Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018138 Sechium edule HOM05D001859 ORTHO05D001836 8.2e-97 357.1 181 100.0
Sed0009653 Sechium edule HOM05D001859 ORTHO05D001836 3.6e-28 129.0 220 38.6
MELO3C022326.2 Cucumis melo HOM05D001859 ORTHO05D001836 4.9e-25 118.6 227 36.1
CsaV3_6G008090 Cucumis sativus L. HOM05D001859 ORTHO05D001836 6.4e-25 118.2 264 37.1
Lj6P830T23 Lonicera japonica HOM05D001859 ORTHO05D001836 4.4e-18 95.5 233 33.5
C03p73590 Brassica napus HOM05D001859 ORTHO05D001836 2.9e-17 92.8 216 33.8
Cfa009388 Carpinus fangiana HOM05D001859 ORTHO05D001836 1.1e-16 90.9 265 30.6
TWI36G1521 Tripterygium wilfordii HOM05D001859 ORTHO05D001836 1.4e-16 90.5 204 32.4
Migut.K01004 Erythranthe guttata HOM05D001859 ORTHO05D001836 2.4e-16 89.7 226 32.3
SalBow2G0772 Salvia bowleyana HOM05D001859 ORTHO05D001836 2.4e-16 89.7 201 35.3
BcaC05g26535 Brassica carinata HOM05D001859 ORTHO05D001836 1.2e-15 87.4 227 32.6
BolC5t31310H Brassica oleracea HOM05D001859 ORTHO05D001836 1.2e-15 87.4 227 32.6
Thhalv10009976m.g Eutrema salsugineum HOM05D001859 ORTHO05D001836 1.2e-15 87.4 240 33.8
BcaC01g01628 Brassica carinata HOM05D001859 ORTHO05D001836 2.1e-15 86.7 217 31.8
BolC3t19652H Brassica oleracea HOM05D001859 ORTHO05D001836 2.1e-15 86.7 217 31.8
ClCG07G015400 Citrullus lanatus HOM05D001859 ORTHO05D001836 2.1e-15 86.7 248 31.5
BcaC05g26728 Brassica carinata HOM05D001859 ORTHO05D001836 2.7e-15 86.3 228 32.9
ClCG06G002040 Citrullus lanatus HOM05D001859 ORTHO05D001836 2.7e-15 86.3 236 30.5
DCAR_024660 Daucus carota HOM05D001859 ORTHO05D001836 2.7e-15 86.3 240 30.8
C05p25910 Brassica napus HOM05D001859 ORTHO05D001836 3.5e-15 85.9 228 31.6
RcHm_v2.0_Chr4g0429791 Rosa chinensis HOM05D001859 ORTHO05D001836 3.5e-15 85.9 235 30.6
Haze_12448 Corylus avellana HOM05D001859 ORTHO05D001836 7.8e-15 84.7 233 30.0
CsaV3_4G002990 Cucumis sativus L. HOM05D001859 ORTHO05D001836 1.3e-14 84.0 251 31.5
CiPaw.06G105100 Carya illinoinensis HOM05D001859 ORTHO05D001836 1.7e-14 83.6 282 28.0
A09p38700 Brassica napus HOM05D001859 ORTHO05D001836 2.3e-14 83.2 230 32.6
BraA09t39378Z Brassica rapa HOM05D001859 ORTHO05D001836 2.3e-14 83.2 230 32.6
Nn3g16399 Nelumbo nucifera HOM05D001859 ORTHO05D001836 2.3e-14 83.2 226 31.0
A08p26460 Brassica napus HOM05D001859 ORTHO05D001836 3.0e-14 82.8 224 31.2
BraA08t34598Z Brassica rapa HOM05D001859 ORTHO05D001836 3.0e-14 82.8 224 31.2
MBI07_g21929_MAGBIO Magnolia biondii HOM05D001859 ORTHO05D001836 3.0e-14 82.8 222 28.8
