Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018073 Sechium edule HOM05D004535 ORTHO05D005341 0.0e+00 3560.8 1802 100.0
ClCG10G004180 Citrullus lanatus HOM05D004535 ORTHO05D005341 0.0e+00 3267.6 1816 91.5
MELO3C014086.2 Cucumis melo HOM05D004535 ORTHO05D005341 0.0e+00 3228.7 1804 90.6
CsaV3_3G003990 Cucumis sativus L. HOM05D004535 ORTHO05D005341 0.0e+00 3174.4 1804 89.1
Prupe.6G032900 Prunus persica HOM05D004535 ORTHO05D005341 0.0e+00 2797.3 1818 77.3
MD11G1042000 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2783.1 1817 76.9
Dinv19653 Davidia involucrata HOM05D004535 ORTHO05D005341 0.0e+00 2763.0 1822 76.2
GSVIVG01014769001 Vitis vinifera HOM05D004535 ORTHO05D005341 0.0e+00 2763.0 1818 76.4
Atru.chr2.3782 Acer truncatum HOM05D004535 ORTHO05D005341 0.0e+00 2761.5 1817 76.2
CANSAT11G1644 Cannabis sativa HOM05D004535 ORTHO05D005341 0.0e+00 2754.5 1819 76.4
CiPaw.11G209600 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2753.8 1819 76.1
RcHm_v2.0_Chr5g0075021 Rosa chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2750.3 1820 75.7
MD03G1040600 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 2746.5 1816 75.8
FAN21G2952 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2744.1 1819 75.5
FAN16G2454 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2740.7 1820 75.6
FAN11G1653 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2740.3 1820 75.6
Ciclev10007234m.g Citrus clementina HOM05D004535 ORTHO05D005341 0.0e+00 2738.8 1824 75.5
FAN25G2892 Fragaria x ananassa HOM05D004535 ORTHO05D005341 0.0e+00 2734.5 1820 75.6
Manes.01G005500 Manihot esculenta HOM05D004535 ORTHO05D005341 0.0e+00 2721.8 1818 75.6
Potri.001G470600 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 2713.3 1818 74.8
Gorai.009G454100 Gossypium raimondii HOM05D004535 ORTHO05D005341 0.0e+00 2712.9 1804 75.4
Hma1.2p1_0193F.1_g084240 Hydrangea macrophylla HOM05D004535 ORTHO05D005341 0.0e+00 2709.1 1815 74.3
CSS0018371 Camellia sinensis var. sinensis HOM05D004535 ORTHO05D005341 0.0e+00 2708.7 1815 74.9
Rhsim04G0008600 Rhododendron simsii HOM05D004535 ORTHO05D005341 0.0e+00 2689.4 1832 73.6
Thecc.07G003100 Theobroma cacao HOM05D004535 ORTHO05D005341 0.0e+00 2689.4 1765 76.4
Lj1C898T24 Lonicera japonica HOM05D004535 ORTHO05D005341 0.0e+00 2687.9 1832 74.1
QL08p000781 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2675.6 1773 76.9
TWI38G2299 Tripterygium wilfordii HOM05D004535 ORTHO05D005341 0.0e+00 2672.9 1820 74.0
TAR627G0331 Trochodendron aralioides HOM05D004535 ORTHO05D005341 0.0e+00 2666.3 1818 73.0
Glyma.18G071500 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2665.2 1818 73.4
Haze_09903 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2657.5 1856 73.7
PGR083G0052 Punica granatum HOM05D004535 ORTHO05D005341 0.0e+00 2657.1 1814 72.8
Glyma.08G336400 Glycine max HOM05D004535 ORTHO05D005341 0.0e+00 2654.0 1820 73.2
Lj6g0015552 Lotus japonicus HOM05D004535 ORTHO05D005341 0.0e+00 2648.6 1818 72.6
Gohir.D05G387450 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2645.9 1804 74.0
Psat5g164120 Pisum sativum HOM05D004535 ORTHO05D005341 0.0e+00 2645.2 1822 72.9
vmacro09603 Vaccinium macrocarpon HOM05D004535 ORTHO05D005341 0.0e+00 2644.8 1923 70.2
Lalb_Chr20g0115261 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2643.6 1821 72.6
Lalb_Chr18g0050431 Lupinus albus HOM05D004535 ORTHO05D005341 0.0e+00 2642.1 1819 72.8
