Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018093 Sechium edule HOM05D002277 ORTHO05D001770 2.1e-95 352.4 189 100.0
CsaV3_1G036680 Cucumis sativus L. HOM05D002277 ORTHO05D001770 1.4e-35 153.7 203 57.1
MELO3C020502.2 Cucumis melo HOM05D002277 ORTHO05D001770 2.7e-34 149.4 204 53.4
ClCG03G000230 Citrullus lanatus HOM05D002277 ORTHO05D001770 2.5e-32 142.9 210 51.0
Potri.019G127400 Populus trichocarpa HOM05D002277 ORTHO05D001770 4.8e-15 85.5 213 35.2
Potri.013G156100 Populus trichocarpa HOM05D002277 ORTHO05D001770 1.5e-13 80.5 207 30.9
Duzib212G0079 Durio zibethinus HOM05D002277 ORTHO05D001770 2.0e-13 80.1 160 38.1
Sabra13G0126000 Salix brachista HOM05D002277 ORTHO05D001770 1.3e-12 77.4 207 31.4
CiPaw.13G065900 Carya illinoinensis HOM05D002277 ORTHO05D001770 3.8e-12 75.9 176 31.2
Actinidia34486 Actinidia chinensis HOM05D002277 ORTHO05D001770 8.4e-12 74.7 170 33.5
Gohir.A10G149200 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.4e-11 73.9 138 37.7
Prupe.6G289800 Prunus persica HOM05D002277 ORTHO05D001770 1.9e-11 73.6 157 35.7
Thecc.09G361400 Theobroma cacao HOM05D002277 ORTHO05D001770 3.2e-11 72.8 200 32.5
RcHm_v2.0_Chr3g0460991 Rosa chinensis HOM05D002277 ORTHO05D001770 5.5e-11 72.0 89 47.2
FAN02G0282 Fragaria x ananassa HOM05D002277 ORTHO05D001770 9.3e-11 71.2 89 46.1
Cfa011806 Carpinus fangiana HOM05D002277 ORTHO05D001770 1.2e-10 70.9 91 42.9
Hma1.2p1_2270F.1_g318540 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 2.7e-10 69.7 214 30.4
TAR633G2754 Trochodendron aralioides HOM05D002277 ORTHO05D001770 2.7e-10 69.7 164 32.3
CiPaw.14G052400 Carya illinoinensis HOM05D002277 ORTHO05D001770 3.5e-10 69.3 203 33.0
Duzib268G1048 Durio zibethinus HOM05D002277 ORTHO05D001770 3.5e-10 69.3 157 34.4
Gohir.D10G117600 Gossypium hirsutum HOM05D002277 ORTHO05D001770 3.5e-10 69.3 139 38.1
Oeu027170.1 Olea europaea HOM05D002277 ORTHO05D001770 3.5e-10 69.3 170 32.4
Thecc.04G155300 Theobroma cacao HOM05D002277 ORTHO05D001770 3.5e-10 69.3 155 36.8
Psat2g051880 Pisum sativum HOM05D002277 ORTHO05D001770 4.6e-10 68.9 102 38.2
Cfa001229 Carpinus fangiana HOM05D002277 ORTHO05D001770 6.1e-10 68.6 158 43.0
ECA248G3276 Erigeron canadensis HOM05D002277 ORTHO05D001770 6.1e-10 68.6 159 35.2
Oeu011363.1 Olea europaea HOM05D002277 ORTHO05D001770 6.1e-10 68.6 162 32.1
FvH4_6g10240 Fragaria vesca HOM05D002277 ORTHO05D001770 1.0e-09 67.8 148 37.2
FAN14G3640 Fragaria x ananassa HOM05D002277 ORTHO05D001770 1.8e-09 67.0 150 36.7
CiPaw.09G218200 Carya illinoinensis HOM05D002277 ORTHO05D001770 2.3e-09 66.6 104 37.5
