Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 2.4e-66 255.4 128 100.0
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 1.1e-39 166.8 130 69.2
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.1e-22 109.4 119 50.4
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 9.7e-20 100.5 140 45.0
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 9.7e-20 100.5 129 48.1
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 1.7e-19 99.8 135 45.9
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 3.7e-19 98.6 129 47.3
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 8.2e-19 97.4 140 46.4
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 8.2e-19 97.4 113 51.3
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 1.1e-18 97.1 112 49.1
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 2.4e-18 95.9 114 51.8
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 4.1e-18 95.1 96 59.4
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 7.0e-18 94.4 128 46.9
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 9.1e-18 94.0 134 44.8
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 2.0e-17 92.8 127 44.1
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 3.5e-17 92.0 97 55.7
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 1.7e-16 89.7 115 51.3
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 1.7e-16 89.7 122 45.1
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 2.2e-16 89.4 112 49.1
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 2.9e-16 89.0 120 47.5
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 5.0e-16 88.2 119 47.1
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 6.5e-16 87.8 106 47.2
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 8.5e-16 87.4 91 57.1
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 1.5e-15 86.7 69 62.3
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 1.5e-15 86.7 114 47.4
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 1.5e-15 86.7 115 50.4
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 4.2e-15 85.1 69 65.2
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 7.2e-15 84.3 118 46.6
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 1.2e-14 83.6 74 60.8
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 2.7e-14 82.4 70 64.3
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 3.6e-14 82.0 108 50.0
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 1.0e-13 80.5 131 42.0
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 1.4e-13 80.1 114 45.6
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 2.3e-13 79.3 138 40.6
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 2.3e-13 79.3 125 44.8
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 6.8e-13 77.8 136 41.9
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 1.2e-12 77.0 84 53.6
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 2.0e-12 76.3 70 60.0
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 2.6e-12 75.9 66 57.6
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 4.4e-12 75.1 84 50.0
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 9.8e-12 73.9 126 41.3
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 2.8e-11 72.4 78 53.8
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 2.4e-10 69.3 70 50.0
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 5.4e-10 68.2 120 36.7
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 5.4e-10 68.2 87 42.5
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 5.4e-10 68.2 102 46.1
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 9.1e-10 67.4 78 53.8
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 1.2e-09 67.0 94 45.7
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 1.2e-09 67.0 108 45.4
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 1.6e-09 66.6 87 41.4
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 2.7e-09 65.9 97 41.2
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 2.7e-09 65.9 49 69.4
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 4.5e-09 65.1 68 57.4
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 5.9e-09 64.7 87 41.4
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 5.9e-09 64.7 87 41.4
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 7.7e-09 64.3 95 42.1
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 6.5e-08 61.2 94 42.6
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 6.5e-08 61.2 87 41.4
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 6.5e-08 61.2 86 39.5
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 6.5e-08 61.2 87 41.4
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 6.5e-08 61.2 86 39.5
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 1.1e-07 60.5 64 51.6
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.9e-07 59.7 68 48.5
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 3.2e-07 58.9 111 37.8
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 3.6e-06 55.5 80 38.8
Cpa.g.sc30.141 Carica papaya HOM05D008198 ORTHO05D010220 3.6e-06 55.5 98 40.8


User provided reference genes

Program Settings