Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 2.7e-166 588.6 298 100.0
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 9.6e-119 430.6 322 72.4
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 8.4e-107 391.0 307 72.0
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 3.3e-103 379.0 306 70.3
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 2.6e-68 263.1 210 71.0
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 1.1e-66 257.7 299 51.8
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.9e-66 256.9 313 50.8
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 2.5e-66 256.5 290 52.8
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 5.5e-66 255.4 295 51.5
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.2e-66 255.0 321 50.5
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 1.2e-65 254.2 304 51.6
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.6e-65 253.8 318 50.6
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 6.1e-65 251.9 311 48.6
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 3.9e-64 249.2 306 49.3
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 6.7e-64 248.4 318 50.0
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 8.8e-64 248.1 302 49.3
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 1.5e-63 247.3 350 45.7
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 5.7e-63 245.4 315 47.3
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.7e-62 243.8 291 48.5
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 2.8e-62 243.0 291 48.8
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.3e-61 238.8 290 47.9
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 9.1e-61 238.0 326 47.5
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 2.0e-60 236.9 319 47.0
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 7.7e-60 235.0 215 58.6
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.3e-59 234.2 330 45.8
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 1.3e-59 234.2 330 45.8
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 5.0e-59 232.3 295 48.1
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.1e-58 231.1 196 61.7
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 1.1e-58 231.1 301 44.9
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 1.6e-57 227.3 309 44.0
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 2.1e-57 226.9 288 50.0
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 4.7e-57 225.7 313 45.0
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 4.7e-57 225.7 259 53.3
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 1.4e-56 224.2 315 44.4
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 3.0e-56 223.0 363 40.8
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 6.7e-56 221.9 321 42.1
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 8.8e-56 221.5 175 64.6
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 1.1e-55 221.1 301 45.8
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 1.5e-55 220.7 247 52.2
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 3.3e-55 219.5 300 46.7
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 9.7e-55 218.0 305 44.6
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.3e-54 217.6 300 45.7
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 1.3e-54 217.6 300 45.3
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.7e-54 217.2 337 44.2
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 2.8e-54 216.5 298 45.6
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 3.7e-54 216.1 297 46.8
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 3.7e-54 216.1 196 57.7
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 6.3e-54 215.3 223 52.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 8.2e-54 214.9 308 44.8
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 8.2e-54 214.9 323 44.0
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 3.1e-53 213.0 227 52.9
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 3.1e-53 213.0 306 45.1
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 5.3e-53 212.2 296 44.9
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 2.7e-52 209.9 170 63.5
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 4.5e-52 209.1 305 45.9
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 4.5e-52 209.1 302 43.4
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.3e-51 207.6 285 44.6
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.7e-51 207.2 229 52.0
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.8e-51 206.1 287 44.9
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 1.5e-50 204.1 227 52.0
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 1.9e-50 203.8 170 61.8
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 1.9e-50 203.8 333 42.3
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 1.9e-50 203.8 205 52.2
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 2.5e-50 203.4 294 45.2
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 3.2e-50 203.0 277 46.6
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 4.2e-50 202.6 300 39.7
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 9.4e-50 201.4 191 57.6
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 9.4e-50 201.4 210 51.9
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 1.6e-49 200.7 205 49.8
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.1e-49 200.3 188 56.4
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 4.7e-49 199.1 291 43.0
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 4.7e-49 199.1 173 58.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 8.0e-49 198.4 205 49.8
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 8.0e-49 198.4 304 43.4
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 1.4e-48 197.6 307 40.1
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.8e-48 197.2 210 49.5
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 5.2e-48 195.7 213 46.9
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 6.8e-48 195.3 170 57.6
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 6.8e-48 195.3 166 57.2
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 8.8e-48 194.9 205 48.3
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 8.8e-48 194.9 210 49.0
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 8.8e-48 194.9 166 58.4
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 1.2e-47 194.5 219 47.5
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 1.2e-47 194.5 220 46.8
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 5.7e-47 192.2 285 41.8
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 7.5e-47 191.8 308 40.3
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 9.8e-47 191.4 260 44.6
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 1.3e-46 191.0 168 57.7
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 4.8e-46 189.1 232 46.6
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 6.3e-46 188.7 170 57.1
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 1.4e-45 187.6 353 36.8
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 7.0e-45 185.3 173 59.5
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 4.5e-44 182.6 241 43.6
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 5.9e-44 182.2 209 48.3
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 1.2e-41 174.5 323 37.5
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 2.1e-41 173.7 346 35.5
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 1.4e-40 171.0 120 72.5
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.2e-39 167.9 250 41.2
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 4.3e-34 149.4 161 54.7
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 8.9e-32 141.7 141 50.4
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.5e-31 141.0 222 37.8
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 2.4e-29 133.7 199 43.7
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 1.2e-23 114.8 125 44.8
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 3.2e-21 106.7 166 34.3
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 6.0e-20 102.4 164 36.0
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 4.3e-18 96.3 88 52.3
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 4.9e-14 82.8 71 50.7
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 5.1e-11 72.8 180 29.4
Hma1.2p1_1094F.1_g256330 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 2.5e-10 70.5 178 32.0


User provided reference genes

Program Settings