Lalb_Chr10g0103731 Lupinus albus HOM05D002277 ORTHO05D001770 2.3e-09 66.6 106 38.7
THA.LOC104800781 Tarenaya hassleriana HOM05D010829 ORTHO05D001770 2.3e-09 66.6 171 39.8
Manes.18G140500 Manihot esculenta HOM05D002277 ORTHO05D001770 3.0e-09 66.2 174 33.3
Peaxi162Scf00464g00005 Petunia axillaris HOM05D002277 ORTHO05D001770 3.0e-09 66.2 139 35.3
Gorai.011G129500 Gossypium raimondii HOM05D002277 ORTHO05D001770 5.1e-09 65.5 139 37.4
Lalb_Chr17g0345561 Lupinus albus HOM05D002277 ORTHO05D001770 5.1e-09 65.5 163 38.0
Cpa.g.sc2.326 Carica papaya HOM05D002277 ORTHO05D001770 6.7e-09 65.1 182 29.7
Cfa017063 Carpinus fangiana HOM05D002277 ORTHO05D001770 6.7e-09 65.1 149 35.6
LjContig00141g0024890 Lotus japonicus HOM05D002277 ORTHO05D001770 8.7e-09 64.7 115 37.4
Sc12g0000180 Simmondsia chinensis HOM05D002277 ORTHO05D001770 1.1e-08 64.3 202 32.2
COL.COLO4_30002 Corchorus olitorius HOM05D002277 ORTHO05D001770 3.3e-08 62.8 162 40.1
Haze_24445 Corylus avellana HOM05D002277 ORTHO05D001770 3.3e-08 62.8 65 49.2
Potri.006G107200 Populus trichocarpa HOM05D002277 ORTHO05D001770 3.3e-08 62.8 161 35.4
QL08p064469 Quercus lobata HOM05D002277 ORTHO05D001770 3.3e-08 62.8 141 34.8
TAR623G1362 Trochodendron aralioides HOM05D002277 ORTHO05D001770 3.3e-08 62.8 165 30.9
TAR636G1485 Trochodendron aralioides HOM05D002277 ORTHO05D001770 3.3e-08 62.8 142 33.8
A09p66660 Brassica napus HOM05D010829 ORTHO05D001770 4.3e-08 62.4 156 39.1
Glyma.09G277500 Glycine max HOM05D002277 ORTHO05D001770 4.3e-08 62.4 82 41.5
Manes.10G005600 Manihot esculenta HOM05D002277 ORTHO05D001770 4.3e-08 62.4 71 43.7
Aa31LG1G7990 Aethionema arabicum HOM05D010829 ORTHO05D001770 5.7e-08 62.0 152 31.6
TPR.G25757 Trifolium pratense HOM05D002277 ORTHO05D001770 5.7e-08 62.0 103 35.0
TAR629G0672 Trochodendron aralioides HOM05D002277 ORTHO05D001770 5.7e-08 62.0 142 33.8
BraA09t42006Z Brassica rapa HOM05D010829 ORTHO05D001770 7.4e-08 61.6 160 36.9
Hma1.2p1_1052F.1_g252370 Hydrangea macrophylla HOM05D002277 ORTHO05D001770 7.4e-08 61.6 140 35.0
Medtr5g075040 Medicago truncatula HOM05D002277 ORTHO05D001770 7.4e-08 61.6 93 39.8
QL07p032796 Quercus lobata HOM05D002277 ORTHO05D001770 7.4e-08 61.6 134 34.3
Gohir.A02G005000 Gossypium hirsutum HOM05D002277 ORTHO05D001770 9.7e-08 61.2 143 33.6
Rhsim01G0241900 Rhododendron simsii HOM05D002277 ORTHO05D001770 9.7e-08 61.2 175 29.1
Sabra06G0083400 Salix brachista HOM05D002277 ORTHO05D001770 9.7e-08 61.2 161 32.3
Glyma.18G211300 Glycine max HOM05D002277 ORTHO05D001770 1.3e-07 60.8 140 35.0
Oeu033238.1 Olea europaea HOM05D002277 ORTHO05D001770 1.3e-07 60.8 140 35.0