Sed0020687 Sechium edule HOM05D001859 ORTHO05D001836 3.0e-14 82.8 233 31.3
GSVIVG01008571001 Vitis vinifera HOM05D001859 ORTHO05D001836 3.0e-14 82.8 194 34.0
MD13G1122500 Malus domestica HOM05D001859 ORTHO05D001836 3.9e-14 82.4 249 29.7
Sc04g0010300 Simmondsia chinensis HOM05D001859 ORTHO05D001836 3.9e-14 82.4 220 30.0
Nitab4.5_0000251g0040 Nicotiana tabacum HOM05D001859 ORTHO05D001836 5.1e-14 82.0 258 30.2
BolC3t13182H Brassica oleracea HOM05D001859 ORTHO05D001836 8.6e-14 81.3 200 31.0
MELO3C017745.2 Cucumis melo HOM05D001859 ORTHO05D001836 8.6e-14 81.3 253 30.8
DCAR_026447 Daucus carota HOM05D001859 ORTHO05D001836 1.1e-13 80.9 227 30.0
Nn4g22258 Nelumbo nucifera HOM05D001859 ORTHO05D001836 1.1e-13 80.9 243 30.5
Oeu011355.1 Olea europaea HOM05D001859 ORTHO05D001836 1.1e-13 80.9 229 30.6
Prupe.1G222700 Prunus persica HOM05D001859 ORTHO05D001836 1.1e-13 80.9 246 29.3
Sp1g23490 Schrenkiella parvula HOM05D001859 ORTHO05D001836 1.1e-13 80.9 249 29.7
C03p06750 Brassica napus HOM05D001859 ORTHO05D001836 1.5e-13 80.5 200 30.5
Gohir.A07G050000 Gossypium hirsutum HOM05D001859 ORTHO05D001836 1.5e-13 80.5 221 32.1
Aa31LG3G14580 Aethionema arabicum HOM05D001859 ORTHO05D001836 1.9e-13 80.1 208 29.8
BolC9t59238H Brassica oleracea HOM05D001859 ORTHO05D001836 1.9e-13 80.1 226 30.5
PGR119G1262 Punica granatum HOM05D001859 ORTHO05D001836 1.9e-13 80.1 231 35.1
BcaB01g05378 Brassica carinata HOM05D001859 ORTHO05D001836 2.5e-13 79.7 234 33.8
MSTRG.8022 Avicennia marina HOM05D001859 ORTHO05D001836 3.3e-13 79.3 225 31.1
A03p05800 Brassica napus HOM05D001859 ORTHO05D001836 3.3e-13 79.3 238 30.7
C09p64000 Brassica napus HOM05D001859 ORTHO05D001836 3.3e-13 79.3 226 30.1
BraA03t09919Z Brassica rapa HOM05D001859 ORTHO05D001836 3.3e-13 79.3 238 30.7
CARHR026820 Cardamine hirsuta HOM05D001859 ORTHO05D001836 3.3e-13 79.3 201 30.3
Gorai.005G163900 Gossypium raimondii HOM05D001859 ORTHO05D001836 4.3e-13 79.0 232 32.3
ECA233G2352 Erigeron canadensis HOM05D001859 ORTHO05D001836 5.6e-13 78.6 226 31.0
Actinidia09626 Actinidia chinensis HOM05D001859 ORTHO05D001836 7.3e-13 78.2 218 29.8
BraA10t44573Z Brassica rapa HOM05D001859 ORTHO05D001836 7.3e-13 78.2 250 32.4
CARHR200380 Cardamine hirsuta HOM05D001859 ORTHO05D001836 9.6e-13 77.8 251 31.1
Gohir.D02G146400 Gossypium hirsutum HOM05D001859 ORTHO05D001836 9.6e-13 77.8 230 31.7
Oeu026514.1 Olea europaea HOM05D001859 ORTHO05D001836 9.6e-13 77.8 224 31.2
CiPaw.05G107000 Carya illinoinensis HOM05D001859 ORTHO05D001836 1.6e-12 77.0 282 30.1
