Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018174 Sechium edule HOM05D007410 ORTHO05D009500 1.1e-135 488.4 829 100.0
ClCG05G007520 Citrullus lanatus HOM05D007410 ORTHO05D009500 4.5e-65 253.8 211 69.2
CsaV3_3G016400 Cucumis sativus L. HOM05D007410 ORTHO05D009500 7.6e-65 253.1 229 65.1
MELO3C006839.2 Cucumis melo HOM05D007410 ORTHO05D009500 2.9e-64 251.1 223 65.5
MD12G1016300 Malus domestica HOM05D007410 ORTHO05D009500 7.2e-31 140.2 200 45.0
RcHm_v2.0_Chr3g0471971 Rosa chinensis HOM05D007410 ORTHO05D009500 1.4e-29 136.0 168 49.4
Prupe.7G119000 Prunus persica HOM05D007410 ORTHO05D009500 3.9e-29 134.4 212 43.9
MD14G1014400 Malus domestica HOM05D007410 ORTHO05D009500 5.1e-29 134.0 205 43.9
Cfa016527 Carpinus fangiana HOM05D007410 ORTHO05D009500 1.7e-27 129.0 224 39.7
Dinv34010 Davidia involucrata HOM05D007410 ORTHO05D009500 2.8e-27 128.3 195 42.6
FvH4_6g17750 Fragaria vesca HOM05D007410 ORTHO05D009500 1.4e-26 125.9 183 48.1
FAN02G1401 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.8e-26 125.6 153 51.0
FAN14G2442 Fragaria x ananassa HOM05D007410 ORTHO05D009500 7.0e-26 123.6 179 48.0
Haze_19526 Corylus avellana HOM05D007410 ORTHO05D009500 2.6e-25 121.7 211 40.3
TWI60G0552 Tripterygium wilfordii HOM05D007410 ORTHO05D009500 4.5e-25 120.9 148 47.3
FAN09G1720 Fragaria x ananassa HOM05D007410 ORTHO05D009500 5.9e-25 120.6 152 50.7
QL02p025248 Quercus lobata HOM05D007410 ORTHO05D009500 2.2e-24 118.6 185 44.3
Dinv39608 Davidia involucrata HOM05D007410 ORTHO05D009500 1.9e-23 115.5 172 62.2
Eucgr.A01557 Eucalyptus grandis HOM05D007410 ORTHO05D009500 4.2e-23 114.4 152 42.8
FAN05G1927 Fragaria x ananassa HOM05D007410 ORTHO05D009500 2.1e-22 112.1 155 45.8
BolC9t59308H Brassica oleracea HOM05D007410 ORTHO05D009500 3.0e-21 108.2 153 42.5
Hma1.2p1_0084F.1_g043130 Hydrangea macrophylla HOM05D007410 ORTHO05D009500 8.8e-21 106.7 123 52.0
TAR365G0607 Trochodendron aralioides HOM05D007410 ORTHO05D009500 2.6e-20 105.1 176 39.2
CSS0026121 Camellia sinensis var. sinensis HOM05D007410 ORTHO05D009500 4.4e-20 104.4 172 63.4
C09p64770 Brassica napus HOM05D007410 ORTHO05D009500 1.7e-19 102.4 142 42.3
Aa31LG3G15130 Aethionema arabicum HOM05D007410 ORTHO05D009500 2.2e-19 102.1 160 38.1
AT5G12100 Arabidopsis thaliana HOM05D007410 ORTHO05D009500 3.7e-19 101.3 145 41.4
Sp6g31520 Schrenkiella parvula HOM05D007410 ORTHO05D009500 3.7e-19 101.3 168 38.1
A10p25700 Brassica napus HOM05D007410 ORTHO05D009500 1.4e-18 99.4 151 39.7
BraA10t44635Z Brassica rapa HOM05D007410 ORTHO05D009500 1.4e-18 99.4 151 40.4
Carub.0006s1061 Capsella rubella HOM05D007410 ORTHO05D009500 3.1e-18 98.2 165 38.8
