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 5.3e-08 61.2 87 46.0
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 5.3e-08 61.2 94 43.6
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 9.0e-08 60.5 70 50.0
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 9.0e-08 60.5 101 40.6
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 9.0e-08 60.5 68 48.5
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 9.0e-08 60.5 73 42.5
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 9.0e-08 60.5 66 53.0
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 1.2e-07 60.1 78 43.6
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.2e-07 60.1 44 68.2
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.2e-07 60.1 44 68.2
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 1.5e-07 59.7 71 49.3
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 1.5e-07 59.7 66 53.0
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 2.0e-07 59.3 71 47.9
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 2.0e-07 59.3 71 47.9
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 2.6e-07 58.9 69 49.3
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 3.4e-07 58.5 71 47.9
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 3.4e-07 58.5 71 47.9
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 3.4e-07 58.5 71 47.9
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 5.8e-07 57.8 64 50.0
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 5.8e-07 57.8 117 39.3
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 7.6e-07 57.4 54 55.6
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 7.6e-07 57.4 54 55.6
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 9.9e-07 57.0 71 42.3
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 9.9e-07 57.0 82 45.1
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 9.9e-07 57.0 64 53.1
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 1.3e-06 56.6 85 42.4
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.3e-06 56.6 86 44.2
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 1.7e-06 56.2 70 47.1
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 2.2e-06 55.8 70 47.1
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 4.9e-06 54.7 63 49.2
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 8.4e-06 53.9 78 44.9
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 8.4e-06 53.9 65 47.7


User provided reference genes

Program Settings