Sabra19G0125500 Salix brachista HOM05D002277 ORTHO05D001770 1.3e-07 60.8 89 40.4
Cc02_g05610 Coffea canephora HOM05D002277 ORTHO05D001770 1.6e-07 60.5 136 35.3
Sabra19G0129800 Salix brachista HOM05D002277 ORTHO05D001770 1.6e-07 60.5 89 41.6
TWI73G0449 Tripterygium wilfordii HOM05D002277 ORTHO05D001770 1.6e-07 60.5 106 39.6
DCAR_015348 Daucus carota HOM05D002277 ORTHO05D001770 2.2e-07 60.1 95 34.7
HanXRQChr11g0337191 Helianthus annuus HOM05D002277 ORTHO05D001770 2.2e-07 60.1 84 34.5
Atru.chr1.2541 Acer truncatum HOM05D002277 ORTHO05D001770 2.8e-07 59.7 84 40.5
Haze_21138 Corylus avellana HOM05D002277 ORTHO05D001770 2.8e-07 59.7 144 42.4
Haze_21144 Corylus avellana HOM05D002277 ORTHO05D001770 2.8e-07 59.7 144 42.4
Haze_21148 Corylus avellana HOM05D002277 ORTHO05D001770 2.8e-07 59.7 144 42.4
Gohir.D03G144700 Gossypium hirsutum HOM05D002277 ORTHO05D001770 2.8e-07 59.7 74 48.6
Lsat_1_v5_gn_5_175260 Lactuca sativa HOM05D002277 ORTHO05D001770 2.8e-07 59.7 139 33.8
Gorai.003G151900 Gossypium raimondii HOM05D002277 ORTHO05D001770 3.7e-07 59.3 74 50.0
Manes.08G172400 Manihot esculenta HOM05D002277 ORTHO05D001770 4.8e-07 58.9 95 40.0
QL01p025249 Quercus lobata HOM05D002277 ORTHO05D001770 4.8e-07 58.9 174 26.4
Glyma.02G234700 Glycine max HOM05D002277 ORTHO05D001770 6.3e-07 58.5 107 36.4
Nn2g13334 Nelumbo nucifera HOM05D002277 ORTHO05D001770 6.3e-07 58.5 87 39.1
Phvul.008G086700 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 6.3e-07 58.5 135 37.0
SalBow3G1041 Salvia bowleyana HOM05D002277 ORTHO05D001770 6.3e-07 58.5 155 32.3
Sed0026001 Sechium edule HOM05D002277 ORTHO05D001770 6.3e-07 58.5 166 31.3
MSTRG.8902 Avicennia marina HOM05D002277 ORTHO05D001770 8.2e-07 58.2 88 42.0
BcaC07g42035 Brassica carinata HOM05D010829 ORTHO05D001770 8.2e-07 58.2 154 33.8
CiPaw.01G304400 Carya illinoinensis HOM05D002277 ORTHO05D001770 8.2e-07 58.2 103 39.8
Gohir.A03G023900 Gossypium hirsutum HOM05D002277 ORTHO05D001770 8.2e-07 58.2 74 47.3
VMungo1383G3736 Vigna mungo HOM05D002277 ORTHO05D001770 8.2e-07 58.2 137 35.8
Thhalv10008904m.g Eutrema salsugineum HOM05D010829 ORTHO05D001770 1.1e-06 57.8 166 33.7
Gohir.D02G005400 Gossypium hirsutum HOM05D002277 ORTHO05D001770 1.1e-06 57.8 114 36.0
Medtr7g072540 Medicago truncatula HOM05D002277 ORTHO05D001770 1.1e-06 57.8 68 47.1
Nitab4.5_0000263g0230 Nicotiana tabacum HOM05D002277 ORTHO05D001770 1.1e-06 57.8 153 32.7
MSTRG.27280 Avicennia marina HOM05D002277 ORTHO05D001770 1.4e-06 57.4 195 30.3
Nitab4.5_0004650g0010 Nicotiana tabacum HOM05D002277 ORTHO05D001770 1.4e-06 57.4 153 33.3
Prupe.6G043800 Prunus persica HOM05D002277 ORTHO05D001770 1.8e-06 57.0 178 33.7
