Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 3.0e-196 688.3 346 100.0
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 5.1e-148 528.1 326 80.7
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 3.3e-147 525.4 316 82.3
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 3.4e-136 488.8 325 76.3
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 6.7e-132 474.6 320 72.2
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 2.5e-131 472.6 312 71.8
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.3e-130 470.3 302 71.9
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 6.3e-130 468.0 311 71.4
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.4e-129 466.1 335 69.0
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 2.4e-129 466.1 311 71.4
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 4.1e-129 465.3 303 73.3
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 9.1e-129 464.2 320 71.9
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 3.4e-128 462.2 303 73.3
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 3.4e-128 462.2 311 70.7
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 1.3e-127 460.3 303 71.6
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 3.8e-127 458.8 303 70.6
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 3.8e-127 458.8 329 69.6
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.1e-126 457.2 303 71.0
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.5e-126 456.1 316 68.4
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 3.2e-126 455.7 303 71.6
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 5.5e-126 454.9 314 69.1
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 5.5e-126 454.9 303 72.3
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 5.5e-126 454.9 311 68.5
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 2.7e-125 452.6 332 65.4
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 4.7e-125 451.8 303 71.0
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 6.1e-125 451.4 325 67.4
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 6.1e-125 451.4 306 71.2
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.4e-124 450.3 306 71.6
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 1.8e-124 449.9 304 70.1
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.3e-124 449.5 304 71.4
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 5.1e-124 448.4 316 68.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 5.1e-124 448.4 321 66.7
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 6.7e-124 448.0 307 70.4
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 6.7e-124 448.0 304 70.7
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.1e-123 447.2 308 68.8
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.5e-123 446.8 305 68.5
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.6e-123 446.0 302 70.2
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 3.3e-123 445.7 323 67.5
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 3.3e-123 445.7 319 66.8
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 4.4e-123 445.3 304 71.1
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.3e-122 443.7 303 69.3
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 2.2e-122 443.0 328 67.4
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 2.8e-122 442.6 303 69.3
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 4.8e-122 441.8 328 67.1
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.1e-121 440.7 325 66.8
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.1e-121 440.7 334 66.8
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.8e-121 439.9 313 68.4
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.8e-121 439.9 313 68.4
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 4.1e-121 438.7 307 68.7
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 9.1e-121 437.6 357 61.1
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 2.0e-120 436.4 314 65.9
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 7.7e-120 434.5 347 61.1
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 7.7e-120 434.5 312 68.6
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 3.8e-119 432.2 331 63.1
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 3.8e-119 432.2 324 66.4
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 3.8e-119 432.2 315 67.0
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 6.5e-119 431.4 330 63.3
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 2.5e-118 429.5 312 67.0
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.2e-118 427.9 304 68.4
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 8.0e-117 424.5 318 65.4
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.4e-116 423.7 384 55.5
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 2.3e-116 422.9 329 63.8
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.3e-116 422.9 320 64.7
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 3.0e-116 422.5 326 64.1
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 6.7e-116 421.4 305 68.2
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 8.8e-116 421.0 304 66.4
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.5e-115 420.2 335 63.6
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 7.4e-115 417.9 319 63.6
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 2.2e-114 416.4 310 65.2
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 3.7e-114 415.6 337 62.6
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 4.8e-114 415.2 306 64.7
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 4.8e-114 415.2 315 63.5
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 6.3e-114 414.8 303 66.3
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 3.1e-113 412.5 314 62.7
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.2e-112 410.6 312 64.7
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 4.5e-112 408.7 326 62.9
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 1.3e-111 407.1 340 59.1
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 3.8e-111 405.6 321 62.6
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 6.5e-111 404.8 316 63.9
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 3.2e-110 402.5 312 64.4
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 7.2e-110 401.4 317 62.1
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 2.7e-109 399.4 318 62.3
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 8.0e-109 397.9 312 63.8
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.8e-108 396.7 308 63.3
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 2.3e-108 396.4 312 64.4
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 2.3e-108 396.4 312 64.4
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 8.8e-108 394.4 305 64.9
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 5.7e-107 391.7 314 61.5
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 6.3e-106 388.3 321 61.1
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 8.2e-106 387.9 337 59.1
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 3.4e-99 365.9 312 60.3
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 8.3e-98 361.3 312 58.0
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.9e-94 350.1 242 68.6
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 3.4e-91 339.3 311 54.3
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 3.4e-91 339.3 314 52.5
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 1.7e-90 337.0 242 67.8
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.7e-88 329.7 242 63.6
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 3.5e-88 329.3 241 66.4
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 3.3e-86 322.8 295 53.2
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.2e-83 314.3 318 53.8
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 9.8e-75 284.6 314 47.1
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 1.3e-74 284.3 192 70.3
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 9.5e-70 268.1 323 46.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 5.1e-63 245.7 199 62.3
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 5.1e-63 245.7 199 62.3
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 6.2e-61 238.8 201 58.7
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.1e-60 238.0 157 73.2
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 4.0e-60 236.1 352 41.8
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 8.9e-60 235.0 148 73.6
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.7e-55 220.7 147 68.7
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 4.7e-53 212.6 166 62.0
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.0e-51 207.2 155 65.8
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.2e-49 199.5 153 62.1
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 7.1e-49 198.7 182 58.2
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.2e-48 198.0 151 62.3
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.5e-43 181.0 198 49.0
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 2.9e-42 176.8 149 57.0
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.8e-39 167.5 120 67.5
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 2.3e-39 167.2 303 36.0
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.2e-34 150.6 100 68.0
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 6.0e-32 142.5 299 33.1
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 2.3e-31 140.6 290 34.1
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 3.9e-31 139.8 288 33.7
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 6.7e-31 139.0 293 32.4
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 5.6e-30 136.0 289 34.3
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 5.3e-28 129.4 201 37.8
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 1.3e-26 124.8 81 67.9
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.1e-25 121.7 235 37.0
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 6.0e-24 115.9 113 48.7
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 3.7e-21 106.7 263 31.9
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 3.1e-20 103.6 62 79.0
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.6e-19 100.5 66 71.2
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 4.6e-16 89.7 82 58.5
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 2.4e-12 77.4 56 67.9
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 2.3e-07 60.8 37 75.7


User provided reference genes

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