Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 7.3e-104 380.6 193 100.0
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 4.5e-93 344.7 193 88.6
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 2.1e-90 335.9 193 85.5
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 2.8e-87 325.5 191 83.8
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 4.6e-82 308.1 191 79.6
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 7.9e-82 307.4 191 78.0
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 3.0e-81 305.4 190 80.5
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 5.1e-81 304.7 191 78.5
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 1.1e-80 303.5 190 78.4
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 4.3e-80 301.6 192 76.6
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 7.4e-80 300.8 192 76.0
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 2.2e-79 299.3 192 76.0
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.2e-79 299.3 192 76.6
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 2.8e-79 298.9 192 75.5
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 2.8e-79 298.9 192 77.6
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 3.7e-79 298.5 197 75.1
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 6.3e-79 297.7 190 78.4
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 8.2e-79 297.4 191 77.0
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 1.1e-78 297.0 197 77.2
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 4.1e-78 295.0 189 77.2
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 1.2e-77 293.5 191 75.4
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 1.2e-77 293.5 191 77.5
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 1.2e-77 293.5 190 77.9
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 1.5e-77 293.1 192 75.5
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 1.5e-77 293.1 192 76.6
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 1.5e-77 293.1 190 76.3
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 2.0e-77 292.7 190 76.3
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 2.0e-77 292.7 192 75.0
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 2.6e-77 292.4 190 76.3
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 4.5e-77 291.6 190 76.3
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 4.5e-77 291.6 190 76.3
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 1.3e-76 290.0 193 75.6
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 3.8e-76 288.5 190 74.2
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 5.0e-76 288.1 191 78.0
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 6.5e-76 287.7 190 75.3
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 1.1e-75 287.0 190 74.7
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 2.5e-75 285.8 192 75.5
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 4.2e-75 285.0 192 72.9
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 1.6e-74 283.1 190 76.8
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 2.7e-74 282.3 192 72.4
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 3.6e-74 282.0 192 72.4
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 4.6e-74 281.6 192 71.9
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 6.1e-74 281.2 192 72.9
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 7.9e-74 280.8 194 71.6
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 1.0e-73 280.4 192 71.4
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 1.0e-73 280.4 192 71.4
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 1.4e-73 280.0 199 72.9
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 1.4e-73 280.0 192 71.4
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 2.3e-73 279.3 194 71.1
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 3.0e-73 278.9 192 73.4
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 5.1e-73 278.1 190 74.2
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 6.7e-73 277.7 187 73.3
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 8.8e-73 277.3 190 72.1
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 4.3e-72 275.0 194 70.1
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 5.7e-72 274.6 192 72.4
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 7.4e-72 274.2 193 70.5
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 7.4e-72 274.2 190 72.1
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 1.7e-71 273.1 193 69.9
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 2.2e-71 272.7 184 75.0
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 2.2e-71 272.7 193 69.4
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 4.8e-71 271.6 190 70.5
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 6.3e-71 271.2 193 69.9
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 8.2e-71 270.8 190 71.1
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 9.1e-70 267.3 190 70.5
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 1.0e-68 263.8 186 67.2
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 1.3e-68 263.5 194 69.1
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 7.2e-67 257.7 192 69.8
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 9.4e-67 257.3 181 71.3
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 1.2e-66 256.9 189 67.2
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 3.6e-66 255.4 181 70.7
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 4.7e-66 255.0 188 70.7
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 4.7e-66 255.0 223 59.2
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 1.8e-65 253.1 251 55.8
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 1.8e-65 253.1 197 68.0
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 2.3e-65 252.7 191 69.6
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 6.3e-63 244.6 206 62.6
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 8.2e-63 244.2 153 78.4
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 4.5e-61 238.4 150 77.3
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.1e-59 233.8 153 72.5
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 2.1e-58 229.6 190 65.3
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 2.0e-56 223.0 152 71.1
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 1.7e-55 219.9 157 72.6
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 2.4e-54 216.1 198 52.0
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 4.1e-54 215.3 145 75.2
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 2.6e-53 212.6 329 42.9
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 7.7e-53 211.1 158 68.4
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 1.3e-52 210.3 191 57.1
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 3.8e-52 208.8 198 56.6
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.5e-51 206.8 193 57.0
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.9e-51 206.5 200 56.5
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 1.2e-48 197.2 155 68.4
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 2.0e-48 196.4 196 54.1
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 3.7e-47 192.2 134 67.9
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 1.2e-42 177.2 152 61.2
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 8.3e-39 164.5 105 76.2
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.4e-38 163.7 118 67.8
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 1.6e-34 150.2 110 66.4
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 8.0e-34 147.9 106 66.0
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 9.5e-27 124.4 86 70.9
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 7.5e-24 114.8 86 67.4
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 4.6e-21 105.5 143 43.4
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.0e-20 104.4 102 47.1
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 2.3e-20 103.2 208 36.1
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 6.6e-20 101.7 61 78.7
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 1.1e-19 100.9 206 32.0
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.5e-11 73.9 37 89.2
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.5e-11 73.9 37 89.2
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 7.3e-11 71.6 37 86.5
QL05p084699 Quercus lobata HOM05D007122 ORTHO05D008918 2.9e-07 59.7 44 61.4
PRCOL_00002778 Prasinoderma coloniale HOM05D007122 ORTHO05D008918 1.1e-06 57.8 174 32.2
C04p72510 Brassica napus HOM05D000051 ORTHO05D000015 1.9e-06 57.0 95 36.8
BolC4t28739H Brassica oleracea HOM05D000051 ORTHO05D000015 1.9e-06 57.0 95 36.8


User provided reference genes

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