Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017646 Sechium edule HOM05D005411 ORTHO05D006463 1.0e-79 300.1 159 100.0
CsaV3_4G005950 Cucumis sativus L. HOM05D005411 ORTHO05D006463 1.0e-55 220.3 160 76.2
ClCG07G008090 Citrullus lanatus HOM05D005411 ORTHO05D006463 5.2e-55 218.0 159 76.7
Manes.02G019300 Manihot esculenta HOM05D005411 ORTHO05D006463 4.0e-47 191.8 141 72.3
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 8.9e-47 190.7 158 66.5
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 1.2e-46 190.3 153 67.3
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 1.5e-46 189.9 151 66.9
RcHm_v2.0_Chr7g0197541 Rosa chinensis HOM05D005411 ORTHO05D006463 2.6e-46 189.1 158 65.2
MELO3C016353.2 Cucumis melo HOM05D005411 ORTHO05D006463 2.2e-45 186.0 138 76.8
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 4.9e-45 184.9 137 71.5
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 1.7e-42 176.4 159 62.3
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 6.6e-42 174.5 113 78.8
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 2.5e-41 172.6 159 60.4
CANSAT78G0141 Cannabis sativa HOM05D005411 ORTHO05D006463 4.3e-41 171.8 118 72.0
Gorai.003G158500 Gossypium raimondii HOM05D005411 ORTHO05D006463 5.6e-41 171.4 149 61.7
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 9.5e-41 170.6 142 64.8
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 1.6e-40 169.9 148 62.8
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 2.1e-40 169.5 122 72.1
TWI60G1258 Tripterygium wilfordii HOM05D005411 ORTHO05D006463 2.1e-40 169.5 149 58.4
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 6.2e-40 167.9 122 71.3
Gohir.A03G016600 Gossypium hirsutum HOM05D005411 ORTHO05D006463 1.4e-39 166.8 145 61.4
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 1.8e-39 166.4 149 60.4
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 3.1e-39 165.6 110 78.2
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 4.0e-39 165.2 153 60.1
Cc08_g14780 Coffea canephora HOM05D005411 ORTHO05D006463 6.8e-39 164.5 123 70.7
PSO478G4730 Papaver somniferum HOM05D005411 ORTHO05D006463 6.8e-39 164.5 151 59.6
PSO782G3895 Papaver somniferum HOM05D005411 ORTHO05D006463 6.8e-39 164.5 151 59.6
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 8.9e-39 164.1 147 62.6
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 1.5e-38 163.3 112 75.0
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 1.5e-38 163.3 146 61.0
CiPaw.12G092800 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.0e-38 162.9 141 62.4
MBI18_g42863_MAGBIO Magnolia biondii HOM05D005411 ORTHO05D006463 2.0e-38 162.9 111 73.9
Nitab4.5_0001615g0100 Nicotiana tabacum HOM05D005411 ORTHO05D006463 2.0e-38 162.9 121 67.8
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 2.6e-38 162.5 162 59.3
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 5.8e-38 161.4 162 58.0
FAN04G3034 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.5e-38 161.0 136 66.2
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 9.8e-38 160.6 123 65.0
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 9.8e-38 160.6 119 68.1
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 9.8e-38 160.6 119 68.1
PGSC0003DMG403012339 Solanum tuberosum HOM05D005411 ORTHO05D006463 9.8e-38 160.6 119 68.1
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.7e-37 159.8 136 66.2
Nitab4.5_0013184g0010 Nicotiana tabacum HOM05D005411 ORTHO05D006463 1.7e-37 159.8 151 58.3
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 2.9e-37 159.1 113 71.7
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.7e-37 158.7 157 56.7
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 4.9e-37 158.3 112 75.0
