Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 1.7e-52 211.5 191 100.0
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 3.6e-39 167.2 192 69.3
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 2.1e-23 114.8 186 57.5
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 1.0e-22 112.5 193 35.2
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 6.8e-22 109.8 191 58.6
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 1.3e-20 105.5 56 85.7
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 7.0e-19 99.8 188 54.3
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 9.2e-19 99.4 193 40.9
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 5.0e-17 93.6 191 37.7
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 6.6e-17 93.2 186 38.7
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 6.6e-17 93.2 196 43.4
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 6.6e-17 93.2 196 43.9
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 1.1e-16 92.4 196 44.4
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.5e-16 92.0 183 71.6
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 1.5e-16 92.0 183 71.6
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 7.3e-16 89.7 191 37.2
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 3.6e-15 87.4 194 36.6
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 6.1e-15 86.7 197 30.5
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 1.0e-14 85.9 194 33.5
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 2.3e-14 84.7 186 69.4
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 5.2e-14 83.6 186 35.5
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 6.8e-14 83.2 196 45.4
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 6.8e-14 83.2 194 36.1
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 2.0e-13 81.6 195 35.9
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 3.4e-13 80.9 196 44.9
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 3.2e-11 74.3 51 56.9
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 3.2e-11 74.3 56 55.4
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 5.4e-11 73.6 56 55.4
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 4.6e-10 70.5 58 55.2
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 1.0e-09 69.3 59 55.9
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 2.3e-09 68.2 58 55.2
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 1.5e-08 65.5 58 48.3
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 9.5e-08 62.8 58 50.0
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 9.5e-08 62.8 58 50.0
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 3.6e-07 60.8 187 46.5


User provided reference genes

Program Settings