Aqoxy1G00955 Aquilegia oxysepala HOM05D007410 ORTHO05D009500 4.1e-18 97.8 195 34.9
Potri.010G249800 Populus trichocarpa HOM05D007410 ORTHO05D009500 7.0e-18 97.1 167 64.1
BcaNung06328 Brassica carinata HOM05D007410 ORTHO05D009500 2.0e-17 95.5 169 38.5
Rhsim03G0082200 Rhododendron simsii HOM05D007410 ORTHO05D009500 2.0e-17 95.5 166 41.6
Atru.BG.129.p Acer truncatum HOM05D007410 ORTHO05D009500 4.5e-17 94.4 129 48.1
Phvul.001G185900 Phaseolus vulgaris HOM05D007410 ORTHO05D009500 5.9e-17 94.0 164 38.4
DCAR_020784 Daucus carota HOM05D007410 ORTHO05D009500 1.0e-16 93.2 149 36.2
FAN09G0790 Fragaria x ananassa HOM05D007410 ORTHO05D009500 1.7e-16 92.4 174 62.6
Gohir.A01G210000 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.7e-16 92.4 169 63.3
Nitab4.5_0005621g0120 Nicotiana tabacum HOM05D007410 ORTHO05D009500 2.2e-16 92.0 165 62.4
Glyma.19G190733 Glycine max HOM05D007410 ORTHO05D009500 2.9e-16 91.7 162 66.0
CARHR201020 Cardamine hirsuta HOM05D007410 ORTHO05D009500 6.5e-16 90.5 169 36.1
Duzib093G0520 Durio zibethinus HOM05D007410 ORTHO05D009500 1.5e-15 89.4 172 61.6
Gohir.D01G198900 Gossypium hirsutum HOM05D007410 ORTHO05D009500 1.5e-15 89.4 169 62.1
Gorai.002G243300 Gossypium raimondii HOM05D007410 ORTHO05D009500 1.5e-15 89.4 169 62.1
Lalb_Chr01g0018371 Lupinus albus HOM05D007410 ORTHO05D009500 1.9e-15 89.0 162 65.4
VMungo1383G0444 Vigna mungo HOM05D007410 ORTHO05D009500 2.5e-15 88.6 147 40.1
DCAR_013956 Daucus carota HOM05D007410 ORTHO05D009500 3.2e-15 88.2 150 33.3
Sabra10G0194300 Salix brachista HOM05D001909 ORTHO05D007079 4.2e-15 87.8 172 62.2
Nitab4.5_0001290g0100 Nicotiana tabacum HOM05D007410 ORTHO05D009500 1.2e-14 86.3 166 36.7
Manes.09G058000 Manihot esculenta HOM05D007410 ORTHO05D009500 2.7e-14 85.1 172 61.0
Atru.chr12.1030 Acer truncatum HOM05D007410 ORTHO05D009500 3.6e-14 84.7 93 57.0
CiPaw.09G007900 Carya illinoinensis HOM05D007410 ORTHO05D009500 3.6e-14 84.7 145 41.4
Nn8g39918 Nelumbo nucifera HOM05D007410 ORTHO05D009500 3.6e-14 84.7 134 40.3
Nitab4.5_0026813g0010 Nicotiana tabacum HOM05D007410 ORTHO05D009500 3.6e-14 84.7 166 38.0
Sc18g0006010 Simmondsia chinensis HOM05D007410 ORTHO05D009500 3.6e-14 84.7 122 41.8
AUR62013683 Chenopodium quinoa HOM05D007410 ORTHO05D009500 1.0e-13 83.2 171 62.0
PGR004G1775 Punica granatum HOM05D007410 ORTHO05D009500 1.8e-13 82.4 119 42.9
CANSAT80G0494 Cannabis sativa HOM05D007410 ORTHO05D009500 2.3e-13 82.0 159 63.5
Lj1g0017625 Lotus japonicus HOM05D007410 ORTHO05D009500 3.0e-13 81.6 158 65.2
Glyma.03G190300 Glycine max HOM05D007410 ORTHO05D009500 4.0e-13 81.3 147 36.1