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 1.6e-12 77.0 231 31.2
Gohir.A03G124000 Gossypium hirsutum HOM05D001859 ORTHO05D001836 1.6e-12 77.0 235 29.8
MD16G1123000 Malus domestica HOM05D001859 ORTHO05D001836 1.6e-12 77.0 278 30.9
Gohir.D07G054300 Gossypium hirsutum HOM05D001859 ORTHO05D001836 2.1e-12 76.6 221 31.2
Thecc.03G132300 Theobroma cacao HOM05D001859 ORTHO05D001836 2.1e-12 76.6 230 30.0
Manes.12G008400 Manihot esculenta HOM05D001859 ORTHO05D001836 2.8e-12 76.3 248 29.0
Thecc.02G201600 Theobroma cacao HOM05D001859 ORTHO05D001836 2.8e-12 76.3 250 28.0
HanXRQChr12g0361361 Helianthus annuus HOM05D001859 ORTHO05D001836 4.7e-12 75.5 214 30.8
THA.LOC104810685 Tarenaya hassleriana HOM05D001859 ORTHO05D001836 6.2e-12 75.1 277 27.8
THA.LOC104816117 Tarenaya hassleriana HOM05D001859 ORTHO05D001836 6.2e-12 75.1 277 27.8
Duzib068G1079 Durio zibethinus HOM05D001859 ORTHO05D001836 8.1e-12 74.7 226 28.3
Duzib205G0733 Durio zibethinus HOM05D001859 ORTHO05D001836 8.1e-12 74.7 224 27.7
A10p25110 Brassica napus HOM05D001859 ORTHO05D001836 1.1e-11 74.3 214 31.8
Gorai.001G057500 Gossypium raimondii HOM05D001859 ORTHO05D001836 1.1e-11 74.3 221 29.4
Dinv17588 Davidia involucrata HOM05D001859 ORTHO05D001836 1.4e-11 73.9 129 45.0
AT5G13090 Arabidopsis thaliana HOM05D001859 ORTHO05D001836 3.1e-11 72.8 265 30.9
FAN07G2239 Fragaria x ananassa HOM05D001859 ORTHO05D001836 6.8e-11 71.6 262 29.0
Duzib251G0275 Durio zibethinus HOM05D001859 ORTHO05D001836 8.9e-11 71.2 280 29.3
Duzib268G1086 Durio zibethinus HOM05D001859 ORTHO05D001836 8.9e-11 71.2 245 26.5
Sp6g30890 Schrenkiella parvula HOM05D001859 ORTHO05D001836 8.9e-11 71.2 266 27.8
AL6G23690 Arabidopsis lyrata HOM05D001859 ORTHO05D001836 1.5e-10 70.5 272 30.1
Hma1.2p1_0065F.1_g035080 Hydrangea macrophylla HOM05D001859 ORTHO05D001836 1.5e-10 70.5 269 27.9
Cc11_g17210 Coffea canephora HOM05D001859 ORTHO05D001836 2.0e-10 70.1 268 29.1
COL.COLO4_06543 Corchorus olitorius HOM05D001859 ORTHO05D001836 2.0e-10 70.1 231 27.3
FAN17G0353 Fragaria x ananassa HOM05D001859 ORTHO05D001836 2.0e-10 70.1 279 27.6
MSTRG.483 Avicennia marina HOM05D001859 ORTHO05D001836 2.6e-10 69.7 225 26.7
Carub.0006s1126 Capsella rubella HOM05D001859 ORTHO05D001836 2.6e-10 69.7 272 31.2
SHI17986 Sapria himalayana HOM05D001859 ORTHO05D001836 2.6e-10 69.7 109 42.2
Actinidia08053 Actinidia chinensis HOM05D001859 ORTHO05D001836 4.4e-10 68.9 99 42.4
FvH4_4g23440 Fragaria vesca HOM05D001859 ORTHO05D001836 4.4e-10 68.9 234 29.1
