Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 1.5e-59 232.6 115 100.0
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 3.8e-55 218.0 115 93.0
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 7.8e-53 210.3 116 89.7
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 1.0e-52 209.9 116 89.7
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 5.4e-46 187.6 115 81.7
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 7.1e-46 187.2 116 81.9
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 1.6e-45 186.0 115 79.1
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 4.6e-45 184.5 115 78.3
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.6e-45 184.5 115 78.3
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.6e-45 184.5 115 78.3
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 4.6e-45 184.5 115 78.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.3e-44 183.0 115 78.3
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.3e-44 182.2 113 78.8
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 2.3e-44 182.2 115 79.1
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 5.1e-44 181.0 115 77.4
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 5.1e-44 181.0 115 75.7
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.9e-43 179.1 115 76.5
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 2.5e-43 178.7 115 77.4
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 5.6e-43 177.6 115 77.4
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 7.3e-43 177.2 119 72.3
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 2.1e-42 175.6 115 79.1
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 4.8e-42 174.5 115 78.3
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 6.2e-42 174.1 118 75.4
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 2.4e-41 172.2 99 87.9
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 3.1e-41 171.8 115 75.7
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 3.1e-41 171.8 97 85.6
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 3.1e-41 171.8 115 73.9
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 3.1e-41 171.8 117 75.2
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 4.0e-41 171.4 104 82.7
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 4.0e-41 171.4 104 82.7
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 5.3e-41 171.0 104 81.7
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 6.9e-41 170.6 117 76.1
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 9.0e-41 170.2 117 72.6
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 9.0e-41 170.2 118 71.2
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 1.2e-40 169.9 116 77.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 1.5e-40 169.5 99 85.9
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 1.5e-40 169.5 116 71.6
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 4.5e-40 167.9 102 80.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 7.6e-40 167.2 99 82.8
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.3e-39 166.4 116 75.9
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 122 71.3
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.7e-39 166.0 122 71.3
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 1.7e-39 166.0 113 72.6
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.7e-39 166.0 102 81.4
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.7e-39 166.0 115 75.7
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 2.2e-39 165.6 117 70.1
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 2.9e-39 165.2 129 65.9
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 3.8e-39 164.9 96 81.2
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 3.8e-39 164.9 108 79.6
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 6.4e-39 164.1 98 81.6
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 6.4e-39 164.1 102 76.5
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 6.4e-39 164.1 126 68.3
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 6.4e-39 164.1 102 80.4
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 6.4e-39 164.1 102 80.4
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 1.1e-38 163.3 116 74.1
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.1e-38 163.3 107 72.9
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.4e-38 162.9 99 78.8
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.9e-38 162.5 116 74.1
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 2.4e-38 162.2 107 73.8
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 2.4e-38 162.2 102 79.4
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 3.2e-38 161.8 114 68.4
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 4.2e-38 161.4 96 79.2
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 7.1e-38 160.6 114 67.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 1.2e-37 159.8 114 67.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 1.2e-37 159.8 114 67.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 1.2e-37 159.8 114 67.5
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 1.2e-37 159.8 99 77.8
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 2.7e-37 158.7 101 76.2
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 4.6e-37 157.9 99 74.7
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.6e-37 157.9 115 66.1
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 6.0e-37 157.5 116 73.3
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 6.0e-37 157.5 113 68.1
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 7.9e-37 157.1 127 65.4
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 7.9e-37 157.1 101 77.2
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 2.3e-36 155.6 102 71.6
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 2.3e-36 155.6 100 74.0
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 3.0e-36 155.2 108 77.8
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 3.9e-36 154.8 124 66.1
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 5.1e-36 154.5 117 68.4
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 8.7e-36 153.7 118 69.5
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.9e-35 152.5 105 74.3
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 4.3e-35 151.4 117 66.7
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 5.6e-35 151.0 81 86.4
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 2.8e-34 148.7 117 65.0
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 4.0e-33 144.8 102 68.6
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 2.6e-32 142.1 81 79.0
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 6.5e-31 137.5 97 69.1
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 3.2e-30 135.2 95 64.2
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 1.9e-27 125.9 101 56.4
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 8.2e-26 120.6 93 55.9
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.8e-25 119.4 83 74.7
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 5.3e-25 117.9 85 68.2
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 9.0e-25 117.1 93 68.8
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 6.5e-23 110.9 97 52.6
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 1.4e-22 109.8 64 82.8
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.9e-22 109.4 90 60.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 6.1e-21 104.4 60 83.3
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 5.3e-17 91.3 77 50.6
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 6.1e-13 77.8 92 35.9
VMungo1383G1925 Vigna mungo HOM05D007622 ORTHO05D009409 1.8e-09 66.2 57 54.4
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.8e-07 58.5 55 50.9


User provided reference genes

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