Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017632 Sechium edule HOM05D003412 ORTHO05D003962 3.0e-111 405.6 274 100.0
ClCG02G014670 Citrullus lanatus HOM05D003412 ORTHO05D003962 3.7e-101 372.1 274 84.7
MELO3C004154.2 Cucumis melo HOM05D003412 ORTHO05D003962 2.1e-96 356.3 274 73.4
Sed0023403 Sechium edule HOM05D003412 ORTHO05D003962 2.3e-95 352.8 274 78.8
CsaV3_2G007300 Cucumis sativus L. HOM05D003412 ORTHO05D003962 8.8e-95 350.9 267 73.8
CiPaw.07G035400 Carya illinoinensis HOM05D003412 ORTHO05D003962 3.5e-83 312.4 274 65.0
Prupe.6G305600 Prunus persica HOM05D003412 ORTHO05D003962 1.0e-82 310.8 274 64.2
Sabra05G0015000 Salix brachista HOM05D003412 ORTHO05D003962 2.3e-82 309.7 274 73.7
Thecc.05G329000 Theobroma cacao HOM05D003412 ORTHO05D003962 3.0e-82 309.3 274 64.6
Haze_03996 Corylus avellana HOM05D003412 ORTHO05D003962 6.6e-82 308.1 274 69.7
Duzib128G1566 Durio zibethinus HOM05D003412 ORTHO05D003962 1.1e-81 307.4 274 64.2
Duzib177G0752 Durio zibethinus HOM05D003412 ORTHO05D003962 1.5e-81 307.0 274 63.9
CiPaw.08G150800 Carya illinoinensis HOM05D003412 ORTHO05D003962 2.5e-81 306.2 274 64.2
Sabra13G0002900 Salix brachista HOM05D003412 ORTHO05D003962 2.5e-81 306.2 274 63.9
GSVIVG01031318001 Vitis vinifera HOM05D003412 ORTHO05D003962 2.5e-81 306.2 274 64.6
Ciclev10012076m.g Citrus clementina HOM05D003412 ORTHO05D003962 3.3e-81 305.8 274 70.8
Sabra05G0000900 Salix brachista HOM05D003412 ORTHO05D003962 5.6e-81 305.1 274 75.9
VMungo0720G0630 Vigna mungo HOM05D003412 ORTHO05D003962 5.6e-81 305.1 274 62.4
Atru.chr12.1551 Acer truncatum HOM05D003412 ORTHO05D003962 9.5e-81 304.3 274 63.1
Glyma.10G144000 Glycine max HOM05D003412 ORTHO05D003962 1.2e-80 303.9 274 65.0
Eucgr.H01317 Eucalyptus grandis HOM05D003412 ORTHO05D003962 4.7e-80 302.0 275 62.5
COL.COLO4_05512 Corchorus olitorius HOM05D003412 ORTHO05D003962 8.0e-80 301.2 274 68.6
Hma1.2p1_3304F.1_g335080 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 1.1e-79 300.8 275 63.6
Cpa.g.sc48.220 Carica papaya HOM05D003412 ORTHO05D003962 1.8e-79 300.1 275 63.3
Phvul.007G204500 Phaseolus vulgaris HOM05D003412 ORTHO05D003962 1.8e-79 300.1 274 62.4
Cc02_g35780 Coffea canephora HOM05D003412 ORTHO05D003962 2.3e-79 299.7 274 67.9
Glyma.20G092900 Glycine max HOM05D003412 ORTHO05D003962 8.9e-79 297.7 274 70.4
MD04G1187100 Malus domestica HOM05D003412 ORTHO05D003962 8.9e-79 297.7 274 67.2
Lj5g0005042 Lotus japonicus HOM05D003412 ORTHO05D003962 2.6e-78 296.2 274 63.1
Actinidia16911 Actinidia chinensis HOM05D003412 ORTHO05D003962 4.4e-78 295.4 274 60.6
arahy.Tifrunner.gnm1.ann1.LCTE14 Arachis hypogaea HOM05D003412 ORTHO05D003962 1.7e-77 293.5 278 66.9