FvH4_3g41830 Fragaria vesca HOM05D004535 ORTHO05D005341 0.0e+00 2638.2 1760 75.2
Phvul.006G061700 Phaseolus vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2637.4 1817 72.7
Medtr3g461520 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2635.9 1819 72.7
Sabra11G0138700 Salix brachista HOM05D004535 ORTHO05D005341 0.0e+00 2635.9 1973 68.5
Eucgr.F02001 Eucalyptus grandis HOM05D004535 ORTHO05D005341 0.0e+00 2617.4 1813 71.6
Duzib213G0320 Durio zibethinus HOM05D004535 ORTHO05D005341 0.0e+00 2615.5 1819 73.2
arahy.Tifrunner.gnm1.ann1.DDNH16 Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2610.5 1895 69.4
TPR.G14720 Trifolium pratense HOM05D004535 ORTHO05D005341 0.0e+00 2605.5 1818 71.5
Thhalv10019881m.g Eutrema salsugineum HOM05D004535 ORTHO05D005341 0.0e+00 2575.8 1814 71.7
BcaB04g18753 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2573.1 1819 71.4
Solyc07g066030.4 Solanum lycopersicum HOM05D004535 ORTHO05D005341 0.0e+00 2568.1 1819 71.0
Sopen07g034220 Solanum pennellii HOM05D004535 ORTHO05D005341 0.0e+00 2567.0 1819 71.1
AL3G25150 Arabidopsis lyrata HOM05D004535 ORTHO05D005341 0.0e+00 2558.5 1816 71.2
THA.LOC104822705 Tarenaya hassleriana HOM05D004535 ORTHO05D005341 0.0e+00 2556.6 1817 70.7
Carub.0003s1271 Capsella rubella HOM05D004535 ORTHO05D005341 0.0e+00 2552.3 1815 71.0
VMungo0540G2510 Vigna mungo HOM05D004535 ORTHO05D005341 0.0e+00 2550.4 1760 72.8
AT3G13330 Arabidopsis thaliana HOM05D004535 ORTHO05D005341 0.0e+00 2550.0 1816 71.0
BolC3t16899H Brassica oleracea HOM05D004535 ORTHO05D005341 0.0e+00 2549.2 1816 70.9
BraA03t12967Z Brassica rapa HOM05D004535 ORTHO05D005341 0.0e+00 2549.2 1815 70.9
HanXRQChr03g0079281 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2547.7 1817 70.5
BcaC01g03999 Brassica carinata HOM05D004535 ORTHO05D005341 0.0e+00 2545.8 1815 70.8
A03p38140 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2545.8 1815 70.7
Sc20g0000040 Simmondsia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2543.8 1818 70.7
C03p46300 Brassica napus HOM05D004535 ORTHO05D005341 0.0e+00 2542.3 1815 70.8
Aqoxy4G02281 Aquilegia oxysepala HOM05D004535 ORTHO05D005341 0.0e+00 2540.8 1815 69.5
Aa31LG8G550 Aethionema arabicum HOM05D004535 ORTHO05D005341 0.0e+00 2533.8 1814 70.3
CARHR087940 Cardamine hirsuta HOM05D004535 ORTHO05D005341 0.0e+00 2530.7 1817 70.7
ECA240G2049 Erigeron canadensis HOM05D004535 ORTHO05D005341 0.0e+00 2528.4 1815 70.2
Cc05_g15580 Coffea canephora HOM05D004535 ORTHO05D005341 0.0e+00 2526.9 1826 70.4
Sp3g11530 Schrenkiella parvula HOM05D004535 ORTHO05D005341 0.0e+00 2519.2 1816 70.0
Gohir.A04G001901 Gossypium hirsutum HOM05D004535 ORTHO05D005341 0.0e+00 2513.4 1675 75.8
EL10Ac4g07499 Beta vulgaris HOM05D004535 ORTHO05D005341 0.0e+00 2505.7 1814 69.3
PSO210G5731 Papaver somniferum HOM05D004535 ORTHO05D005341 0.0e+00 2500.7 1817 69.3
AUR62035634 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2489.1 1819 69.2
Migut.M01591 Erythranthe guttata HOM05D004535 ORTHO05D005341 0.0e+00 2489.1 1817 69.1
AUR62017172 Chenopodium quinoa HOM05D004535 ORTHO05D005341 0.0e+00 2482.6 1831 68.7
Nitab4.5_0001303g0050 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2463.3 1803 69.2
MSTRG.15824 Avicennia marina HOM05D004535 ORTHO05D005341 0.0e+00 2460.3 1817 68.1
Oeu013013.2 Olea europaea HOM05D004535 ORTHO05D005341 0.0e+00 2456.0 1893 66.7
HanXRQChr13g0409231 Helianthus annuus HOM05D004535 ORTHO05D005341 0.0e+00 2455.6 1816 68.5
