Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 8.2e-40 166.4 73 100.0
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 1.9e-20 102.1 76 60.5
CsaV3_2G017120 Cucumis sativus L. HOM05D007587 ORTHO05D009657 3.4e-17 91.3 71 57.7
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 6.3e-16 87.0 63 58.7
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 5.9e-14 80.5 62 51.6
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 1.0e-13 79.7 73 46.6
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.3e-13 79.3 45 64.4
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 1.7e-13 79.0 51 56.9
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.7e-13 79.0 73 45.2
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 2.3e-13 78.6 61 52.5
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 3.9e-13 77.8 64 46.9
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 3.9e-13 77.8 47 59.6
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 5.0e-13 77.4 46 58.7
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 6.6e-13 77.0 55 52.7
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 8.6e-13 76.6 46 56.5
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 8.6e-13 76.6 74 41.9
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 8.6e-13 76.6 50 58.0
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 1.1e-12 76.3 46 58.7
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 1.1e-12 76.3 62 46.8
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 1.9e-12 75.5 50 56.0
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.9e-12 75.5 55 54.5
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 3.3e-12 74.7 46 58.7
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 4.3e-12 74.3 46 56.5
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 4.3e-12 74.3 53 50.9
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 5.6e-12 73.9 53 52.8
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 5.6e-12 73.9 54 53.7
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 7.3e-12 73.6 45 57.8
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 7.3e-12 73.6 46 58.7
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 7.3e-12 73.6 44 59.1
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 7.3e-12 73.6 46 56.5
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 9.5e-12 73.2 45 60.0
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 9.5e-12 73.2 45 60.0
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 9.5e-12 73.2 46 56.5
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 9.5e-12 73.2 55 47.3
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 1.2e-11 72.8 46 54.3
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 1.6e-11 72.4 53 49.1
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 1.6e-11 72.4 43 60.5
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 1.6e-11 72.4 53 52.8
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 2.1e-11 72.0 62 45.2
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 3.6e-11 71.2 55 47.3
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 3.6e-11 71.2 55 47.3
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 3.6e-11 71.2 43 55.8
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 3.6e-11 71.2 45 57.8
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 4.7e-11 70.9 50 52.0
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 4.7e-11 70.9 43 53.5
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.7e-11 70.9 46 52.2
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 4.7e-11 70.9 46 52.2
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 4.7e-11 70.9 46 52.2
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 4.7e-11 70.9 61 47.5
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 6.1e-11 70.5 43 55.8
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 8.0e-11 70.1 55 47.3
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 8.0e-11 70.1 53 45.3
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 8.0e-11 70.1 64 45.3
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 8.0e-11 70.1 43 48.8
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.0e-10 69.7 43 53.5
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.0e-10 69.7 43 53.5
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 1.4e-10 69.3 43 51.2
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 1.4e-10 69.3 51 45.1
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 1.8e-10 68.9 46 52.2
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 3.1e-10 68.2 43 53.5
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 3.1e-10 68.2 43 51.2
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 3.1e-10 68.2 45 55.6
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.1e-10 68.2 64 40.6
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 3.1e-10 68.2 55 47.3
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 4.0e-10 67.8 43 53.5
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 4.0e-10 67.8 43 51.2
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 4.0e-10 67.8 43 51.2
Migut.C00432 Erythranthe guttata HOM05D007587 ORTHO05D009657 5.2e-10 67.4 43 53.5
Migut.O00867 Erythranthe guttata HOM05D007587 ORTHO05D009657 5.2e-10 67.4 43 53.5
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 5.2e-10 67.4 43 51.2
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 6.8e-10 67.0 62 40.3
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 6.8e-10 67.0 64 42.2
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 6.8e-10 67.0 43 48.8
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 6.8e-10 67.0 43 51.2
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.2e-09 66.2 50 48.0
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.2e-09 66.2 50 48.0
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.2e-09 66.2 50 48.0
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 1.5e-09 65.9 43 48.8
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.5e-09 65.9 43 53.5
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 1.5e-09 65.9 43 53.5
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 1.5e-09 65.9 43 53.5
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 2.0e-09 65.5 43 53.5
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 2.6e-09 65.1 43 48.8
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 3.4e-09 64.7 50 48.0
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 3.4e-09 64.7 43 51.2
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 3.4e-09 64.7 43 51.2
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 3.4e-09 64.7 43 53.5
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 5.8e-09 63.9 55 45.5
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 2.9e-08 61.6 42 45.2
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 3.2e-07 58.2 49 46.9
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 1.2e-06 56.2 48 43.8


User provided reference genes

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