arahy.Tifrunner.gnm1.ann1.WSUD3I Arachis hypogaea HOM05D003412 ORTHO05D003962 2.2e-77 293.1 278 64.7
RcHm_v2.0_Chr3g0458381 Rosa chinensis HOM05D003412 ORTHO05D003962 2.2e-77 293.1 274 60.6
TPR.G2623 Trifolium pratense HOM05D003412 ORTHO05D003962 2.2e-77 293.1 274 59.9
FAN09G0161 Fragaria x ananassa HOM05D003412 ORTHO05D003962 6.4e-77 291.6 274 60.9
Gohir.D13G116700 Gossypium hirsutum HOM05D003412 ORTHO05D003962 5.4e-76 288.5 274 60.6
Gorai.013G131200 Gossypium raimondii HOM05D003412 ORTHO05D003962 5.4e-76 288.5 274 60.6
Hund07273 Selenicereus undatus HOM05D003412 ORTHO05D003962 9.2e-76 287.7 274 66.4
Lj5A319T47 Lonicera japonica HOM05D003412 ORTHO05D003962 1.2e-75 287.3 275 61.1
FvH4_6g08410 Fragaria vesca HOM05D003412 ORTHO05D003962 2.0e-75 286.6 274 66.4
FAN14G3569 Fragaria x ananassa HOM05D003412 ORTHO05D003962 2.0e-75 286.6 274 65.7
Nitab4.5_0001931g0010 Nicotiana tabacum HOM05D003412 ORTHO05D003962 2.0e-75 286.6 296 61.1
Peaxi162Scf00357g00017 Petunia axillaris HOM05D003412 ORTHO05D003962 2.0e-75 286.6 291 61.2
CAN.G1248.24 Capsicum annuum HOM05D003412 ORTHO05D003962 3.5e-75 285.8 274 59.1
Sc16g0009380 Simmondsia chinensis HOM05D003412 ORTHO05D003962 3.5e-75 285.8 274 58.8
PGSC0003DMG400018247 Solanum tuberosum HOM05D003412 ORTHO05D003962 4.6e-75 285.4 274 58.0
Rhsim05G0121800 Rhododendron simsii HOM05D003412 ORTHO05D003962 6.0e-75 285.0 274 64.2
Lalb_Chr06g0167331 Lupinus albus HOM05D003412 ORTHO05D003962 1.0e-74 284.3 274 57.7
Oeu036644.1 Olea europaea HOM05D003412 ORTHO05D003962 1.0e-74 284.3 274 58.8
Sopen01g044580 Solanum pennellii HOM05D003412 ORTHO05D003962 1.3e-74 283.9 274 58.0
MD12G1200500 Malus domestica HOM05D003412 ORTHO05D003962 1.7e-74 283.5 274 59.9
Gohir.A13G113600 Gossypium hirsutum HOM05D003412 ORTHO05D003962 3.0e-74 282.7 274 59.5
Hund07277 Selenicereus undatus HOM05D003412 ORTHO05D003962 3.9e-74 282.3 274 67.2
Nn3g21904 Nelumbo nucifera HOM05D003412 ORTHO05D003962 8.6e-74 281.2 274 63.1
Oeu000100.1 Olea europaea HOM05D003412 ORTHO05D003962 4.3e-73 278.9 274 59.1
Nn4g25397 Nelumbo nucifera HOM05D003412 ORTHO05D003962 5.6e-73 278.5 274 60.6
DCAR_025305 Daucus carota HOM05D003412 ORTHO05D003962 7.3e-73 278.1 274 59.1
CANSAT54G2189 Cannabis sativa HOM05D003412 ORTHO05D003962 9.5e-73 277.7 283 57.6
Nitab4.5_0014791g0020 Nicotiana tabacum HOM05D003412 ORTHO05D003962 9.5e-73 277.7 292 58.9
Hma1.2p1_0052F.1_g030415 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 1.2e-72 277.3 282 58.2
MSTRG.16423 Avicennia marina HOM05D003412 ORTHO05D003962 2.1e-72 276.6 274 56.6
