Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017677 Sechium edule HOM05D005709 ORTHO05D006306 6.8e-179 630.6 320 100.0
ClCG10G007760 Citrullus lanatus HOM05D005709 ORTHO05D006306 5.7e-101 371.7 382 59.2
MELO3C016416.2 Cucumis melo HOM05D005709 ORTHO05D006306 1.4e-96 357.1 390 56.4
Sed0005807 Sechium edule HOM05D005709 ORTHO05D006306 1.0e-94 350.9 390 56.9
CsaV3_3G006890 Cucumis sativus L. HOM05D005709 ORTHO05D006306 1.4e-86 323.9 382 53.7
RcHm_v2.0_Chr2g0111161 Rosa chinensis HOM05D005709 ORTHO05D006306 9.4e-64 248.1 390 44.9
Ciclev10025155m.g Citrus clementina HOM05D005709 ORTHO05D006306 3.6e-63 246.1 382 44.0
Haze_03880 Corylus avellana HOM05D005709 ORTHO05D006306 3.0e-62 243.0 384 44.0
FAN28G2327 Fragaria x ananassa HOM05D005709 ORTHO05D006306 3.0e-62 243.0 383 44.9
MD03G1143200 Malus domestica HOM05D005709 ORTHO05D006306 5.2e-62 242.3 377 45.1
FvH4_1g19610 Fragaria vesca HOM05D005709 ORTHO05D006306 8.8e-62 241.5 384 45.1
FAN19G1851 Fragaria x ananassa HOM05D005709 ORTHO05D006306 8.8e-62 241.5 384 45.1
MD11G1164000 Malus domestica HOM05D005709 ORTHO05D006306 2.0e-61 240.4 378 44.2
TWI74G1439 Tripterygium wilfordii HOM05D005709 ORTHO05D006306 2.6e-61 240.0 378 43.4
Cfa006877 Carpinus fangiana HOM05D005709 ORTHO05D006306 9.8e-61 238.0 382 42.7
Potri.006G134400 Populus trichocarpa HOM05D005709 ORTHO05D006306 8.3e-60 235.0 386 42.7
Eucgr.H04723 Eucalyptus grandis HOM05D005709 ORTHO05D006306 1.1e-59 234.6 374 42.8
QL06p035832 Quercus lobata HOM05D005709 ORTHO05D006306 2.4e-59 233.4 382 42.1
Prupe.6G202100 Prunus persica HOM05D005709 ORTHO05D006306 3.1e-59 233.0 379 43.3
Cc07_g14050 Coffea canephora HOM05D005709 ORTHO05D006306 2.0e-58 230.3 383 42.8
FAN26G3468 Fragaria x ananassa HOM05D005709 ORTHO05D006306 2.7e-58 229.9 383 44.1
CiPaw.07G047300 Carya illinoinensis HOM05D005709 ORTHO05D006306 8.6e-57 224.9 381 40.9
Lju188A3T31 Lonicera japonica HOM05D005709 ORTHO05D006306 1.1e-56 224.6 387 43.4
Nitab4.5_0013799g0010 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.1e-56 224.6 381 44.1
Cpa.g.sc55.19 Carica papaya HOM05D005709 ORTHO05D006306 4.2e-56 222.6 383 41.5
Actinidia28821 Actinidia chinensis HOM05D005709 ORTHO05D006306 5.5e-56 222.2 395 41.0
Thecc.01G090000 Theobroma cacao HOM05D005709 ORTHO05D006306 5.5e-56 222.2 380 42.6
CSS0001510 Camellia sinensis var. sinensis HOM05D005709 ORTHO05D006306 9.5e-56 221.5 396 41.4
PGSC0003DMG400016130 Solanum tuberosum HOM05D005709 ORTHO05D006306 1.2e-55 221.1 385 43.4
Atru.chr3.1240 Acer truncatum HOM05D005709 ORTHO05D006306 6.1e-55 218.8 382 41.6
vmacro18555 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 6.1e-55 218.8 392 40.6
vmacro18553 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.8e-54 217.2 392 40.6
Rhsim08G0016800 Rhododendron simsii HOM05D005709 ORTHO05D006306 2.3e-54 216.9 376 41.8
CANSAT01G1032 Cannabis sativa HOM05D005709 ORTHO05D006306 3.0e-54 216.5 385 41.8
Manes.12G125900 Manihot esculenta HOM05D005709 ORTHO05D006306 1.5e-53 214.2 384 41.4
Nn3g18597 Nelumbo nucifera HOM05D005709 ORTHO05D006306 1.5e-53 214.2 379 40.9
Sopen11g005470 Solanum pennellii HOM05D005709 ORTHO05D006306 1.5e-53 214.2 386 43.0
Sabra06G0105500 Salix brachista HOM05D005709 ORTHO05D006306 5.7e-53 212.2 402 39.1
TAR625G0141 Trochodendron aralioides HOM05D005709 ORTHO05D006306 1.3e-52 211.1 386 41.2
Duzib187G1076 Durio zibethinus HOM05D005709 ORTHO05D006306 1.7e-52 210.7 381 41.5