Medtr7g103600 Medicago truncatula HOM05D007410 ORTHO05D009500 5.2e-13 80.9 158 63.3
CAN.G575.91 Capsicum annuum HOM05D007410 ORTHO05D009500 8.8e-13 80.1 174 55.2
Psat2g007640 Pisum sativum HOM05D007410 ORTHO05D009500 1.2e-12 79.7 158 63.3
Ca_08961_v3 Cicer arietinum L. HOM05D007410 ORTHO05D009500 2.0e-12 79.0 158 63.3
AUR62004183 Chenopodium quinoa HOM05D007410 ORTHO05D009500 2.6e-12 78.6 154 33.8
Oeu023854.1 Olea europaea HOM05D007410 ORTHO05D009500 4.4e-12 77.8 166 32.5
HanXRQChr17g0534281 Helianthus annuus HOM05D007410 ORTHO05D009500 9.7e-12 76.6 158 33.5
Sopen12g034470 Solanum pennellii HOM05D007410 ORTHO05D009500 1.3e-11 76.3 178 34.3
PGSC0003DMG400004719 Solanum tuberosum HOM05D007410 ORTHO05D009500 2.8e-11 75.1 169 34.3
HanXRQChr17g0535541 Helianthus annuus HOM05D007410 ORTHO05D009500 4.8e-11 74.3 167 30.5
SHI27720 Sapria himalayana HOM05D007410 ORTHO05D009500 4.8e-11 74.3 137 38.7
SGA_v2.0_scaffold75G24801 Striga asiatica HOM05D007410 ORTHO05D009500 4.8e-11 74.3 166 32.5
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.1e-10 73.2 136 36.8
Oeu058028.1 Olea europaea HOM05D007410 ORTHO05D009500 1.1e-10 73.2 139 36.0
COL.COLO4_29826 Corchorus olitorius HOM05D007410 ORTHO05D009500 1.4e-10 72.8 76 42.1
Solyc12g099840.1 Solanum lycopersicum HOM05D007410 ORTHO05D009500 1.4e-10 72.8 178 33.1
TPR.G28359 Trifolium pratense HOM05D007410 ORTHO05D009500 1.8e-10 72.4 156 64.1
Peaxi162Scf00802g00013 Petunia axillaris HOM05D007410 ORTHO05D009500 2.4e-10 72.0 160 33.1
Cpa.g.sc117.70 Carica papaya HOM05D007410 ORTHO05D009500 9.1e-10 70.1 173 59.5
Atru.chr12.1036 Acer truncatum HOM05D007410 ORTHO05D009500 1.6e-09 69.3 97 40.2
EL10Ac1g00861 Beta vulgaris HOM05D007410 ORTHO05D009500 2.0e-09 68.9 179 30.2
Cc06_g05130 Coffea canephora HOM05D007410 ORTHO05D009500 2.7e-09 68.6 171 34.5
Lj9E304T4 Lonicera japonica HOM05D007410 ORTHO05D009500 5.9e-09 67.4 114 37.7
Migut.A01169 Erythranthe guttata HOM05D007410 ORTHO05D009500 2.5e-07 62.0 175 56.6
Ah.05g174660 Amaranthus hybridus HOM05D007410 ORTHO05D009500 3.2e-07 61.6 161 59.6
Thhalv10015810m.g Eutrema salsugineum HOM05D007410 ORTHO05D009500 5.5e-07 60.8 88 37.5
CDE01G0670 Ceratophyllum demersum HOM05D003192 ORTHO05D003596 1.2e-06 59.7 211 28.0
SGA_v2.0_scaffold40G15416 Striga asiatica HOM05D007410 ORTHO05D009500 1.2e-06 59.7 137 30.7
Ciclev10033972m.g Citrus clementina HOM05D007410 ORTHO05D009500 2.7e-06 58.5 103 38.8
HanXRQChr02g0058171 Helianthus annuus HOM05D007410 ORTHO05D009500 4.7e-06 57.8 60 40.0


User provided reference genes

Program Settings