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 4.9e-37 158.3 152 58.6
CAN.G774.50 Capsicum annuum HOM05D005411 ORTHO05D006463 1.1e-36 157.1 133 62.4
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.4e-36 154.8 115 67.8
ECA233G5385 Erigeron canadensis HOM05D005411 ORTHO05D006463 7.1e-36 154.5 119 66.4
Migut.A00759 Erythranthe guttata HOM05D005411 ORTHO05D006463 7.1e-36 154.5 121 64.5
FAN08G0497 Fragaria x ananassa HOM05D005411 ORTHO05D006463 7.1e-36 154.5 136 64.7
Psat7g033000 Pisum sativum HOM05D005411 ORTHO05D006463 7.1e-36 154.5 109 72.5
Medtr8g098255 Medicago truncatula HOM05D005411 ORTHO05D006463 9.2e-36 154.1 109 72.5
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 2.1e-35 152.9 115 69.6
Ca_17530_v3 Cicer arietinum L. HOM05D005411 ORTHO05D006463 2.1e-35 152.9 108 72.2
TPR.G12871 Trifolium pratense HOM05D005411 ORTHO05D006463 4.6e-35 151.8 106 72.6
Thhalv10026496m.g Eutrema salsugineum HOM05D005411 ORTHO05D006463 2.3e-34 149.4 114 68.4
THA.LOC104814574 Tarenaya hassleriana HOM05D005411 ORTHO05D006463 3.0e-34 149.1 124 65.3
Carub.0007s1784 Capsella rubella HOM05D005411 ORTHO05D006463 3.9e-34 148.7 119 68.1
AL7G30140 Arabidopsis lyrata HOM05D005411 ORTHO05D006463 6.6e-34 147.9 119 66.4
Lj4g0004308 Lotus japonicus HOM05D005411 ORTHO05D006463 6.6e-34 147.9 134 60.4
CARHR230670 Cardamine hirsuta HOM05D005411 ORTHO05D006463 8.6e-34 147.5 119 64.7
A01p14570 Brassica napus HOM05D005411 ORTHO05D006463 1.1e-33 147.1 119 66.4
BraA01t01399Z Brassica rapa HOM05D005411 ORTHO05D006463 1.1e-33 147.1 119 66.4
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.5e-33 146.7 160 54.4
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.5e-33 146.7 160 54.4
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 4.3e-33 145.2 173 49.1
AT4G23330 Arabidopsis thaliana HOM05D005411 ORTHO05D006463 5.6e-33 144.8 150 55.3
MSTRG.25610 Avicennia marina HOM05D005411 ORTHO05D006463 5.6e-33 144.8 109 65.1
A03p54210 Brassica napus HOM05D005411 ORTHO05D006463 5.6e-33 144.8 119 66.4
BcaC09g51012 Brassica carinata HOM05D005411 ORTHO05D006463 7.3e-33 144.4 148 56.1
BolC1t01733H Brassica oleracea HOM05D005411 ORTHO05D006463 7.3e-33 144.4 148 56.1
unitig_46.g18551 Utricularia gibba HOM05D005411 ORTHO05D006463 9.5e-33 144.1 136 58.8
BraA03t14482Z Brassica rapa HOM05D000022 ORTHO05D000071 1.2e-32 143.7 113 66.4
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 1.2e-32 143.7 91 80.2
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 1.2e-32 143.7 125 63.2
Lj8E221T1 Lonicera japonica HOM05D005411 ORTHO05D006463 2.1e-32 142.9 103 69.9
BcaNung03266 Brassica carinata HOM05D005411 ORTHO05D006463 2.8e-32 142.5 131 58.0
BcaNung01456 Brassica carinata HOM05D005411 ORTHO05D006463 4.7e-32 141.7 113 65.5
SalBow4G3209 Salvia bowleyana HOM05D005411 ORTHO05D006463 4.7e-32 141.7 116 62.1
ATR0680G335 Amborella trichopoda HOM05D005411 ORTHO05D006463 6.2e-32 141.4 105 67.6
BcaC03g18356 Brassica carinata HOM05D005411 ORTHO05D006463 6.2e-32 141.4 114 64.9
C02p64340 Brassica napus HOM05D005411 ORTHO05D006463 6.2e-32 141.4 114 64.9
C07p52580 Brassica napus HOM05D000022 ORTHO05D000071 1.1e-31 140.6 147 55.1
BolC7t45755H Brassica oleracea HOM05D005411 ORTHO05D006463 1.1e-31 140.6 147 55.1
Thecc.03G279100 Theobroma cacao HOM05D005411 ORTHO05D006463 6.8e-31 137.9 113 66.4
arahy.Tifrunner.gnm1.ann1.FJ1DNZ Arachis hypogaea HOM05D005411 ORTHO05D006463 3.7e-29 132.1 127 60.6
arahy.Tifrunner.gnm1.ann1.P2DUDW Arachis hypogaea HOM05D005411 ORTHO05D006463 3.7e-29 132.1 127 60.6
AUR62022799 Chenopodium quinoa HOM05D005411 ORTHO05D006463 3.7e-29 132.1 101 62.4
Aqoxy7G00317 Aquilegia oxysepala HOM05D005411 ORTHO05D006463 4.9e-29 131.7 100 65.0
Glyma.05G208200 Glycine max HOM05D005411 ORTHO05D006463 4.9e-29 131.7 137 55.5
