Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018150 Sechium edule HOM05D008067 ORTHO05D010226 1.2e-36 156.0 81 100.0
CsaV3_1G030530 Cucumis sativus L. HOM05D008067 ORTHO05D010226 7.3e-21 103.6 84 67.9
Sed0018286 Sechium edule HOM05D008067 ORTHO05D010226 7.8e-15 83.6 84 57.1
Cfa003263 Carpinus fangiana HOM05D008067 ORTHO05D010226 4.4e-10 67.8 79 51.9
TAR624G0725 Trochodendron aralioides HOM05D008067 ORTHO05D010226 4.4e-10 67.8 73 57.5
Haze_25708 Corylus avellana HOM05D008067 ORTHO05D010226 3.7e-09 64.7 79 51.9
Nn8g39208 Nelumbo nucifera HOM05D008067 ORTHO05D010226 4.9e-09 64.3 78 48.7
Thecc.09G111500 Theobroma cacao HOM05D008067 ORTHO05D010226 1.4e-08 62.8 51 66.7
CSS0009961 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 3.2e-08 61.6 65 58.5
CSS0037112 Camellia sinensis var. sinensis HOM05D008067 ORTHO05D010226 3.2e-08 61.6 65 58.5
QL02p085507 Quercus lobata HOM05D008067 ORTHO05D010226 3.2e-08 61.6 76 48.7
COL.COLO4_34910 Corchorus olitorius HOM05D008067 ORTHO05D010226 5.4e-08 60.8 52 63.5
Nn2g11761 Nelumbo nucifera HOM05D008067 ORTHO05D010226 7.1e-08 60.5 78 46.2
ClCG11G002490 Citrullus lanatus HOM05D008067 ORTHO05D010226 9.2e-08 60.1 79 48.1
Potri.018G079200 Populus trichocarpa HOM05D008067 ORTHO05D010226 9.2e-08 60.1 88 50.0
Ciclev10010044m.g Citrus clementina HOM05D008067 ORTHO05D010226 6.0e-07 57.4 93 44.1
Gohir.A06G061900 Gossypium hirsutum HOM05D008067 ORTHO05D010226 6.0e-07 57.4 53 56.6
HPP92_010803 Vanilla planifolia HOM05D008067 ORTHO05D010226 6.0e-07 57.4 75 45.3
CiPaw.04G164800 Carya illinoinensis HOM05D008067 ORTHO05D010226 7.8e-07 57.0 79 50.6
CsaV3_2G002290 Cucumis sativus L. HOM05D008067 ORTHO05D010226 7.8e-07 57.0 86 46.5
Manes.03G019700 Manihot esculenta HOM05D008067 ORTHO05D010226 7.8e-07 57.0 80 48.8
MELO3C004555.2 Cucumis melo HOM05D008067 ORTHO05D010226 1.0e-06 56.6 79 45.6
Prupe.7G230000 Prunus persica HOM05D008067 ORTHO05D010226 1.3e-06 56.2 74 47.3
Sed0011788 Sechium edule HOM05D008067 ORTHO05D010226 1.3e-06 56.2 79 44.3
Sed0012648 Sechium edule HOM05D008067 ORTHO05D010226 1.3e-06 56.2 79 44.3
FvH4_1g04950 Fragaria vesca HOM05D008067 ORTHO05D010226 2.3e-06 55.5 75 52.0
FAN23G0784 Fragaria x ananassa HOM05D008067 ORTHO05D010226 3.0e-06 55.1 79 51.9
Gohir.D06G060201 Gossypium hirsutum HOM05D008067 ORTHO05D010226 3.9e-06 54.7 87 46.0
MD02G1048100 Malus domestica HOM05D008067 ORTHO05D010226 3.9e-06 54.7 74 45.9
CARHR087850 Cardamine hirsuta HOM05D006736 ORTHO05D008459 5.1e-06 54.3 46 56.5
CiPaw.03G232800 Carya illinoinensis HOM05D008067 ORTHO05D010226 5.1e-06 54.3 88 43.2
RcHm_v2.0_Chr2g0090561 Rosa chinensis HOM05D008067 ORTHO05D010226 5.1e-06 54.3 44 61.4
Atru.chr7.1341 Acer truncatum HOM05D008067 ORTHO05D010226 6.6e-06 53.9 56 51.8
Carub.0002s1440 Capsella rubella HOM05D007247 ORTHO05D009208 6.6e-06 53.9 74 45.9


User provided reference genes

Program Settings