ECA236G3082 Erigeron canadensis HOM05D003412 ORTHO05D003962 2.1e-72 276.6 275 66.9
Rhsim11G0101900 Rhododendron simsii HOM05D003412 ORTHO05D003962 4.7e-72 275.4 273 57.5
Solyc01g101130.3 Solanum lycopersicum HOM05D003412 ORTHO05D003962 1.1e-71 274.2 274 57.7
MSTRG.27914 Avicennia marina HOM05D003412 ORTHO05D003962 1.4e-71 273.9 274 58.4
vmacro01603 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 1.4e-71 273.9 274 56.9
AUR62006809 Chenopodium quinoa HOM05D003412 ORTHO05D003962 2.3e-71 273.1 274 63.9
PGR083G2508 Punica granatum HOM05D003412 ORTHO05D003962 3.1e-71 272.7 274 56.2
MSTRG.5167 Avicennia marina HOM05D003412 ORTHO05D003962 5.8e-70 268.5 273 57.5
Carub.0006s2442 Capsella rubella HOM05D003412 ORTHO05D003962 5.8e-70 268.5 274 55.1
Lsat_1_v5_gn_9_77100 Lactuca sativa HOM05D003412 ORTHO05D003962 3.7e-69 265.8 274 62.0
AUR62000468 Chenopodium quinoa HOM05D003412 ORTHO05D003962 8.3e-69 264.6 274 62.8
Aqoxy2G02528 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 1.1e-68 264.2 275 63.3
PSO210G2054 Papaver somniferum HOM05D003412 ORTHO05D003962 1.4e-68 263.8 274 54.7
PSO761G0645 Papaver somniferum HOM05D003412 ORTHO05D003962 2.4e-68 263.1 274 54.7
Actinidia01664 Actinidia chinensis HOM05D003412 ORTHO05D003962 5.4e-68 261.9 275 72.0
SalBow1G0001 Salvia bowleyana HOM05D003412 ORTHO05D003962 9.2e-68 261.2 273 54.9
THA.LOC104818749 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 1.2e-67 260.8 275 54.5
Eucgr.B01817 Eucalyptus grandis HOM05D003412 ORTHO05D003962 2.1e-67 260.0 274 53.6
EL10Ac4g09549 Beta vulgaris HOM05D003412 ORTHO05D003962 2.7e-67 259.6 274 54.4
AT5G26770 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 1.7e-66 256.9 297 58.2
BcaNung03675 Brassica carinata HOM05D003412 ORTHO05D003962 1.7e-66 256.9 274 63.1
Oeu061921.1 Olea europaea HOM05D003412 ORTHO05D003962 1.1e-65 254.2 274 55.5
Ah.06g190650 Amaranthus hybridus HOM05D003412 ORTHO05D003962 2.5e-65 253.1 261 55.2
Lju99C6G3 Lonicera japonica HOM05D003412 ORTHO05D003962 2.5e-65 253.1 254 57.9
GSVIVG01028212001 Vitis vinifera HOM05D003412 ORTHO05D003962 2.5e-65 253.1 274 54.0
Lalb_Chr21g0310081 Lupinus albus HOM05D003412 ORTHO05D003962 4.3e-65 252.3 274 58.0
A06p37010 Brassica napus HOM05D003412 ORTHO05D003962 2.8e-64 249.6 274 63.9
Dinv24506 Davidia involucrata HOM05D003412 ORTHO05D003962 2.8e-64 249.6 274 61.7
Ca_10195_v3 Cicer arietinum L. HOM05D003412 ORTHO05D003962 1.1e-63 247.7 274 67.9
FAN05G5683 Fragaria x ananassa HOM05D003412 ORTHO05D003962 1.1e-63 247.7 274 69.7
Aa31LG11G9870 Aethionema arabicum HOM05D003412 ORTHO05D003962 1.2e-62 244.2 274 51.5