Gorai.009G331800 Gossypium raimondii HOM05D001859 ORTHO05D001836 4.4e-10 68.9 254 28.0
COL.COLO4_05012 Corchorus olitorius HOM05D001859 ORTHO05D001836 5.8e-10 68.6 280 28.2
Gohir.D05G310900 Gossypium hirsutum HOM05D001859 ORTHO05D001836 5.8e-10 68.6 252 27.4
Ciclev10032426m.g Citrus clementina HOM05D001859 ORTHO05D001836 7.6e-10 68.2 244 27.9
FAN12G0785 Fragaria x ananassa HOM05D001859 ORTHO05D001836 7.6e-10 68.2 263 31.9
Gohir.A05G310000 Gossypium hirsutum HOM05D001859 ORTHO05D001836 7.6e-10 68.2 258 27.9
QL03p051693 Quercus lobata HOM05D001859 ORTHO05D001836 7.6e-10 68.2 121 39.7
Dinv11691 Davidia involucrata HOM05D001859 ORTHO05D001836 9.9e-10 67.8 99 41.4
BcaC04g19153 Brassica carinata HOM05D001859 ORTHO05D001836 1.7e-09 67.0 255 32.5
CSS0045694 Camellia sinensis var. sinensis HOM05D001859 ORTHO05D001836 3.8e-09 65.9 99 42.4
CANSAT01G1962 Cannabis sativa HOM05D001859 ORTHO05D001836 3.8e-09 65.9 289 26.3
Manes.13G008900 Manihot esculenta HOM05D001859 ORTHO05D001836 3.8e-09 65.9 257 27.6
Thhalv10015811m.g Eutrema salsugineum HOM05D001859 ORTHO05D001836 4.9e-09 65.5 234 27.4
THA.LOC104825487 Tarenaya hassleriana HOM05D001859 ORTHO05D001836 4.9e-09 65.5 288 25.3
Ah.03g135960 Amaranthus hybridus HOM05D001859 ORTHO05D001836 6.4e-09 65.1 266 26.3
BcaB03g12067 Brassica carinata HOM05D001859 ORTHO05D001836 6.4e-09 65.1 146 31.5
TAR629G1206 Trochodendron aralioides HOM05D001859 ORTHO05D001836 6.4e-09 65.1 172 30.2
Manes.06G121300 Manihot esculenta HOM05D001859 ORTHO05D001836 1.4e-08 63.9 234 28.2
Rhsim12G0023900 Rhododendron simsii HOM05D001859 ORTHO05D001836 1.4e-08 63.9 251 26.7
Sabra03G0123500 Salix brachista HOM05D001859 ORTHO05D001836 1.4e-08 63.9 253 26.9
TAR624G0820 Trochodendron aralioides HOM05D001859 ORTHO05D001836 1.4e-08 63.9 129 38.8
PGR102G0728 Punica granatum HOM05D001859 ORTHO05D001836 1.9e-08 63.5 137 43.1
PSO478G2859 Papaver somniferum HOM05D001859 ORTHO05D001836 3.2e-08 62.8 128 36.7
Potri.001G059400 Populus trichocarpa HOM05D001859 ORTHO05D001836 3.2e-08 62.8 279 26.9
PSO017G5479 Papaver somniferum HOM05D001859 ORTHO05D001836 4.2e-08 62.4 128 33.6
CANSAT56G1712 Cannabis sativa HOM05D001859 ORTHO05D001836 5.4e-08 62.0 136 36.8
Atru.chr11.2361 Acer truncatum HOM05D001859 ORTHO05D001836 7.1e-08 61.6 114 36.8
Lj4g0021228 Lotus japonicus HOM05D001859 ORTHO05D001836 7.1e-08 61.6 131 36.6
TAR622G1418 Trochodendron aralioides HOM05D001859 ORTHO05D001836 7.1e-08 61.6 190 29.5
