Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 3.9e-214 748.0 435 100.0
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 1.9e-115 420.2 362 66.9
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 7.9e-114 414.8 355 66.5
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 3.3e-112 409.5 355 69.0
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 6.9e-110 401.7 385 63.6
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 3.7e-63 246.5 375 45.3
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 4.3e-59 233.0 345 44.9
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 4.7e-58 229.6 334 46.1
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 5.2e-57 226.1 361 43.5
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 6.8e-57 225.7 377 42.4
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 1.3e-55 221.5 367 42.5
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 1.7e-55 221.1 352 42.3
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 2.1e-53 214.2 391 41.2
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 2.7e-53 213.8 349 43.6
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 3.0e-52 210.3 323 46.1
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 5.6e-51 206.1 405 40.2
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 3.6e-50 203.4 376 40.4
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 6.2e-50 202.6 331 42.9
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.1e-49 201.8 376 39.1
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 1.1e-49 201.8 363 39.1
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 1.2e-48 198.4 459 37.7
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 1.2e-48 198.4 385 36.9
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 4.4e-48 196.4 368 39.1
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 4.4e-48 196.4 458 37.1
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 2.2e-47 194.1 376 41.2
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 2.9e-47 193.7 301 45.5
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.9e-47 193.0 343 40.8
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 6.0e-45 186.0 424 37.3
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 1.0e-44 185.3 351 39.6
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 1.7e-44 184.5 358 39.4
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 2.3e-44 184.1 404 38.4
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 6.6e-44 182.6 385 39.5
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 3.3e-43 180.3 411 34.8
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 4.3e-43 179.9 376 36.4
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 4.3e-43 179.9 385 36.4
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 3.1e-41 173.7 401 36.7
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 6.8e-41 172.6 375 37.3
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 5.8e-40 169.5 391 37.9
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 9.9e-40 168.7 353 38.0
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 9.9e-40 168.7 334 36.5
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 9.9e-40 168.7 373 36.5
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 1.7e-39 167.9 334 36.2
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 3.8e-39 166.8 334 35.9
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 6.4e-39 166.0 332 36.4
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 8.4e-39 165.6 331 37.2
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 8.4e-39 165.6 349 36.7
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 5.4e-38 162.9 344 36.9
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 5.4e-38 162.9 362 37.8
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 1.2e-37 161.8 342 35.1
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 1.6e-37 161.4 354 37.3
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 2.1e-37 161.0 333 39.0
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 2.1e-37 161.0 405 38.0
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 3.5e-37 160.2 320 36.9
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 6.0e-37 159.5 359 35.9
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 6.0e-37 159.5 344 36.9
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 2.3e-36 157.5 341 36.7
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 8.7e-36 155.6 411 35.0
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.1e-35 155.2 329 37.1
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.5e-35 154.8 481 32.6
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.9e-35 154.5 372 36.8
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 2.5e-35 154.1 402 34.3
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.3e-34 151.8 360 34.4
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 1.3e-34 151.8 324 38.0
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 3.6e-34 150.2 404 32.9
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 4.8e-34 149.8 324 37.7
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 8.1e-34 149.1 374 34.8
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 1.4e-33 148.3 283 39.6
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 1.4e-33 148.3 283 39.6
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.8e-33 147.9 370 34.6
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 2.4e-33 147.5 420 31.2
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 2.4e-33 147.5 351 35.9
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 3.1e-33 147.1 496 31.5
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 4.0e-33 146.7 283 39.2
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 9.0e-33 145.6 288 38.5
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 3.4e-32 143.7 343 35.3
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 4.4e-32 143.3 283 37.1
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 5.8e-32 142.9 387 34.6
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 9.9e-32 142.1 370 35.7
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 3.8e-31 140.2 509 29.5
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 6.4e-31 139.4 394 32.5
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 5.4e-30 136.3 280 38.2
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 3.5e-29 133.7 369 36.0
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 5.1e-28 129.8 196 45.4
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 6.6e-28 129.4 281 39.9
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 1.5e-27 128.3 362 33.7
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 2.5e-27 127.5 198 44.4
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.6e-26 123.6 509 28.9
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 8.1e-26 122.5 393 33.1
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 4.0e-25 120.2 261 36.8
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 5.3e-25 119.8 341 33.7
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 5.3e-25 119.8 181 47.0
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 6.9e-25 119.4 275 37.8
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 1.5e-24 118.2 348 33.9
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 2.0e-24 117.9 284 37.7
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 2.6e-24 117.5 266 35.7
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 4.5e-24 116.7 321 35.8
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.8e-23 113.6 474 27.8
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 3.2e-22 110.5 337 31.2
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 9.3e-22 109.0 286 34.6
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 2.7e-21 107.5 501 26.9
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 3.0e-20 104.0 260 33.8
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 8.7e-20 102.4 376 32.2
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 1.5e-19 101.7 399 28.8
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 2.5e-19 100.9 379 31.7
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 2.5e-19 100.9 432 30.1
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 5.6e-19 99.8 497 27.4
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 9.6e-19 99.0 191 38.7
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 1.6e-18 98.2 423 28.8
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.1e-18 97.8 279 34.4
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 6.2e-18 96.3 398 27.6
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 5.3e-17 93.2 336 32.1
Hund04923 Selenicereus undatus HOM05D006297 ORTHO05D007873 5.3e-17 93.2 401 29.2
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.2e-16 92.0 117 49.6
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 4.5e-16 90.1 107 52.3
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 4.5e-16 90.1 107 52.3
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 7.6e-16 89.4 380 29.5
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 2.2e-15 87.8 512 24.8
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.6e-10 71.6 135 35.6
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 2.1e-10 71.2 327 27.5
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 1.1e-09 68.9 108 42.6
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 3.1e-09 67.4 287 29.3
HPP92_015541 Vanilla planifolia HOM05D043147 ORTHO05D007873 3.1e-09 67.4 290 31.0
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 1.0e-07 62.4 351 26.8
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.3e-07 62.0 84 39.3
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.8e-07 60.5 189 31.7
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 3.8e-07 60.5 106 38.7
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 5.0e-07 60.1 146 34.2
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.5e-06 57.8 177 31.6
HPP92_015481 Vanilla planifolia HOM05D043147 ORTHO05D007873 2.5e-06 57.8 113 38.1
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 4.2e-06 57.0 107 37.4
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 4.2e-06 57.0 167 35.3
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 5.5e-06 56.6 189 31.7


User provided reference genes

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