Lsat_1_v5_gn_9_89621 Lactuca sativa HOM05D004535 ORTHO05D005341 0.0e+00 2453.3 1811 69.0
SalBow8G3417 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2436.4 1844 66.9
QL08p000755 Quercus lobata HOM05D004535 ORTHO05D005341 0.0e+00 2434.8 1945 65.1
Medtr3g461500 Medicago truncatula HOM05D004535 ORTHO05D005341 0.0e+00 2407.9 1854 66.8
MBI15_g37116_MAGBIO Magnolia biondii HOM05D004535 ORTHO05D005341 0.0e+00 2402.1 1790 67.7
Hund22978 Selenicereus undatus HOM05D004535 ORTHO05D005341 0.0e+00 2401.3 1816 67.5
Peaxi162Scf00232g00530 Petunia axillaris HOM05D004535 ORTHO05D005341 0.0e+00 2385.1 1835 67.4
SalBow8G2487 Salvia bowleyana HOM05D004535 ORTHO05D005341 0.0e+00 2375.5 1825 65.6
Ah.06g180940 Amaranthus hybridus HOM05D004535 ORTHO05D005341 0.0e+00 2370.5 1835 65.9
Haze_09904 Corylus avellana HOM05D004535 ORTHO05D005341 0.0e+00 2370.5 1904 65.7
Nn1g08312 Nelumbo nucifera HOM05D004535 ORTHO05D005341 0.0e+00 2353.2 1626 73.3
DCAR_013765 Daucus carota HOM05D004535 ORTHO05D005341 0.0e+00 2339.3 1812 65.9
HPP92_018915 Vanilla planifolia HOM05D004535 ORTHO05D005341 0.0e+00 2289.2 1824 63.0
Actinidia03667 Actinidia chinensis HOM05D004535 ORTHO05D005341 0.0e+00 2280.4 1561 74.9
ATR0751G071 Amborella trichopoda HOM05D004535 ORTHO05D005341 0.0e+00 2250.3 1824 62.7
Nitab4.5_0000152g0130 Nicotiana tabacum HOM05D004535 ORTHO05D005341 0.0e+00 2227.6 1652 69.2
CiPaw.12G142100 Carya illinoinensis HOM05D004535 ORTHO05D005341 0.0e+00 2195.6 1678 67.2
Ca_14867_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 0.0e+00 2160.6 1517 71.5
Cpa.g.sc12.80 Carica papaya HOM05D004535 ORTHO05D005341 0.0e+00 2154.4 1740 65.2
arahy.Tifrunner.gnm1.ann1.HJC4WF Arachis hypogaea HOM05D004535 ORTHO05D005341 0.0e+00 2133.2 1440 72.9
Zm00001eb281130 Zea mays HOM05D004535 ORTHO05D005341 0.0e+00 2080.8 1815 59.0
MD00G1206400 Malus domestica HOM05D004535 ORTHO05D005341 0.0e+00 1812.0 1251 73.7
CDE05G3236 Ceratophyllum demersum HOM05D004535 ORTHO05D005341 0.0e+00 1753.8 1443 62.8
Potri.011G167700 Populus trichocarpa HOM05D004535 ORTHO05D005341 0.0e+00 1750.7 1147 75.1
unitig_699.g19598 Utricularia gibba HOM05D004535 ORTHO05D005341 0.0e+00 1626.7 1819 50.6
PGSC0003DMG401022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 0.0e+00 1396.3 947 73.1
Mapoly0071s0029 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1391.7 1932 41.8
AagrBONN_evm.TU.Sc2ySwM_228.5886 Anthoceros agrestis HOM05D004535 ORTHO05D005341 0.0e+00 1382.1 1857 42.3
Pp3c20_11540 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1375.1 1853 42.0
Mapoly0069s0005 Marchantia polymorpha HOM05D004535 ORTHO05D005341 0.0e+00 1302.7 1869 39.2
Pp3c15_5520 Physcomitrium patens HOM05D004535 ORTHO05D005341 0.0e+00 1208.0 1828 38.9
SMO184G0002 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1200.7 1856 38.4
SMO340G0109 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 0.0e+00 1165.2 1833 37.5
CAN.G623.63 Capsicum annuum HOM05D004535 ORTHO05D005341 0.0e+00 1151.0 863 68.7
SMO239G0001 Selaginella moellendorffii HOM05D004535 ORTHO05D005341 2.9e-303 1046.2 1835 35.9
Ca_14861_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 3.3e-299 1032.7 721 71.0
CAN.G623.64 Capsicum annuum HOM05D004535 ORTHO05D005341 1.6e-293 1013.8 954 57.9
CBR_g24134 Chara braunii HOM05D004535 ORTHO05D005341 2.0e-272 943.7 1953 33.1
COL.COLO4_07778 Corchorus olitorius HOM05D004535 ORTHO05D005341 9.2e-249 865.1 1169 46.4
