Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 3.9e-156 554.7 267 100.0
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 8.0e-125 450.7 271 81.2
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 1.4e-124 449.9 269 80.7
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 9.1e-121 437.2 287 75.6
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.7e-88 329.3 256 63.3
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 1.1e-86 323.9 269 61.7
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.2e-85 320.5 260 61.5
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 2.4e-81 306.2 255 58.8
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 7.1e-81 304.7 267 56.6
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 7.1e-81 304.7 267 56.6
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 3.5e-80 302.4 264 57.2
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 3.5e-80 302.4 256 59.8
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 7.8e-80 301.2 256 59.0
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 1.7e-79 300.1 256 56.6
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 5.1e-79 298.5 263 56.7
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 8.7e-79 297.7 267 56.9
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 1.5e-78 297.0 256 56.6
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.9e-78 296.6 255 59.2
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 2.4e-76 289.7 272 54.0
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 1.2e-75 287.3 258 57.0
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.5e-75 287.0 267 55.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 2.2e-74 283.1 259 57.1
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 2.9e-74 282.7 263 56.3
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 3.8e-74 282.3 253 54.9
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 4.2e-73 278.9 387 42.9
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 6.0e-72 275.0 256 56.2
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.3e-71 273.1 263 51.3
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 5.1e-71 271.9 262 54.2
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 1.1e-70 270.8 266 54.1
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.5e-70 270.4 254 52.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 2.5e-70 269.6 256 55.1
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 4.3e-70 268.9 254 53.5
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.6e-70 268.5 254 52.4
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.3e-69 267.3 254 51.6
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.3e-69 267.3 259 52.1
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 2.1e-69 266.5 243 56.0
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 2.4e-68 263.1 255 53.3
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 5.3e-68 261.9 254 51.2
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.3e-66 257.3 255 54.1
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 3.8e-66 255.8 266 51.9
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 1.1e-65 254.2 264 51.9
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.4e-65 253.8 271 50.6
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.4e-65 253.8 263 52.5
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.9e-65 253.4 326 42.9
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 1.9e-65 253.4 259 51.7
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 2.4e-65 253.1 256 49.6
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 3.2e-65 252.7 278 50.7
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 7.1e-65 251.5 264 51.5
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 7.1e-65 251.5 270 50.0
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 1.6e-64 250.4 257 52.1
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 2.1e-64 250.0 261 50.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.7e-64 249.6 238 54.2
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 4.6e-64 248.8 270 51.5
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 4.6e-64 248.8 268 48.5
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.0e-63 247.7 254 50.8
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 1.8e-63 246.9 255 51.0
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 5.6e-62 241.9 257 51.4
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 7.4e-62 241.5 267 49.4
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 9.6e-62 241.1 199 59.8
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.6e-61 240.4 255 50.2
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 2.1e-61 240.0 255 50.2
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 2.1e-61 240.0 255 50.2
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 2.1e-61 240.0 255 50.2
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 1.8e-60 236.9 265 49.1
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 5.3e-60 235.3 255 49.4
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 1.5e-59 233.8 263 47.1
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 2.6e-59 233.0 189 61.4
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 4.5e-59 232.3 240 51.2
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.7e-58 230.3 226 54.0
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.6e-56 223.8 280 45.4
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 2.1e-56 223.4 254 50.4
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 4.6e-56 222.2 223 51.1
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.0e-55 221.1 201 57.7
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 3.0e-55 219.5 260 44.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 6.7e-55 218.4 253 43.9
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.9e-54 216.9 266 46.2
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 7.4e-54 214.9 339 41.9
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 4.1e-52 209.1 166 62.0
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.0e-51 206.8 245 46.1
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.0e-50 204.5 256 43.8
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 1.7e-50 203.8 179 57.5
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 2.5e-49 199.9 256 40.2
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.7e-48 196.4 243 48.1
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 3.5e-48 196.1 239 44.8
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.3e-47 193.4 267 42.3
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 3.0e-47 193.0 243 47.7
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 5.7e-46 188.7 276 44.6
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 1.6e-45 187.2 260 41.9
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.0e-43 180.3 141 58.9
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 4.5e-43 179.1 204 48.5
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 5.7e-38 162.2 241 41.1
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.5e-30 137.5 261 34.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 4.1e-28 129.4 148 50.7
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 7.0e-28 128.6 164 47.6
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 4.2e-25 119.4 246 34.1
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 3.6e-24 116.3 185 39.5
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 8.8e-23 111.7 204 31.9
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 2.0e-22 110.5 203 37.9
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.6e-19 100.9 274 29.2
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 3.5e-19 99.8 170 37.1
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 5.9e-19 99.0 135 42.2
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 1.2e-16 91.3 249 28.1
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 3.1e-12 76.6 133 34.6
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 3.6e-08 63.2 77 41.6
TPR.G6328 Trifolium pratense HOM05D000001 ORTHO05D009753 5.2e-07 59.3 44 63.6


User provided reference genes

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