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 4.9e-29 131.7 96 72.9
Sabra01G0078400 Salix brachista HOM05D005411 ORTHO05D006463 6.4e-29 131.3 109 64.2
CDE11G0686 Ceratophyllum demersum HOM05D003133 ORTHO05D006463 8.4e-29 131.0 101 64.4
SEGI_09083 Sequoiadendron giganteum HOM05D005411 ORTHO05D006463 8.4e-29 131.0 104 65.4
Os07g0483400 Oryza sativa ssp. japonica HOM05D005411 ORTHO05D006463 2.4e-28 129.4 109 56.9
SGA_v2.0_scaffold173G39183 Striga asiatica HOM05D005411 ORTHO05D006463 4.1e-28 128.6 136 51.5
Hund16039 Selenicereus undatus HOM05D005411 ORTHO05D006463 7.1e-28 127.9 116 61.2
VMungo0251G3187 Vigna mungo HOM05D005411 ORTHO05D006463 1.0e-26 124.0 90 71.1
Aa31LG9G10800 Aethionema arabicum HOM05D005411 ORTHO05D006463 2.3e-26 122.9 121 55.4
Duzib205G1808 Durio zibethinus HOM05D005411 ORTHO05D006463 1.9e-25 119.8 123 56.1
Gohir.D03G151300 Gossypium hirsutum HOM05D005411 ORTHO05D006463 3.6e-24 115.5 112 56.2
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 1.4e-23 113.6 143 45.5
CDE09G0994 Ceratophyllum demersum HOM05D005411 ORTHO05D006463 1.8e-23 113.2 113 54.9
Pp3c11_2200 Physcomitrium patens HOM05D005411 ORTHO05D006463 7.6e-22 107.8 100 54.0
BolC5t34770H Brassica oleracea HOM05D005411 ORTHO05D006463 3.8e-21 105.5 94 62.8
BcaNung00981 Brassica carinata HOM05D005411 ORTHO05D006463 6.4e-21 104.8 131 50.4
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 1.1e-20 104.0 87 58.6
Zm00001eb104990 Zea mays HOM05D005411 ORTHO05D006463 2.4e-20 102.8 83 60.2
Sc01g0009600 Simmondsia chinensis HOM05D005411 ORTHO05D006463 3.2e-20 102.4 90 57.8
BcaNung00977 Brassica carinata HOM05D005411 ORTHO05D006463 1.0e-18 97.4 68 70.6
C01p18020 Brassica napus HOM05D005411 ORTHO05D006463 2.3e-18 96.3 111 51.4
Mapoly0008s0209 Marchantia polymorpha HOM05D005411 ORTHO05D006463 3.0e-18 95.9 100 45.0
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 3.9e-18 95.5 67 67.2
SHI07138 Sapria himalayana HOM05D005411 ORTHO05D006463 1.6e-16 90.1 67 65.7
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 3.6e-16 89.0 71 64.8
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 6.2e-16 88.2 98 53.1
Duzib084G0828 Durio zibethinus HOM05D005411 ORTHO05D006463 1.1e-15 87.4 103 48.5
AagrBONN_evm.TU.Sc2ySwM_369.479 Anthoceros agrestis HOM05D005411 ORTHO05D006463 1.4e-15 87.0 96 47.9
Oeu047371.1 Olea europaea HOM05D005411 ORTHO05D006463 1.4e-15 87.0 76 61.8
Potri.003G127900 Populus trichocarpa HOM05D005411 ORTHO05D006463 4.0e-15 85.5 127 43.3
BcaC01g04135 Brassica carinata HOM05D005411 ORTHO05D006463 7.9e-11 71.2 56 62.5
SMO329G0027 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.0e-10 70.9 73 49.3
SMO358G0504 Selaginella moellendorffii HOM05D005411 ORTHO05D006463 1.0e-10 70.9 73 49.3
BolC3t16740H Brassica oleracea HOM05D005411 ORTHO05D006463 3.3e-09 65.9 68 57.4
C03p44770 Brassica napus HOM05D005411 ORTHO05D006463 5.6e-09 65.1 68 57.4
Sabra17G0003100 Salix brachista HOM05D005411 ORTHO05D006463 2.1e-08 63.2 82 45.1
Sabra17G0003800 Salix brachista HOM05D005411 ORTHO05D006463 2.1e-08 63.2 82 45.1
HPP92_001497 Vanilla planifolia HOM05D005411 ORTHO05D006463 3.6e-08 62.4 43 69.8
Sabra18G0123000 Salix brachista HOM05D005411 ORTHO05D006463 8.1e-08 61.2 82 43.9
Sabra14G0123800 Salix brachista HOM05D005411 ORTHO05D006463 3.1e-07 59.3 82 42.7
BcaB05g22557 Brassica carinata HOM05D002513 ORTHO05D002720 9.0e-07 57.8 59 54.2
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 1.2e-06 57.4 63 54.0
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 1.5e-06 57.0 74 47.3
Sabra17G0034500 Salix brachista HOM05D005411 ORTHO05D006463 2.0e-06 56.6 111 38.7


User provided reference genes

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