Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 3.0e-64 248.4 132 100.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 6.2e-54 214.2 132 85.6
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.6e-52 208.8 132 84.8
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 5.8e-52 207.6 132 84.8
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.1e-37 160.2 129 67.4
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 2.5e-34 149.1 130 63.1
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 3.2e-34 148.7 122 64.8
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 7.2e-34 147.5 139 60.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 7.9e-33 144.1 123 65.9
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.0e-32 143.7 124 62.9
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.0e-32 143.7 130 62.3
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.3e-32 143.3 132 60.6
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 2.3e-32 142.5 124 66.1
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.0e-32 142.1 116 67.2
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 3.9e-32 141.7 123 62.6
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 3.9e-32 141.7 113 65.5
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 8.7e-32 140.6 123 62.6
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.1e-31 140.2 132 58.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 1.5e-31 139.8 124 62.1
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 1.9e-31 139.4 132 62.9
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 2.5e-31 139.0 131 60.3
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 2.5e-31 139.0 131 60.3
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 4.3e-31 138.3 122 63.9
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 7.4e-31 137.5 134 57.5
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 7.4e-31 137.5 134 57.5
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 7.4e-31 137.5 132 59.8
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 4.8e-30 134.8 123 60.2
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 4.8e-30 134.8 123 60.2
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 4.8e-30 134.8 120 60.0
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 6.3e-30 134.4 119 62.2
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.2e-30 134.0 132 60.6
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.8e-29 132.9 114 63.2
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 3.1e-29 132.1 136 57.4
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 3.1e-29 132.1 137 57.7
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 5.3e-29 131.3 103 68.0
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 6.9e-29 131.0 119 59.7
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 6.9e-29 131.0 119 59.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 6.9e-29 131.0 119 59.7
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 6.9e-29 131.0 119 59.7
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 6.9e-29 131.0 119 59.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.1e-29 130.6 131 57.3
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.2e-28 130.2 125 58.4
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.0e-28 129.4 128 57.0
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.0e-28 129.4 133 59.4
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.6e-28 129.0 125 59.2
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 2.6e-28 129.0 127 58.3
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.4e-28 128.6 125 59.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 4.5e-28 128.3 124 58.1
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 4.5e-28 128.3 129 55.0
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.3e-27 126.7 131 55.0
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.2e-27 125.9 125 60.0
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.9e-27 125.6 113 61.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 3.8e-27 125.2 117 59.8
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 6.5e-27 124.4 131 56.5
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 8.5e-27 124.0 123 58.5
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 8.5e-27 124.0 108 63.0
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.1e-26 123.6 130 54.6
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 1.9e-26 122.9 119 58.8
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 2.5e-26 122.5 123 56.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.2e-26 122.1 98 64.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 4.2e-26 121.7 127 58.3
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 4.2e-26 121.7 129 52.7
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 5.5e-26 121.3 128 54.7
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 7.2e-26 120.9 126 57.1
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.2e-26 120.9 129 53.5
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 9.4e-26 120.6 128 54.7
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.2e-25 120.2 127 58.3
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.2e-25 120.2 120 58.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 1.2e-25 120.2 127 57.5
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 1.2e-25 120.2 130 50.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.2e-25 120.2 128 53.9
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.6e-25 119.8 129 55.8
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 128 53.9
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.7e-25 119.0 137 51.1
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.6e-25 118.6 130 52.3
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 4.7e-25 118.2 128 53.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 6.1e-25 117.9 128 58.6
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 6.1e-25 117.9 128 52.3
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 7.9e-25 117.5 128 51.6
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 7.9e-25 117.5 128 52.3
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.0e-24 117.1 109 56.9
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.4e-24 116.7 120 57.5
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 121 56.2
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 3.0e-24 115.5 130 52.3
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 5.1e-24 114.8 131 51.1
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 8.8e-24 114.0 129 52.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.1e-23 113.6 108 56.5
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.0e-23 112.8 109 54.1
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 3.3e-23 112.1 107 56.1
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 5.7e-23 111.3 129 45.7
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 5.7e-23 111.3 137 48.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 7.4e-23 110.9 131 50.4
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 7.4e-23 110.9 129 47.3
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 9.7e-23 110.5 130 47.7
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 4.8e-22 108.2 131 48.1
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.8e-21 106.3 130 49.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 3.1e-21 105.5 128 48.4
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 3.1e-21 105.5 124 50.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.1e-21 105.1 121 46.3
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 5.3e-21 104.8 88 62.5
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.9e-21 104.4 112 48.2
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.2e-20 103.6 127 46.5
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.2e-20 103.6 132 44.7
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.2e-20 103.6 127 48.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.5e-20 103.2 124 47.6
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 2.0e-20 102.8 129 44.2
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 4.5e-20 101.7 133 46.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 7.7e-20 100.9 124 49.2
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.0e-19 100.5 101 55.4
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 6.5e-19 97.8 109 49.5
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 3.2e-18 95.5 113 52.2
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 4.2e-18 95.1 127 42.5
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.2e-17 93.6 121 47.9
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.6e-17 92.0 70 65.7
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 8.8e-16 87.4 108 47.2
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 9.7e-15 84.0 64 65.6
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.3e-14 81.3 64 67.2
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 6.3e-14 81.3 85 48.2
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 2.4e-13 79.3 78 44.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 5.3e-13 78.2 91 56.0
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 9.1e-13 77.4 104 40.4
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 1.3e-11 73.6 84 41.7
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 1.5e-10 70.1 89 53.9
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 5.5e-10 68.2 108 38.9
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 2.2e-06 56.2 122 27.9


User provided reference genes

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