Glyma.01G022800 Glycine max HOM05D005709 ORTHO05D006306 2.8e-52 209.9 383 41.3
Medtr5g032050 Medicago truncatula HOM05D005709 ORTHO05D006306 4.9e-52 209.1 381 41.5
Ca_22702_v3 Cicer arietinum L. HOM05D005709 ORTHO05D006306 6.3e-52 208.8 379 42.0
Solyc11g010660.2 Solanum lycopersicum HOM05D005709 ORTHO05D006306 8.3e-52 208.4 388 42.5
Glyma.09G199500 Glycine max HOM05D005709 ORTHO05D006306 3.1e-51 206.5 383 42.0
COL.COLO4_27357 Corchorus olitorius HOM05D005709 ORTHO05D006306 5.4e-51 205.7 396 40.4
Peaxi162Scf00474g00732 Petunia axillaris HOM05D005709 ORTHO05D006306 7.0e-51 205.3 396 40.7
DCAR_010090 Daucus carota HOM05D005709 ORTHO05D006306 1.6e-50 204.1 381 40.2
ECA238G0695 Erigeron canadensis HOM05D005709 ORTHO05D006306 1.6e-50 204.1 380 38.9
VMungo1215G1966 Vigna mungo HOM05D005709 ORTHO05D006306 4.5e-50 202.6 375 40.8
MBI16_g12470_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 5.9e-50 202.2 414 39.6
SGA_v2.0_scaffold115G32123 Striga asiatica HOM05D005709 ORTHO05D006306 2.9e-49 199.9 392 39.8
CAN.G1344.19 Capsicum annuum HOM05D005709 ORTHO05D006306 8.6e-49 198.4 378 41.3
AUR62003667 Chenopodium quinoa HOM05D005709 ORTHO05D006306 8.6e-49 198.4 367 40.1
PGR102G2444 Punica granatum HOM05D005709 ORTHO05D006306 8.6e-49 198.4 395 39.0
Ah.02g123530 Amaranthus hybridus HOM05D005709 ORTHO05D006306 1.1e-48 198.0 380 38.7
arahy.Tifrunner.gnm1.ann1.7T2SE7 Arachis hypogaea HOM05D005709 ORTHO05D006306 1.1e-48 198.0 382 40.1
arahy.Tifrunner.gnm1.ann1.IH5V0S Arachis hypogaea HOM05D005709 ORTHO05D006306 1.1e-48 198.0 382 40.1
Nitab4.5_0007624g0020 Nicotiana tabacum HOM05D005709 ORTHO05D006306 1.1e-48 198.0 426 38.3
Aqoxy5G01380 Aquilegia oxysepala HOM05D005709 ORTHO05D006306 2.5e-48 196.8 381 40.4
EL10Ac6g15201 Beta vulgaris HOM05D005709 ORTHO05D006306 2.5e-48 196.8 384 39.6
Thhalv10003796m.g Eutrema salsugineum HOM05D005709 ORTHO05D006306 3.3e-48 196.4 381 39.4
AUR62017977 Chenopodium quinoa HOM05D005709 ORTHO05D006306 4.3e-48 196.1 372 40.1
Lj2g0012290 Lotus japonicus HOM05D005709 ORTHO05D006306 5.6e-48 195.7 384 40.1
PSO170G3043 Papaver somniferum HOM05D005709 ORTHO05D006306 5.6e-48 195.7 384 39.3
Migut.K00802 Erythranthe guttata HOM05D005709 ORTHO05D006306 1.6e-47 194.1 380 39.7
Lalb_Chr09g0325971 Lupinus albus HOM05D005709 ORTHO05D006306 2.3e-46 190.3 384 40.6
Sp2g28570 Schrenkiella parvula HOM05D005709 ORTHO05D006306 4.0e-46 189.5 382 38.5
Hund16527 Selenicereus undatus HOM05D005709 ORTHO05D006306 2.0e-45 187.2 383 38.6
Gorai.003G037400 Gossypium raimondii HOM05D005709 ORTHO05D006306 4.4e-45 186.0 381 37.8
Gohir.D03G035800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 9.8e-45 184.9 394 37.3
vmacro21792 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 1.3e-44 184.5 381 37.3
HanXRQChr14g0442981 Helianthus annuus HOM05D005709 ORTHO05D006306 4.9e-44 182.6 373 37.8
PSO675G1794 Papaver somniferum HOM05D005709 ORTHO05D006306 4.9e-44 182.6 381 37.8
Gohir.A02G144800 Gossypium hirsutum HOM05D005709 ORTHO05D006306 6.4e-44 182.2 379 37.5
Psat2g082080 Pisum sativum HOM05D005709 ORTHO05D006306 6.4e-44 182.2 381 38.3
GSVIVG01007131001 Vitis vinifera HOM05D005709 ORTHO05D006306 6.4e-44 182.2 273 42.5
THA.LOC104809180 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 8.3e-44 181.8 362 39.8
CARHR279470 Cardamine hirsuta HOM05D005709 ORTHO05D006306 1.4e-43 181.0 382 38.2