Rhsim03G0150300 Rhododendron simsii HOM05D002277 ORTHO05D001770 1.8e-06 57.0 87 39.1
PGSC0003DMG400029071 Solanum tuberosum HOM05D002277 ORTHO05D001770 1.8e-06 57.0 140 32.9
Ciclev10012858m.g Citrus clementina HOM05D002277 ORTHO05D001770 2.4e-06 56.6 156 30.1
Glyma.11G235700 Glycine max HOM05D002277 ORTHO05D001770 2.4e-06 56.6 88 36.4
Glyma.18G021200 Glycine max HOM05D002277 ORTHO05D001770 2.4e-06 56.6 105 36.2
Nitab4.5_0001234g0090 Nicotiana tabacum HOM05D002277 ORTHO05D001770 2.4e-06 56.6 149 31.5
MELO3C019998.2 Cucumis melo HOM05D002277 ORTHO05D001770 3.1e-06 56.2 101 33.7
Manes.07G138400 Manihot esculenta HOM05D002277 ORTHO05D001770 3.1e-06 56.2 89 39.3
Phvul.008G249000 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 3.1e-06 56.2 81 40.7
SGA_v2.0_scaffold60G20916 Striga asiatica HOM05D002277 ORTHO05D001770 3.1e-06 56.2 109 38.5
TPR.G4419 Trifolium pratense HOM05D002277 ORTHO05D001770 3.1e-06 56.2 68 47.1
Lj2C62G11 Lonicera japonica HOM05D002277 ORTHO05D001770 4.1e-06 55.8 87 40.2
RcHm_v2.0_Chr1g0371651 Rosa chinensis HOM05D002277 ORTHO05D001770 4.1e-06 55.8 158 41.1
CDE04G2385 Ceratophyllum demersum HOM05D002277 ORTHO05D001770 5.3e-06 55.5 86 39.5
Thhalv10006243m.g Eutrema salsugineum HOM05D010959 ORTHO05D001770 5.3e-06 55.5 73 43.8
Peaxi162Scf00167g00134 Petunia axillaris HOM05D002277 ORTHO05D001770 5.3e-06 55.5 143 32.9
Phvul.001G249100 Phaseolus vulgaris HOM05D002277 ORTHO05D001770 5.3e-06 55.5 144 36.1
BcaC07g39943 Brassica carinata HOM05D010959 ORTHO05D001770 6.9e-06 55.1 68 42.6
A09p49240 Brassica napus HOM05D010959 ORTHO05D001770 6.9e-06 55.1 68 42.6
C08p31590 Brassica napus HOM05D010959 ORTHO05D001770 6.9e-06 55.1 68 42.6
BolC8t50780H Brassica oleracea HOM05D010959 ORTHO05D001770 6.9e-06 55.1 68 42.6
BraA09t40377Z Brassica rapa HOM05D010959 ORTHO05D001770 6.9e-06 55.1 68 42.6
Gorai.005G006100 Gossypium raimondii HOM05D002277 ORTHO05D001770 6.9e-06 55.1 129 35.7
Lj1g0022794 Lotus japonicus HOM05D002277 ORTHO05D001770 6.9e-06 55.1 68 45.6
VMungo0647G0196 Vigna mungo HOM05D002277 ORTHO05D001770 6.9e-06 55.1 94 36.2
Actinidia29050 Actinidia chinensis HOM05D002277 ORTHO05D001770 9.0e-06 54.7 87 37.9
Ciclev10002474m.g Citrus clementina HOM05D002277 ORTHO05D001770 9.0e-06 54.7 170 30.0
Eucgr.J00136 Eucalyptus grandis HOM05D002277 ORTHO05D001770 9.0e-06 54.7 92 39.1
Oeu058656.1 Olea europaea HOM05D002277 ORTHO05D001770 9.0e-06 54.7 149 30.9
Peaxi162Scf01078g00031 Petunia axillaris HOM05D002277 ORTHO05D001770 9.0e-06 54.7 99 38.4


User provided reference genes

Program Settings