Os06g0301300 Oryza sativa ssp. japonica HOM05D004535 ORTHO05D005341 2.5e-246 857.1 689 61.8
Potri.011G167650 Populus trichocarpa HOM05D004535 ORTHO05D005341 3.9e-207 726.9 504 73.4
Actinidia00829 Actinidia chinensis HOM05D004535 ORTHO05D005341 2.3e-167 594.7 613 56.9
QL10p044954 Quercus lobata HOM05D004535 ORTHO05D005341 2.1e-144 518.5 630 50.0
SEGI_13123 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.5e-137 495.0 457 54.0
MCO11G531 Micromonas commoda HOM05D004535 ORTHO05D005341 7.3e-129 466.8 1927 26.0
Ca_14860_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 7.8e-123 446.8 339 68.1
VMungo0540G1109 Vigna mungo HOM05D004535 ORTHO05D005341 2.4e-111 408.7 322 64.6
SEGI_38328 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 1.5e-110 406.0 468 46.8
Actinidia00827 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.6e-104 386.0 301 64.5
MD00G1206600 Malus domestica HOM05D004535 ORTHO05D005341 6.2e-104 384.0 220 77.3
MD00G1206500 Malus domestica HOM05D004535 ORTHO05D005341 1.3e-101 376.3 247 80.6
VMungo1127G2045 Vigna mungo HOM05D004535 ORTHO05D005341 2.8e-96 358.6 271 67.9
PRCOL_00006556 Prasinoderma coloniale HOM05D004535 ORTHO05D005341 4.2e-84 318.2 1689 23.9
SEGI_32129 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 5.1e-82 311.2 359 52.1
Actinidia03668 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.8e-79 302.8 225 63.1
Nn1g08306 Nelumbo nucifera HOM05D004535 ORTHO05D005341 1.3e-72 280.0 167 74.9
arahy.Tifrunner.gnm1.ann1.P6R29M Arachis hypogaea HOM05D004535 ORTHO05D005341 1.8e-71 276.2 346 47.7
SEGI_15666 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.5e-36 159.5 138 61.6
Cpa.g.sc12.82 Carica papaya HOM05D004535 ORTHO05D005341 7.2e-36 157.9 102 79.4
Cre14.g628702 Chlamydomonas reinhardtii HOM05D004535 ORTHO05D005341 1.8e-34 153.3 651 25.0
Actinidia00828 Actinidia chinensis HOM05D004535 ORTHO05D005341 1.7e-32 146.7 210 42.9
arahy.Tifrunner.gnm1.ann1.A7P7U5 Arachis hypogaea HOM05D004535 ORTHO05D005341 1.4e-23 117.1 107 62.6
Cfa027001 Carpinus fangiana HOM05D004535 ORTHO05D005341 3.9e-21 109.0 585 21.9
PSO541G1144 Papaver somniferum HOM05D004535 ORTHO05D005341 6.6e-21 108.2 76 63.2
Ca_31034_v3 Cicer arietinum L. HOM05D004535 ORTHO05D005341 2.5e-20 106.3 72 73.6
Lsat_1_v5_gn_0_5420 Lactuca sativa HOM05D004535 ORTHO05D005341 9.5e-20 104.4 75 58.7
Psat5g106440 Pisum sativum HOM05D004535 ORTHO05D005341 8.0e-19 101.3 65 80.0
arahy.Tifrunner.gnm1.ann1.QBA8JR Arachis hypogaea HOM05D004535 ORTHO05D005341 1.0e-18 100.9 160 43.8
arahy.Tifrunner.gnm1.ann1.6S2B7N Arachis hypogaea HOM05D012221 ORTHO05D005341 3.1e-18 99.4 114 50.9
VMungo1215G1327 Vigna mungo HOM05D004535 ORTHO05D005341 4.4e-17 95.5 76 64.5
arahy.Tifrunner.gnm1.ann1.EHT35G Arachis hypogaea HOM05D004535 ORTHO05D005341 2.4e-15 89.7 108 49.1
VMungo0110G0001 Vigna mungo HOM05D004535 ORTHO05D005341 6.0e-14 85.1 69 59.4
arahy.Tifrunner.gnm1.ann1.HQ6FCP Arachis hypogaea HOM05D004535 ORTHO05D005341 7.3e-12 78.2 169 39.1
SEGI_18126 Sequoiadendron giganteum HOM05D004535 ORTHO05D005341 2.8e-11 76.3 72 43.1
PGSC0003DMG402022150 Solanum tuberosum HOM05D004535 ORTHO05D005341 8.9e-10 71.2 96 42.7
Psat4g112520 Pisum sativum HOM05D004535 ORTHO05D005341 4.4e-09 68.9 71 56.3
CSS0045016 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000018 1.2e-06 60.8 71 46.5


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