Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018210 Sechium edule HOM05D008304 ORTHO05D004056 4.2e-34 147.5 78 100.0
ClCG01G001410 Citrullus lanatus HOM05D008304 ORTHO05D004056 3.0e-24 114.8 83 78.3
CsaV3_5G001550 Cucumis sativus L. HOM05D008304 ORTHO05D004056 4.7e-17 90.9 79 68.4
QL02p027330 Quercus lobata HOM05D008304 ORTHO05D004056 2.6e-15 85.1 80 63.8
Manes.01G055200 Manihot esculenta HOM05D008304 ORTHO05D004056 7.5e-15 83.6 79 63.3
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 9.8e-15 83.2 83 66.3
Actinidia22217 Actinidia chinensis HOM05D008304 ORTHO05D004056 1.7e-14 82.4 85 65.9
Cfa011898 Carpinus fangiana HOM05D008304 ORTHO05D004056 1.7e-14 82.4 83 66.3
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 1.1e-13 79.7 78 67.9
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 1.4e-13 79.3 85 64.7
Nitab4.5_0002520g0050 Nicotiana tabacum HOM05D008304 ORTHO05D004056 2.4e-13 78.6 88 58.0
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 5.4e-13 77.4 83 61.4
CSS0003921 Camellia sinensis var. sinensis HOM05D008304 ORTHO05D004056 7.0e-13 77.0 89 59.6
Dinv12896 Davidia involucrata HOM05D008304 ORTHO05D004056 7.0e-13 77.0 83 61.4
Dinv18759 Davidia involucrata HOM05D008304 ORTHO05D004056 1.2e-12 76.3 97 56.7
CANSAT21G0162 Cannabis sativa HOM05D008304 ORTHO05D004056 2.7e-12 75.1 78 61.5
Oeu042857.1 Olea europaea HOM05D008304 ORTHO05D004056 4.6e-12 74.3 79 58.2
Potri.001G449633 Populus trichocarpa HOM05D008304 ORTHO05D004056 7.8e-12 73.6 78 59.0
Sabra16G0303400 Salix brachista HOM05D008304 ORTHO05D004056 1.7e-11 72.4 81 61.7
Sed0024309 Sechium edule HOM05D008304 ORTHO05D004056 2.9e-11 71.6 81 60.5
MBI04_g22063_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 3.9e-11 71.2 78 61.5
Duzib205G1739 Durio zibethinus HOM05D008304 ORTHO05D004056 5.0e-11 70.9 80 58.8
Cc08_g16980 Coffea canephora HOM05D008304 ORTHO05D004056 1.1e-10 69.7 87 52.9
Cpa.g.sc37.98 Carica papaya HOM05D008304 ORTHO05D004056 1.5e-10 69.3 80 58.8
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 1.5e-10 69.3 79 55.7
PGR042G2542 Punica granatum HOM05D008304 ORTHO05D004056 1.9e-10 68.9 84 53.6
vmacro11488 Vaccinium macrocarpon HOM05D008304 ORTHO05D004056 2.5e-10 68.6 88 56.8
CDE04G3503 Ceratophyllum demersum HOM05D008304 ORTHO05D004056 3.3e-10 68.2 78 56.4
COL.COLO4_10829 Corchorus olitorius HOM05D008304 ORTHO05D004056 3.3e-10 68.2 83 55.4
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 4.3e-10 67.8 79 55.7
MD06G1122200 Malus domestica HOM05D008304 ORTHO05D004056 4.3e-10 67.8 78 53.8
Oeu015753.1 Olea europaea HOM05D008304 ORTHO05D004056 2.8e-09 65.1 80 56.2
Peaxi162Scf00074g00131 Petunia axillaris HOM05D008304 ORTHO05D004056 2.8e-09 65.1 82 54.9
Migut.E00724 Erythranthe guttata HOM05D008304 ORTHO05D004056 4.7e-09 64.3 81 50.6
Eucgr.D01660 Eucalyptus grandis HOM05D008304 ORTHO05D004056 8.0e-09 63.5 75 50.7
FvH4_5g10570 Fragaria vesca HOM05D008304 ORTHO05D004056 8.0e-09 63.5 78 55.1
FAN04G0709 Fragaria x ananassa HOM05D008304 ORTHO05D012179 8.0e-09 63.5 78 55.1
FAN13G2184 Fragaria x ananassa HOM05D008304 ORTHO05D012179 8.0e-09 63.5 78 55.1
FAN18G4101 Fragaria x ananassa HOM05D008304 ORTHO05D012179 8.0e-09 63.5 78 55.1
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 8.0e-09 63.5 80 52.5
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 8.0e-09 63.5 80 52.5
Sabra11G0136700 Salix brachista HOM05D008304 ORTHO05D004056 8.0e-09 63.5 78 50.0
Sabra11G0148600 Salix brachista HOM05D008304 ORTHO05D004056 8.0e-09 63.5 78 50.0
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 1.4e-08 62.8 80 57.5
Ciclev10023139m.g Citrus clementina HOM05D008304 ORTHO05D004056 1.8e-08 62.4 81 51.9
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 4.0e-08 61.2 80 51.2
Gohir.A09G187800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 6.8e-08 60.5 80 50.0
Gohir.D09G182600 Gossypium hirsutum HOM05D008304 ORTHO05D004056 6.8e-08 60.5 80 50.0
Gorai.006G204900 Gossypium raimondii HOM05D008304 ORTHO05D004056 6.8e-08 60.5 80 50.0
MD14G1138600 Malus domestica HOM05D008304 ORTHO05D004056 6.8e-08 60.5 78 50.0
MBI02_g46466_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 8.9e-08 60.1 78 52.6
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 1.2e-07 59.7 82 51.2
Nn1g00437 Nelumbo nucifera HOM05D008304 ORTHO05D004056 1.2e-07 59.7 78 51.3
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 1.5e-07 59.3 73 53.4
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 2.0e-07 58.9 79 50.6
Atru.chr9.1863 Acer truncatum HOM05D008304 ORTHO05D004056 2.6e-07 58.5 79 54.4
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 5.8e-07 57.4 83 49.4
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 5.8e-07 57.4 83 51.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 9.8e-07 56.6 80 56.2
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 9.8e-07 56.6 83 51.8
Potri.011G151900 Populus trichocarpa HOM05D008304 ORTHO05D004056 9.8e-07 56.6 78 48.7
MBI02_g42223_MAGBIO Magnolia biondii HOM05D056943 ORTHO05D004056 1.3e-06 56.2 78 52.6
CAN.G567.106 Capsicum annuum HOM05D008304 ORTHO05D004056 1.7e-06 55.8 75 53.3
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.9e-06 55.1 76 47.4
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 4.9e-06 54.3 71 50.7
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 6.4e-06 53.9 78 52.6
Phvul.004G108400 Phaseolus vulgaris HOM05D025024 ORTHO05D004056 8.3e-06 53.5 38 65.8


User provided reference genes

Program Settings