Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 1.7e-43 180.3 230 100.0
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 4.4e-23 112.5 106 73.6
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 5.8e-23 112.1 101 80.2
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.1e-21 107.8 108 67.6
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 4.6e-20 102.4 90 71.1
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.0e-19 101.3 87 73.6
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 5.1e-19 99.0 87 69.0
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.1e-18 97.8 95 66.3
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.8e-17 93.2 72 76.4
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.4e-16 90.9 81 69.1
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.4e-16 90.9 81 69.1
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 1.8e-16 90.5 88 62.5
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.1e-16 89.7 83 69.9
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 5.3e-16 89.0 84 65.5
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 6.9e-16 88.6 87 65.5
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 9.0e-16 88.2 86 65.1
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 3.4e-15 86.3 76 81.6
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 4.5e-15 85.9 88 63.6
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 9.9e-15 84.7 92 58.7
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.7e-14 84.0 72 72.2
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 1.7e-14 84.0 83 65.1
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 2.2e-14 83.6 76 78.9
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.1e-13 81.3 84 61.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 1.4e-13 80.9 73 65.8
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.4e-13 80.9 90 57.8
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.9e-13 80.5 89 58.4
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 3.2e-13 79.7 70 68.6
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 4.2e-13 79.3 85 64.7
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 9.3e-13 78.2 102 62.7
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.3e-13 78.2 85 56.5
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.2e-12 77.8 108 52.8
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.2e-12 77.8 84 60.7
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.6e-12 77.4 85 61.2
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 1.6e-12 77.4 56 75.0
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 2.1e-12 77.0 70 70.0
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 2.1e-12 77.0 82 63.4
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.1e-12 77.0 83 61.4
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 3.5e-12 76.3 86 58.1
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 3.5e-12 76.3 78 65.4
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 3.5e-12 76.3 75 68.0
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 4.6e-12 75.9 88 55.7
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 4.6e-12 75.9 88 55.7
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 6.0e-12 75.5 90 56.7
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 6.0e-12 75.5 86 55.8
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 6.0e-12 75.5 81 61.7
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 7.9e-12 75.1 65 70.8
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 7.9e-12 75.1 81 59.3
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 1.0e-11 74.7 74 63.5
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.0e-11 74.7 71 64.8
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 1.3e-11 74.3 61 67.2
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.3e-11 74.3 91 61.5
Aa31LG11G7390 Aethionema arabicum HOM05D012923 ORTHO05D014747 1.8e-11 73.9 61 65.6
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 2.3e-11 73.6 72 63.9
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 2.3e-11 73.6 78 62.8
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 2.3e-11 73.6 77 55.8
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 2.3e-11 73.6 80 58.8
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.3e-11 73.6 75 65.3
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.3e-11 73.6 88 60.2
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 3.0e-11 73.2 74 60.8
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.9e-11 72.8 93 54.8
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 3.9e-11 72.8 89 57.3
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.1e-11 72.4 86 57.0
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 5.1e-11 72.4 89 56.2
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 6.7e-11 72.0 87 54.0
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 8.7e-11 71.6 84 52.4
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.1e-10 71.2 76 60.5
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.9e-10 70.5 81 59.3
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 3.3e-10 69.7 78 57.7
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 4.3e-10 69.3 95 56.8
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.3e-10 69.3 72 59.7
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 4.3e-10 69.3 128 42.2
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 9.6e-10 68.2 63 68.3
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.6e-09 67.4 56 71.4
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.6e-09 67.4 61 67.2
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.1e-09 67.0 78 55.1
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 3.7e-09 66.2 62 64.5
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 4.8e-09 65.9 77 57.1
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 4.8e-09 65.9 92 48.9
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 8.1e-09 65.1 72 59.7
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 8.1e-09 65.1 64 67.2
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 8.1e-09 65.1 79 55.7
MELO3C023199.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.1e-08 64.7 55 70.9
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 1.4e-08 64.3 73 64.4
Rhsim10G0131200 Rhododendron simsii HOM05D003347 ORTHO05D003821 1.4e-08 64.3 48 77.1
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 1.4e-08 64.3 72 55.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 1.4e-08 64.3 85 50.6
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 2.4e-08 63.5 73 53.4
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 2.4e-08 63.5 81 53.1
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 3.1e-08 63.2 84 53.6
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.0e-08 62.8 74 58.1
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 5.3e-08 62.4 76 56.6
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 5.3e-08 62.4 70 57.1
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 5.3e-08 62.4 87 51.7
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 6.9e-08 62.0 73 52.1
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 6.9e-08 62.0 47 76.6
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 9.0e-08 61.6 72 55.6
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 1.5e-07 60.8 57 64.9
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.6e-07 60.1 68 57.4
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 2.6e-07 60.1 73 54.8
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 3.4e-07 59.7 44 75.0
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.5e-07 59.3 90 47.8
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 5.8e-07 58.9 76 53.9
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 5.8e-07 58.9 79 53.2
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 1.0e-06 58.2 46 73.9
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.0e-06 58.2 79 51.9
FAN19G3034 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.0e-06 58.2 50 66.0
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.0e-06 58.2 73 53.4
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 1.0e-06 58.2 72 55.6
ClCG02G000100 Citrullus lanatus HOM05D003347 ORTHO05D003821 1.7e-06 57.4 38 84.2
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.2e-06 57.0 74 54.1
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 2.9e-06 56.6 81 53.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 3.8e-06 56.2 92 48.9
CARHR200100 Cardamine hirsuta HOM05D012923 ORTHO05D014747 8.4e-06 55.1 56 55.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 8.4e-06 55.1 107 43.0
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 8.4e-06 55.1 48 62.5
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 8.4e-06 55.1 72 56.9


User provided reference genes

Program Settings