Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 0.0e+00 1351.7 756 100.0
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 9.1e-283 976.9 820 74.6
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.0e-277 959.1 806 73.7
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 4.2e-264 914.8 810 71.7
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 1.5e-213 746.9 667 71.7
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 6.4e-135 485.7 705 49.8
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 7.3e-131 472.2 813 45.4
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 6.8e-129 465.7 734 48.4
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 2.7e-117 427.2 793 42.9
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 3.0e-116 423.7 825 41.7
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 4.3e-115 419.9 659 45.7
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 9.5e-115 418.7 799 42.2
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 1.2e-112 411.8 807 41.3
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 1.7e-111 407.9 816 40.8
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 2.9e-111 407.1 817 41.0
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 5.4e-110 402.9 608 47.4
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 1.0e-108 398.7 854 40.3
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.3e-108 398.3 798 40.9
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 6.6e-108 396.0 781 41.6
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 1.5e-107 394.8 737 42.5
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.9e-107 394.4 795 41.0
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 7.3e-107 392.5 802 41.3
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.2e-106 391.7 788 41.1
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 1.4e-105 388.3 796 41.5
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 4.0e-105 386.7 767 40.9
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 6.8e-105 386.0 698 43.6
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 6.4e-103 379.4 665 43.5
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 2.1e-101 374.4 776 39.9
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 4.6e-101 373.2 792 39.6
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 8.7e-100 369.0 782 39.1
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 9.6e-99 365.5 789 39.2
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.6e-98 364.8 801 39.8
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 2.9e-95 354.0 781 39.6
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 8.4e-95 352.4 814 38.1
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 2.4e-94 350.9 702 40.9
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 3.2e-94 350.5 698 40.4
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 5.4e-94 349.7 674 40.1
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 7.9e-93 345.9 838 38.1
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.0e-92 345.5 837 36.8
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.3e-92 345.1 788 40.1
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 2.3e-92 344.4 803 38.5
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 5.1e-92 343.2 806 39.7
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 8.7e-92 342.4 816 39.3
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 1.5e-91 341.7 793 39.8
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 4.3e-91 340.1 638 42.5
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 5.6e-91 339.7 816 38.7
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 9.6e-91 339.0 793 39.6
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 1.3e-90 338.6 808 39.6
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.6e-90 338.2 838 36.6
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 1.6e-90 338.2 792 39.3
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 2.8e-90 337.4 776 38.3
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 1.8e-89 334.7 805 38.1
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 9.0e-89 332.4 790 38.0
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 3.4e-88 330.5 808 36.3
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-87 328.6 800 38.8
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 7.1e-86 322.8 788 37.4
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.2e-85 322.0 737 39.2
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 1.1e-83 315.5 765 37.5
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.5e-83 315.1 625 40.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 1.3e-82 312.0 573 40.7
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 1.6e-82 311.6 778 36.9
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 1.1e-81 308.9 766 37.2
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.4e-81 308.5 796 35.1
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 6.9e-81 306.2 617 39.4
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 6.5e-79 299.7 790 35.9
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 1.1e-78 298.9 835 35.4
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 1.9e-78 298.1 629 40.2
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.2e-77 295.4 793 37.6
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.1e-77 294.7 823 36.3
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 8.2e-74 282.7 676 36.7
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 4.1e-73 280.4 690 37.1
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 1.5e-72 278.5 683 38.7
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 7.6e-72 276.2 660 37.4
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 1.4e-70 271.9 701 37.1
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 5.7e-67 260.0 665 35.5
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 4.1e-65 253.8 614 36.2
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 2.9e-63 247.7 317 52.1
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 3.2e-62 244.2 766 33.9
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 7.2e-62 243.0 665 35.6
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 9.4e-62 242.7 619 38.6
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 1.2e-61 242.3 659 35.7
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 7.9e-61 239.6 716 36.0
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 6.7e-60 236.5 586 36.0
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 6.7e-60 236.5 586 36.0
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 6.3e-58 229.9 691 33.1
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 8.2e-58 229.6 641 33.9
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 4.1e-57 227.3 747 32.8
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 6.9e-57 226.5 679 34.0
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 9.1e-57 226.1 814 31.7
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 7.7e-56 223.0 655 33.3
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 7.7e-56 223.0 669 32.3
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 3.8e-55 220.7 732 32.9
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 3.8e-55 220.7 671 33.2
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 5.0e-55 220.3 668 33.2
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 5.0e-55 220.3 668 33.2
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 8.5e-55 219.5 671 34.6
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 7.2e-54 216.5 799 30.7
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 3.9e-52 210.7 678 33.3
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 9.1e-49 199.5 775 32.6
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.8e-41 175.3 715 32.3
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 5.3e-41 173.7 513 31.4
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 1.2e-40 172.6 635 30.4
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 2.7e-37 161.4 430 36.3
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 3.6e-37 161.0 647 29.1
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.0e-31 142.9 518 31.7
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 1.6e-29 135.6 604 27.2
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 4.7e-29 134.0 733 28.2
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.5e-27 129.0 640 28.9
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 1.5e-27 129.0 640 28.9
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 5.4e-25 120.6 408 32.4
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 5.9e-24 117.1 649 28.8
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 5.6e-22 110.5 207 42.5
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 5.6e-14 84.0 174 39.7
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 2.0e-11 75.5 148 41.9
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 2.0e-11 75.5 79 57.0
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 1.9e-09 68.9 149 36.9
AagrBONN_evm.TU.Sc2ySwM_362.1405 Anthoceros agrestis HOM05D051179 ORTHO05D038399 3.3e-06 58.2 51 62.7


User provided reference genes

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