CSS0035216 Camellia sinensis var. sinensis HOM05D001859 ORTHO05D001836 9.3e-08 61.2 131 36.6
PSO017G7172 Papaver somniferum HOM05D001859 ORTHO05D001836 9.3e-08 61.2 97 40.2
PSO478G2236 Papaver somniferum HOM05D001859 ORTHO05D001836 9.3e-08 61.2 97 40.2
HPP92_008061 Vanilla planifolia HOM05D001859 ORTHO05D001836 9.3e-08 61.2 124 34.7
QL08p061499 Quercus lobata HOM05D001859 ORTHO05D001836 1.2e-07 60.8 122 36.9
Carub.0002s0255 Capsella rubella HOM05D001859 ORTHO05D001836 1.6e-07 60.5 133 32.3
Potri.003G168500 Populus trichocarpa HOM05D001859 ORTHO05D001836 1.6e-07 60.5 252 27.8
Sed0022678 Sechium edule HOM05D001859 ORTHO05D001836 2.1e-07 60.1 107 38.3
MSTRG.7175 Avicennia marina HOM05D001859 ORTHO05D001836 2.7e-07 59.7 95 40.0
Sc05g0009560 Simmondsia chinensis HOM05D001859 ORTHO05D001836 2.7e-07 59.7 135 34.8
EL10Ac6g13538 Beta vulgaris HOM05D001859 ORTHO05D001836 3.5e-07 59.3 132 34.8
CDE02G1881 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 3.5e-07 59.3 127 35.4
AT1G24270 Arabidopsis thaliana HOM05D001859 ORTHO05D001836 4.6e-07 58.9 133 34.6
Sed0021259 Sechium edule HOM05D001859 ORTHO05D001836 4.6e-07 58.9 108 37.0
Actinidia39797 Actinidia chinensis HOM05D001859 ORTHO05D001836 6.0e-07 58.5 231 25.1
Aqoxy5G03292 Aquilegia oxysepala HOM05D001859 ORTHO05D001836 6.0e-07 58.5 133 35.3
THA.LOC104823538 Tarenaya hassleriana HOM05D001859 ORTHO05D001836 6.0e-07 58.5 96 39.6
Aa31LG2G120 Aethionema arabicum HOM05D001859 ORTHO05D001836 7.8e-07 58.2 95 40.0
CDE04G2569 Ceratophyllum demersum HOM05D005528 ORTHO05D007066 7.8e-07 58.2 197 28.4
ECA236G2537 Erigeron canadensis HOM05D004734 ORTHO05D006019 7.8e-07 58.2 127 33.9
Rhsim13G0148000 Rhododendron simsii HOM05D001859 ORTHO05D001836 7.8e-07 58.2 129 35.7
TAR627G0807 Trochodendron aralioides HOM05D001859 ORTHO05D001836 7.8e-07 58.2 129 36.4
ATR0561G128 Amborella trichopoda HOM05D001859 ORTHO05D001836 1.0e-06 57.8 253 26.5
MELO3C021703.2 Cucumis melo HOM05D001859 ORTHO05D001836 1.0e-06 57.8 111 38.7
Eucgr.D01385 Eucalyptus grandis HOM05D001859 ORTHO05D001836 1.0e-06 57.8 134 35.8
Glyma.07G264800 Glycine max HOM05D001859 ORTHO05D001836 1.0e-06 57.8 133 38.3
Glyma.17G009200 Glycine max HOM05D001859 ORTHO05D001836 1.0e-06 57.8 129 36.4
Sc17g0007670 Simmondsia chinensis HOM05D001859 ORTHO05D001836 1.0e-06 57.8 132 37.1
Medtr2g025410 Medicago truncatula HOM05D001859 ORTHO05D001836 1.3e-06 57.4 127 37.0
Atru.chr1.2488 Acer truncatum HOM05D001859 ORTHO05D001836 1.7e-06 57.0 139 35.3