Os05g0135900 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 4.4e-62 242.3 274 51.1
DCAR_029287 Daucus carota HOM05D003412 ORTHO05D003962 5.8e-62 241.9 275 54.5
Zm00001eb417390 Zea mays HOM05D003412 ORTHO05D003962 5.8e-62 241.9 276 51.8
Potri.005G003600 Populus trichocarpa HOM05D003412 ORTHO05D003962 2.2e-61 240.0 274 70.1
BraA06t26626Z Brassica rapa HOM05D003412 ORTHO05D003962 4.9e-61 238.8 291 60.1
SEGI_01307 Sequoiadendron giganteum HOM05D003412 ORTHO05D003962 6.4e-61 238.4 274 51.1
Psat6g155400 Pisum sativum HOM05D003412 ORTHO05D003962 1.4e-60 237.3 163 78.5
TWI56G0029 Tripterygium wilfordii HOM05D003412 ORTHO05D003962 2.4e-60 236.5 274 66.8
BcaNung03912 Brassica carinata HOM05D003412 ORTHO05D003962 3.2e-60 236.1 274 60.6
Medtr1g484830 Medicago truncatula HOM05D003412 ORTHO05D003962 5.4e-60 235.3 158 79.7
THA.LOC104816843 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 7.1e-60 235.0 274 58.0
HanXRQChr03g0088701 Helianthus annuus HOM05D003412 ORTHO05D003962 1.2e-59 234.2 215 61.4
QL03p010236 Quercus lobata HOM05D003412 ORTHO05D003962 1.6e-59 233.8 273 69.6
BolC9t53547H Brassica oleracea HOM05D003412 ORTHO05D003962 2.7e-59 233.0 281 60.9
SGA_v2.0_scaffold117G32404 Striga asiatica HOM05D003412 ORTHO05D003962 2.7e-59 233.0 275 50.5
arahy.Tifrunner.gnm1.ann1.36CNLM Arachis hypogaea HOM05D003412 ORTHO05D003962 4.6e-59 232.3 274 56.2
Hund21837 Selenicereus undatus HOM05D003412 ORTHO05D003962 4.6e-59 232.3 247 54.7
QL03p010471 Quercus lobata HOM05D003412 ORTHO05D003962 1.0e-58 231.1 273 69.2
Migut.B00877 Erythranthe guttata HOM05D003412 ORTHO05D003962 1.3e-58 230.7 274 50.0
vmacro19768 Vaccinium macrocarpon HOM05D003412 ORTHO05D003962 1.3e-58 230.7 274 56.2
THA.LOC104821745 Tarenaya hassleriana HOM05D003412 ORTHO05D003962 3.0e-58 229.6 326 44.2
Manes.08G107900 Manihot esculenta HOM05D003412 ORTHO05D003962 3.9e-58 229.2 159 76.7
arahy.Tifrunner.gnm1.ann1.D23GS1 Arachis hypogaea HOM05D003412 ORTHO05D003962 5.1e-58 228.8 274 55.8
Potri.013G003400 Populus trichocarpa HOM05D003412 ORTHO05D003962 1.9e-57 226.9 157 77.7
ATR0796G311 Amborella trichopoda HOM05D003412 ORTHO05D003962 3.3e-57 226.1 275 53.1
Lalb_Chr04g0260311 Lupinus albus HOM05D003412 ORTHO05D003962 3.3e-57 226.1 273 53.8
CARHR080290 Cardamine hirsuta HOM05D003412 ORTHO05D003962 4.3e-57 225.7 275 49.1
Thhalv10004552m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 9.6e-57 224.6 164 74.4
BcaC04g23636 Brassica carinata HOM05D003412 ORTHO05D003962 1.6e-56 223.8 274 55.5
C07p41480 Brassica napus HOM05D003412 ORTHO05D003962 3.6e-56 222.6 274 66.1
BolC7t44681H Brassica oleracea HOM05D003412 ORTHO05D003962 3.6e-56 222.6 274 66.1
