Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.6e-72 276.2 159 100.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.0e-62 242.7 159 88.7
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 3.4e-62 241.9 159 88.1
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.9e-58 228.8 152 87.5
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.5e-54 216.5 156 82.7
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 2.6e-54 215.7 157 82.2
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.2e-53 212.6 158 79.7
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.7e-53 211.8 154 79.9
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 4.9e-53 211.5 161 78.9
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.4e-52 209.9 154 79.2
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.4e-52 209.9 155 78.7
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 1.8e-52 209.5 158 79.7
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 3.2e-52 208.8 163 76.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 3.2e-52 208.8 157 78.3
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 4.1e-52 208.4 161 78.9
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 4.1e-52 208.4 154 79.2
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 5.4e-52 208.0 156 77.6
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 9.2e-52 207.2 159 76.7
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.2e-51 206.8 158 76.6
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 2.0e-51 206.1 156 76.9
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 2.0e-51 206.1 158 78.5
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.0e-51 206.1 160 79.4
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 2.7e-51 205.7 156 79.5
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.7e-51 205.7 157 77.1
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 3.5e-51 205.3 162 74.1
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 5.0e-50 201.4 148 81.1
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 8.6e-50 200.7 161 79.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 8.6e-50 200.7 156 75.6
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 8.6e-50 200.7 159 74.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.1e-49 200.3 153 79.7
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.9e-49 199.5 158 77.2
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 1.9e-49 199.5 158 77.8
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 3.3e-49 198.7 163 76.1
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 4.3e-49 198.4 159 74.8
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.2e-48 196.8 157 74.5
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.2e-48 196.8 157 74.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.2e-48 196.8 155 76.8
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 3.6e-48 195.3 157 77.1
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 3.6e-48 195.3 161 75.8
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 4.7e-48 194.9 165 75.2
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 8.0e-48 194.1 153 78.4
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 2.3e-47 192.6 161 74.5
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.3e-47 192.6 150 79.3
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 3.1e-47 192.2 157 77.1
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 4.0e-47 191.8 148 79.1
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 6.8e-47 191.0 163 76.1
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.5e-46 189.9 166 71.7
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 3.4e-46 188.7 160 72.5
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 9.8e-46 187.2 159 70.4
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.7e-45 186.4 148 76.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 8.3e-45 184.1 151 75.5
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 8.3e-45 184.1 192 52.1
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.4e-44 183.3 162 72.8
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.4e-44 183.3 153 73.2
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 5.4e-44 181.4 160 71.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 7.0e-44 181.0 145 73.8
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 7.0e-44 181.0 157 69.4
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 9.2e-44 180.6 160 70.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 9.2e-44 180.6 163 69.9
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 9.2e-44 180.6 159 73.0
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.6e-43 179.9 196 61.7
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 2.0e-43 179.5 151 72.8
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 4.6e-43 178.3 161 71.4
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 7.8e-43 177.6 159 69.2
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 1.0e-42 177.2 195 61.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.3e-42 176.8 160 70.6
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 1.7e-42 176.4 149 73.2
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 2.3e-42 176.0 160 70.0
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 3.0e-42 175.6 159 68.6
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 5.0e-42 174.9 161 70.8
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 5.0e-42 174.9 160 70.0
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 5.0e-42 174.9 160 67.5
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 6.6e-42 174.5 149 72.5
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.5e-41 173.3 159 68.6
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.9e-41 172.9 156 69.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 3.3e-41 172.2 156 69.9
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 4.3e-41 171.8 156 69.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 7.3e-41 171.0 153 71.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 7.3e-41 171.0 157 71.3
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 9.5e-41 170.6 156 69.2
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.8e-39 166.4 123 80.5
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-39 165.2 152 67.8
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 4.0e-39 165.2 152 67.8
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.2e-39 164.9 152 67.8
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 5.2e-39 164.9 152 67.8
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.2e-38 163.7 148 73.0
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.0e-38 162.9 168 56.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 7.5e-38 161.0 165 63.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 1.1e-36 157.1 124 75.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.5e-35 152.1 182 49.5
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.9e-34 148.7 151 61.6
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 6.6e-34 147.9 155 64.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.9e-33 146.4 115 73.9
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 5.6e-33 144.8 153 51.6
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 8.9e-31 137.5 100 73.0
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 8.9e-31 137.5 119 70.6
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.4e-30 135.6 145 60.0
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.9e-29 132.5 127 57.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.1e-28 130.6 105 67.6
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 3.9e-26 122.1 148 48.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 2.1e-24 116.3 160 51.9
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 8.9e-23 110.9 96 60.4
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 7.1e-20 101.3 149 45.6
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 5.6e-17 91.7 97 54.6
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 6.9e-15 84.7 91 51.6
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.1e-12 77.4 60 63.3
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 2.1e-11 73.2 60 58.3
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 6.6e-10 68.2 91 42.9
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 1.8e-07 60.1 61 54.1


User provided reference genes

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