CiPaw.10G076600 Carya illinoinensis HOM05D001859 ORTHO05D001836 1.7e-06 57.0 130 36.2
SalBow8G3831 Salvia bowleyana HOM05D001859 ORTHO05D001836 1.7e-06 57.0 106 34.9
HPP92_006273 Vanilla planifolia HOM05D001859 ORTHO05D001836 1.7e-06 57.0 232 28.0
Cfa000121 Carpinus fangiana HOM05D001859 ORTHO05D001836 2.3e-06 56.6 109 40.4
Thhalv10024108m.g Eutrema salsugineum HOM05D001859 ORTHO05D001836 2.3e-06 56.6 111 38.7
MBI11_g05334_MAGBIO Magnolia biondii HOM05D001859 ORTHO05D001836 2.3e-06 56.6 28 75.0
Cpa.g.sc152.64 Carica papaya HOM05D001859 ORTHO05D001836 3.0e-06 56.2 129 35.7
ClCG01G009950 Citrullus lanatus HOM05D001859 ORTHO05D001836 3.0e-06 56.2 116 36.2
Nn1g03741 Nelumbo nucifera HOM05D001859 ORTHO05D001836 3.0e-06 56.2 132 34.8
Prupe.4G012500 Prunus persica HOM05D001859 ORTHO05D001836 3.0e-06 56.2 139 35.3
Thecc.06G231400 Theobroma cacao HOM05D001859 ORTHO05D001836 3.0e-06 56.2 133 35.3
AT1G62422 Arabidopsis thaliana HOM05D001859 ORTHO05D001836 3.9e-06 55.8 133 32.3
Haze_06900 Corylus avellana HOM05D001859 ORTHO05D001836 3.9e-06 55.8 130 36.2
Psat4g003520 Pisum sativum HOM05D001859 ORTHO05D001836 3.9e-06 55.8 108 38.9
TWI63G1105 Tripterygium wilfordii HOM05D001859 ORTHO05D001836 3.9e-06 55.8 141 35.5
Prupe.6G184300 Prunus persica HOM05D001859 ORTHO05D001836 5.1e-06 55.5 100 38.0
PGR042G3865 Punica granatum HOM05D001859 ORTHO05D001836 5.1e-06 55.5 126 33.3
FAN09G0464 Fragaria x ananassa HOM05D001859 ORTHO05D001836 6.6e-06 55.1 131 32.1
TWI36G0632 Tripterygium wilfordii HOM05D001859 ORTHO05D001836 6.6e-06 55.1 111 34.2
VMungo0540G2178 Vigna mungo HOM05D001859 ORTHO05D001836 6.6e-06 55.1 106 36.8
Aa31LG7G9950 Aethionema arabicum HOM05D001859 ORTHO05D001836 8.7e-06 54.7 274 26.6
Aqoxy1G04153 Aquilegia oxysepala HOM05D001859 ORTHO05D001836 8.7e-06 54.7 134 33.6
BcaC07g41753 Brassica carinata HOM05D001859 ORTHO05D001836 8.7e-06 54.7 111 34.2
A09p64140 Brassica napus HOM05D001859 ORTHO05D001836 8.7e-06 54.7 111 34.2
C08p47760 Brassica napus HOM05D001859 ORTHO05D001836 8.7e-06 54.7 111 34.2
BraA09t41760Z Brassica rapa HOM05D001859 ORTHO05D001836 8.7e-06 54.7 111 34.2
Ca_00711_v3 Cicer arietinum L. HOM05D001859 ORTHO05D001836 8.7e-06 54.7 127 36.2
FvH4_6g41890 Fragaria vesca HOM05D001859 ORTHO05D001836 8.7e-06 54.7 131 32.8
Lj6g0027371 Lotus japonicus HOM05D001859 ORTHO05D001836 8.7e-06 54.7 127 35.4
TWI38G1020 Tripterygium wilfordii HOM05D001859 ORTHO05D001836 8.7e-06 54.7 114 40.4


User provided reference genes

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