Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 6.2e-140 500.7 245 100.0
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 4.0e-107 391.7 239 80.3
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 3.5e-103 378.6 239 76.6
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 4.6e-103 378.3 239 76.6
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.2e-74 283.9 225 61.8
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 2.9e-73 279.3 233 59.2
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 1.2e-71 273.9 223 60.5
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.7e-71 272.7 233 59.2
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 8.0e-71 271.2 229 57.2
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.4e-70 270.4 234 57.3
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.3e-70 269.6 232 58.6
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 2.3e-70 269.6 216 58.8
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 3.0e-70 269.2 232 58.6
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 3.0e-70 269.2 234 57.3
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.0e-70 269.2 228 58.3
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 4.0e-70 268.9 222 56.8
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 5.2e-70 268.5 232 58.6
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 2.0e-69 266.5 211 61.6
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 1.3e-68 263.8 224 57.1
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 3.7e-68 262.3 244 56.1
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 2.4e-67 259.6 206 59.2
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.1e-67 259.2 245 55.5
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.2e-66 257.3 224 55.8
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.3e-65 253.8 260 49.6
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 8.5e-65 251.1 229 55.5
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 1.5e-64 250.4 219 56.2
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 5.5e-64 248.4 201 56.7
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 5.5e-64 248.4 227 55.1
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 1.2e-63 247.3 230 53.9
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 3.6e-63 245.7 232 55.6
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 4.7e-63 245.4 210 54.3
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 6.8e-62 241.5 218 53.2
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.2e-61 240.7 225 52.0
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 1.2e-61 240.7 225 52.0
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-61 240.4 214 53.7
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 1.5e-61 240.4 218 52.8
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 2.0e-61 240.0 201 56.7
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 2.6e-61 239.6 238 53.4
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.6e-61 239.6 228 51.3
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 2.6e-61 239.6 200 58.0
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 4.4e-61 238.8 214 54.7
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 5.7e-61 238.4 211 55.0
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 5.7e-61 238.4 212 58.0
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 1.3e-60 237.3 208 55.8
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.2e-60 236.5 210 54.3
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 2.4e-59 233.0 224 52.7
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 9.1e-59 231.1 243 50.2
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.2e-58 230.7 172 61.6
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 2.7e-58 229.6 234 48.7
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 4.5e-58 228.8 215 51.2
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 1.0e-57 227.6 232 50.0
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 2.9e-57 226.1 228 50.4
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 5.0e-57 225.3 206 51.9
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 6.5e-57 224.9 234 48.7
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 6.5e-57 224.9 205 51.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 6.5e-57 224.9 203 52.2
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 1.1e-56 224.2 198 53.0
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 5.5e-56 221.9 238 47.5
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 5.5e-56 221.9 243 46.5
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 7.2e-56 221.5 231 46.3
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 3.6e-55 219.2 219 47.5
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 1.4e-54 217.2 205 50.2
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 2.3e-54 216.5 197 51.3
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 6.8e-54 214.9 247 47.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 6.8e-54 214.9 201 49.3
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 8.8e-54 214.5 217 48.8
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 1.5e-53 213.8 212 49.1
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 3.4e-53 212.6 237 46.4
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.4e-53 212.2 201 48.8
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 4.4e-53 212.2 182 57.7
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 7.5e-53 211.5 198 50.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 9.8e-53 211.1 208 50.5
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 4.9e-52 208.8 200 48.0
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 6.3e-52 208.4 206 50.5
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 6.3e-52 208.4 206 50.5
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 8.3e-52 208.0 209 50.2
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 8.3e-52 208.0 205 48.3
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 3.1e-51 206.1 152 62.5
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 3.1e-51 206.1 210 50.0
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 3.1e-51 206.1 225 44.9
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 4.1e-51 205.7 194 49.5
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 4.1e-51 205.7 195 50.8
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 9.2e-51 204.5 236 46.2
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 1.2e-50 204.1 208 47.6
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 4.5e-50 202.2 205 47.3
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 7.8e-50 201.4 173 52.6
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 1.7e-49 200.3 191 51.3
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 5.0e-49 198.7 214 44.4
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 4.0e-46 189.1 152 53.3
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 1.2e-45 187.6 182 49.5
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 1.3e-44 184.1 221 42.5
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 2.2e-44 183.3 217 44.7
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 7.8e-42 174.9 197 42.1
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 3.9e-41 172.6 197 43.1
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 4.3e-40 169.1 133 59.4
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 1.8e-38 163.7 145 56.6
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 2.9e-36 156.4 233 39.5
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 6.6e-33 145.2 188 40.4
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 8.6e-33 144.8 131 47.3
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 1.3e-28 131.0 117 51.3
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 6.8e-22 108.6 179 36.9
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 8.4e-20 101.7 159 34.0
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 9.3e-11 71.6 111 38.7
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 2.1e-10 70.5 57 56.1
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 1.7e-09 67.4 125 28.8
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 5.1e-09 65.9 71 40.8
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 9.0e-06 55.1 133 32.3


User provided reference genes

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