BolC3t18312H Brassica oleracea HOM05D005709 ORTHO05D006306 1.2e-42 177.9 380 37.9
Carub.0008s2634 Capsella rubella HOM05D005709 ORTHO05D006306 2.7e-42 176.8 381 36.7
AL8G43070 Arabidopsis lyrata HOM05D005709 ORTHO05D006306 4.6e-42 176.0 398 36.4
AT5G65490 Arabidopsis thaliana HOM05D005709 ORTHO05D006306 3.9e-41 172.9 385 37.1
Aa31LG1G16510 Aethionema arabicum HOM05D005709 ORTHO05D006306 5.6e-40 169.1 394 35.3
BraA06t26158Z Brassica rapa HOM05D005709 ORTHO05D006306 5.6e-40 169.1 369 37.7
TAR381G1594 Trochodendron aralioides HOM05D005709 ORTHO05D006306 9.5e-40 168.3 336 39.9
A06p32320 Brassica napus HOM05D005709 ORTHO05D006306 1.6e-39 167.5 367 37.6
ATR0763G252 Amborella trichopoda HOM05D005709 ORTHO05D006306 3.6e-39 166.4 404 34.7
PSO017G1508 Papaver somniferum HOM05D005709 ORTHO05D006306 3.1e-38 163.3 384 35.4
C03p60550 Brassica napus HOM05D005709 ORTHO05D006306 5.2e-38 162.5 378 36.5
HPP92_015350 Vanilla planifolia HOM05D005709 ORTHO05D006306 6.8e-38 162.2 382 36.4
Os08g0447200 Oryza sativa ssp. japonica HOM05D005709 ORTHO05D006306 1.5e-37 161.0 383 37.3
Lsat_1_v5_gn_2_70300 Lactuca sativa HOM05D005709 ORTHO05D006306 2.6e-37 160.2 264 39.4
SHI21884 Sapria himalayana HOM05D005709 ORTHO05D006306 5.8e-37 159.1 385 34.8
Sc03g0000380 Simmondsia chinensis HOM05D005709 ORTHO05D006306 5.8e-37 159.1 266 41.0
unitig_32.g11802 Utricularia gibba HOM05D005709 ORTHO05D006306 5.8e-37 159.1 407 33.9
vmacro21794 Vaccinium macrocarpon HOM05D005709 ORTHO05D006306 5.8e-37 159.1 314 37.9
Zm00001eb040880 Zea mays HOM05D005709 ORTHO05D006306 1.1e-35 154.8 378 34.7
Phvul.002G146800 Phaseolus vulgaris HOM05D005709 ORTHO05D006306 5.4e-35 152.5 312 38.8
Medtr4g125890 Medicago truncatula HOM05D005709 ORTHO05D006306 1.6e-34 151.0 301 38.5
Dinv13597 Davidia involucrata HOM05D005709 ORTHO05D006306 3.0e-33 146.7 245 42.4
Oeu002141.1 Olea europaea HOM05D005709 ORTHO05D006306 7.3e-32 142.1 244 43.9
SEGI_11890 Sequoiadendron giganteum HOM05D005709 ORTHO05D006306 1.2e-31 141.4 407 31.9
MBI16_g19593_MAGBIO Magnolia biondii HOM05D005709 ORTHO05D006306 1.6e-31 141.0 258 42.2
Nitab4.5_0001235g0070 Nicotiana tabacum HOM05D005280 ORTHO05D006253 1.1e-27 128.3 270 37.8
Nitab4.5_0000294g0080 Nicotiana tabacum HOM05D005280 ORTHO05D006253 7.3e-24 115.5 192 40.6
BcaC01g02778 Brassica carinata HOM05D005709 ORTHO05D006306 1.8e-22 110.9 173 41.0
TPR.G36731 Trifolium pratense HOM05D005709 ORTHO05D006306 1.2e-21 108.2 242 39.7
SMO137G0394 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 1.7e-20 104.4 371 28.8
HPP92_015330 Vanilla planifolia HOM05D005709 ORTHO05D006306 4.9e-20 102.8 294 33.0
Dinv13596 Davidia involucrata HOM05D005709 ORTHO05D006306 1.9e-19 100.9 99 54.5
Oeu031122.1 Olea europaea HOM05D005709 ORTHO05D006306 3.5e-18 96.7 179 37.4
THA.LOC104821549 Tarenaya hassleriana HOM05D005709 ORTHO05D006306 3.0e-17 93.6 138 43.5
SMO137G0085 Selaginella moellendorffii HOM05D005709 ORTHO05D006306 2.4e-14 84.0 322 26.7
Mapoly0135s0033 Marchantia polymorpha HOM05D005709 ORTHO05D006306 5.2e-14 82.8 441 26.1
Pp3c1_9650 Physcomitrium patens HOM05D005709 ORTHO05D006306 5.2e-14 82.8 424 26.2
PSO210G2291 Papaver somniferum HOM05D005709 ORTHO05D006306 2.5e-08 63.9 276 31.2
TPR.G36816 Trifolium pratense HOM05D005709 ORTHO05D006306 2.8e-07 60.5 66 53.0


User provided reference genes

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