CARHR186800 Cardamine hirsuta HOM05D003412 ORTHO05D003962 6.2e-56 221.9 274 66.1
Dinv30940 Davidia involucrata HOM05D003412 ORTHO05D003962 1.4e-55 220.7 157 78.3
CDE08G0751 Ceratophyllum demersum HOM05D003412 ORTHO05D003962 1.8e-55 220.3 274 46.4
Manes.09G180600 Manihot esculenta HOM05D003412 ORTHO05D003962 1.8e-55 220.3 158 76.6
Thhalv10008143m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 2.4e-55 219.9 274 47.8
AL6G38640 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 5.2e-55 218.8 274 66.1
MBI18_g09639_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 5.2e-55 218.8 274 50.7
TAR365G0256 Trochodendron aralioides HOM05D003412 ORTHO05D003962 5.2e-55 218.8 273 65.2
CARHR009430 Cardamine hirsuta HOM05D003412 ORTHO05D003962 4.4e-54 215.7 274 46.4
SGA_v2.0_scaffold279G46784 Striga asiatica HOM05D003412 ORTHO05D003962 4.4e-54 215.7 276 53.6
Sp2g21210 Schrenkiella parvula HOM05D003412 ORTHO05D003962 4.9e-53 212.2 159 73.0
unitig_22.g5801 Utricularia gibba HOM05D003412 ORTHO05D003962 1.4e-52 210.7 274 46.7
C09p06270 Brassica napus HOM05D003412 ORTHO05D003962 1.9e-52 210.3 159 71.1
A09p05660 Brassica napus HOM05D003412 ORTHO05D003962 5.4e-52 208.8 275 65.5
Carub.0001s0882 Capsella rubella HOM05D003412 ORTHO05D003962 1.6e-51 207.2 275 46.9
TAR362G0077 Trochodendron aralioides HOM05D003412 ORTHO05D003962 2.7e-51 206.5 274 48.5
Lj9C230G11 Lonicera japonica HOM05D003412 ORTHO05D003962 3.5e-51 206.1 254 49.6
PGR031G1608 Punica granatum HOM05D003412 ORTHO05D003962 3.5e-51 206.1 310 58.7
BraA09t36208Z Brassica rapa HOM05D003412 ORTHO05D003962 4.6e-51 205.7 285 55.8
Sp1g08080 Schrenkiella parvula HOM05D003412 ORTHO05D003962 4.6e-51 205.7 274 45.6
Migut.N00969 Erythranthe guttata HOM05D003412 ORTHO05D003962 1.0e-50 204.5 164 70.1
TAR365G0905 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.0e-50 204.5 208 57.2
MBI19_g32732_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 1.7e-50 203.8 268 47.4
Aa31LG1G5630 Aethionema arabicum HOM05D003412 ORTHO05D003962 2.3e-50 203.4 274 46.0
Hma1.2p1_3841F.1_g337660 Hydrangea macrophylla HOM05D003412 ORTHO05D003962 5.6e-49 198.7 242 65.7
HPP92_026058 Vanilla planifolia HOM05D003412 ORTHO05D003962 7.3e-49 198.4 274 47.4
BcaB04g19713 Brassica carinata HOM05D003412 ORTHO05D003962 1.3e-48 197.6 158 69.0
TAR636G2549 Trochodendron aralioides HOM05D003412 ORTHO05D003962 1.4e-47 194.1 274 55.8
Zm00001eb354610 Zea mays HOM05D003412 ORTHO05D003962 1.4e-47 194.1 219 51.6
AL3G16570 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 1.5e-46 190.7 164 65.2
