Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 3.6e-185 651.4 309 100.0
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 1.7e-163 579.3 308 87.3
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 1.7e-163 579.3 303 89.1
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 6.6e-163 577.4 308 87.0
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.1e-162 576.6 308 86.7
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.5e-162 575.5 308 87.0
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 9.5e-162 573.5 308 86.0
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.1e-161 572.4 308 85.1
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 8.0e-161 570.5 310 84.8
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.0e-160 570.1 307 85.3
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 1.4e-160 569.7 308 85.7
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 5.2e-160 567.8 307 84.4
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 8.9e-160 567.0 302 86.8
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 8.9e-160 567.0 307 84.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 1.2e-159 566.6 308 84.7
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.5e-159 566.2 309 86.4
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.7e-159 564.3 308 85.1
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.9e-158 561.2 307 85.3
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 6.3e-158 560.8 305 86.2
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 8.3e-158 560.5 303 85.5
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.1e-157 560.1 303 84.8
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.4e-157 558.9 307 83.4
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.1e-157 558.1 308 84.1
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 9.2e-157 557.0 303 85.5
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.2e-156 556.6 310 83.5
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.2e-156 556.6 308 83.8
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 1.6e-156 556.2 303 85.5
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 2.7e-156 555.4 308 83.8
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 4.5e-156 554.7 308 84.1
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 2.3e-155 552.4 306 83.0
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 2.3e-155 552.4 303 84.8
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 3.9e-155 551.6 304 82.9
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 3.9e-155 551.6 304 84.9
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 5.0e-155 551.2 313 83.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 3.3e-154 548.5 303 83.8
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 4.3e-154 548.1 310 82.9
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 5.6e-154 547.7 305 81.6
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 5.6e-154 547.7 305 82.3
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 7.3e-154 547.4 308 84.4
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.2e-153 546.6 307 82.7
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 3.6e-153 545.0 304 81.6
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 3.6e-153 545.0 301 84.1
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 4.7e-153 544.7 305 82.0
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 5.2e-152 541.2 308 82.1
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 8.9e-152 540.4 305 81.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 9.8e-151 537.0 308 81.2
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 1.9e-149 532.7 310 80.0
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 3.2e-149 531.9 304 79.3
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 4.1e-149 531.6 310 79.7
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 4.1e-149 531.6 310 79.7
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 4.1e-149 531.6 310 79.7
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.4e-149 531.2 307 81.1
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 7.0e-149 530.8 303 82.5
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 2.0e-148 529.3 304 78.9
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 2.7e-148 528.9 305 79.7
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 3.5e-148 528.5 310 79.4
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.6e-147 524.2 308 81.5
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 7.3e-146 520.8 301 82.1
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 9.5e-146 520.4 308 80.2
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 6.2e-145 517.7 314 77.7
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.1e-144 516.9 308 78.9
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.4e-144 516.5 309 79.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.5e-143 513.1 296 81.8
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 3.7e-142 508.4 309 79.0
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.4e-141 505.8 307 78.2
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 4.1e-141 505.0 309 80.3
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 2.7e-140 502.3 305 76.1
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.3e-139 499.2 307 77.5
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 2.3e-139 499.2 406 63.8
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 1.5e-138 496.5 355 68.7
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 7.3e-138 494.2 277 82.7
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 9.9e-135 483.8 267 83.9
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 3.0e-131 472.2 263 84.0
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 3.9e-131 471.9 293 75.8
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 2.6e-127 459.1 303 72.6
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.5e-124 448.7 261 79.7
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 3.5e-124 448.7 309 71.5
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 2.3e-123 446.0 328 66.2
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.9e-117 426.4 254 78.0
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 3.5e-116 422.2 302 62.6
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.8e-107 393.3 343 59.8
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.1e-92 343.2 307 58.3
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-91 340.5 267 64.4
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.9e-91 339.0 184 83.7
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.6e-87 326.2 186 82.3
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 1.4e-83 313.9 167 86.8
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 2.3e-83 313.2 177 80.8
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 3.0e-83 312.8 165 86.1
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.9e-83 312.4 165 84.8
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 4.3e-82 308.9 165 85.5
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 2.8e-81 306.2 166 82.5
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 4.8e-81 305.4 163 84.0
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 6.3e-81 305.1 165 84.8
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 8.2e-81 304.7 165 84.8
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.8e-80 303.5 165 83.0
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 5.3e-80 302.0 165 81.2
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 6.9e-80 301.6 164 83.5
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 2.0e-79 300.1 164 82.9
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 2.6e-79 299.7 248 54.4
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 1.0e-78 297.7 166 80.7
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.2e-78 296.6 164 80.5
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 9.1e-72 274.6 182 70.9
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 2.7e-68 263.1 141 85.8
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.4e-64 250.0 123 95.9
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 1.2e-63 247.7 123 95.1
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 2.3e-59 233.4 123 90.2
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 7.5e-58 228.4 123 86.2
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.7e-57 227.3 123 87.0
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 8.3e-57 224.9 123 84.6
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.6e-55 220.7 122 85.2
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 2.7e-55 219.9 123 83.7
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 1.0e-54 218.0 122 82.8
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 2.9e-54 216.5 123 82.1
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 6.5e-54 215.3 123 81.3
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 2.1e-52 210.3 123 79.7
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 3.6e-52 209.5 123 77.2
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 3.0e-51 206.5 124 76.6
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 7.5e-50 201.8 101 88.1
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 9.8e-50 201.4 117 79.5
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.4e-48 197.6 143 69.2
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 7.0e-48 195.3 124 76.6
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.2e-47 194.5 107 81.3
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.7e-33 147.5 89 74.2
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 1.4e-32 144.4 252 36.9
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 4.6e-31 139.4 72 87.5
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 7.3e-29 132.1 79 77.2
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-27 127.1 68 85.3
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 3.0e-22 110.2 64 78.1
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 1.2e-20 104.8 71 73.2
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 1.5e-18 97.8 53 79.2
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 5.6e-13 79.3 46 80.4
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 1.1e-11 75.1 47 74.5
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 5.8e-10 69.3 40 80.0
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 2.2e-09 67.4 34 88.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 5.4e-08 62.8 56 55.4


User provided reference genes

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