Thhalv10021934m.g Eutrema salsugineum HOM05D003412 ORTHO05D003962 1.5e-46 190.7 160 66.9
Aa31LG5G16210 Aethionema arabicum HOM05D003412 ORTHO05D003962 2.6e-46 189.9 164 62.8
AL1G19990 Arabidopsis lyrata HOM05D003412 ORTHO05D003962 2.6e-46 189.9 216 51.9
Aqoxy5G02790 Aquilegia oxysepala HOM05D003412 ORTHO05D003962 3.4e-46 189.5 274 44.2
Sp3g04690 Schrenkiella parvula HOM05D003412 ORTHO05D003962 5.8e-46 188.7 163 63.2
AT3G05830 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 2.9e-45 186.4 164 64.6
C05p07470 Brassica napus HOM05D003412 ORTHO05D003962 1.4e-44 184.1 275 44.7
BolC5t29502H Brassica oleracea HOM05D003412 ORTHO05D003962 4.2e-44 182.6 275 49.1
BcaC05g30086 Brassica carinata HOM05D003412 ORTHO05D003962 1.6e-43 180.6 165 61.8
BraA06t23830Z Brassica rapa HOM05D003412 ORTHO05D003962 2.1e-43 180.3 275 46.2
C05p61450 Brassica napus HOM05D003412 ORTHO05D003962 2.7e-43 179.9 165 61.8
BraA05t22941Z Brassica rapa HOM05D003412 ORTHO05D003962 2.7e-43 179.9 172 60.5
A05p42230 Brassica napus HOM05D003412 ORTHO05D003962 3.5e-43 179.5 165 61.8
Carub.0003s0519 Capsella rubella HOM05D003412 ORTHO05D003962 6.0e-43 178.7 165 61.2
BolC5t34803H Brassica oleracea HOM05D003412 ORTHO05D003962 2.3e-42 176.8 172 59.3
AT1G09470 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 3.0e-42 176.4 238 46.6
A06p06180 Brassica napus HOM05D003412 ORTHO05D003962 8.7e-42 174.9 275 43.6
CDE02G2375 Ceratophyllum demersum HOM05D000427 ORTHO05D000386 8.7e-42 174.9 163 55.2
BcaC05g29778 Brassica carinata HOM05D003412 ORTHO05D003962 2.5e-41 173.3 160 60.6
Oeu029183.1 Olea europaea HOM05D003412 ORTHO05D003962 9.6e-41 171.4 193 52.3
PSO357G0133 Papaver somniferum HOM05D003412 ORTHO05D003962 1.1e-36 157.9 216 48.1
Rhsim11G0101700 Rhododendron simsii HOM05D003412 ORTHO05D003962 1.1e-33 147.9 180 44.4
CSS0037128 Camellia sinensis var. sinensis HOM05D003412 ORTHO05D003962 7.4e-33 145.2 179 57.5
AT1G09483 Arabidopsis thaliana HOM05D003412 ORTHO05D003962 3.3e-25 119.8 109 66.1
Mapoly0116s0017 Marchantia polymorpha HOM05D003412 ORTHO05D003962 6.5e-21 105.5 191 33.0
Zm00001eb129850 Zea mays HOM05D003412 ORTHO05D003962 3.4e-14 83.2 278 28.4
Os01g0292700 Oryza sativa ssp. japonica HOM05D003412 ORTHO05D003962 1.7e-13 80.9 278 32.4
Zm00001eb075980 Zea mays HOM05D003412 ORTHO05D003962 5.1e-10 69.3 146 38.4
unitig_26.g8997 Utricularia gibba HOM05D003412 ORTHO05D003962 2.0e-09 67.4 183 29.5
Zm00001eb080250 Zea mays HOM05D003412 ORTHO05D003962 4.4e-09 66.2 54 64.8
MBI06_g33528_MAGBIO Magnolia biondii HOM05D003412 ORTHO05D003962 6.9e-07 58.9 39 84.6


User provided reference genes

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