Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 4.9e-58 227.6 118 100.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.1e-41 173.3 138 70.3
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 7.1e-41 170.6 136 69.9
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 9.2e-41 170.2 138 68.8
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.4e-36 156.4 136 65.4
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 8.4e-26 120.6 106 64.2
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 3.2e-25 118.6 136 50.0
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.6e-24 116.3 99 64.6
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.6e-24 116.3 87 65.5
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 6.0e-24 114.4 90 66.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 1.0e-23 113.6 133 49.6
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 1.3e-23 113.2 139 46.8
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.7e-23 112.8 89 65.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 3.9e-23 111.7 125 51.2
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 6.6e-23 110.9 89 64.0
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 6.6e-23 110.9 89 61.8
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 8.7e-23 110.5 139 48.2
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 2.5e-22 109.0 102 58.8
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 2.5e-22 109.0 130 50.8
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 3.3e-22 108.6 89 65.2
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.3e-22 107.5 130 49.2
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.6e-21 106.3 116 49.1
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 2.1e-21 105.9 145 44.1
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 3.6e-21 105.1 89 60.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.6e-21 105.1 127 45.7
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 4.8e-21 104.8 139 44.6
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.8e-21 104.8 106 58.5
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 8.1e-21 104.0 142 45.1
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 8.1e-21 104.0 134 44.8
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.1e-20 103.6 89 60.7
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.4e-20 103.2 89 60.7
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.8e-20 102.8 102 55.9
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 1.8e-20 102.8 135 47.4
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 2.4e-20 102.4 136 47.8
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 5.3e-20 101.3 92 64.1
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 9.9e-19 97.1 89 55.1
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.3e-18 96.7 91 59.3
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 2.2e-18 95.9 163 42.9
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.9e-18 95.5 164 41.5
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.9e-18 95.5 163 42.9
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 3.8e-18 95.1 74 63.5
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 8.4e-18 94.0 88 56.8
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 8.4e-18 94.0 89 56.2
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.4e-17 93.2 160 42.5
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.9e-17 92.8 90 58.9
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 1.9e-17 92.8 89 56.2
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.4e-17 92.4 141 44.0
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 2.4e-17 92.4 100 55.0
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 2.4e-17 92.4 100 55.0
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 2.4e-17 92.4 90 54.4
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 4.2e-17 91.7 116 50.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 5.4e-17 91.3 159 40.9
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 1.6e-16 89.7 90 55.6
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 4.6e-16 88.2 116 45.7
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 6.0e-16 87.8 90 56.7
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 7.9e-16 87.4 89 56.2
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.0e-15 87.0 91 56.0
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.9e-14 82.8 91 56.0
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.9e-14 82.8 91 56.0
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 2.5e-14 82.4 119 40.3
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 3.3e-14 82.0 90 57.8
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 9.6e-14 80.5 91 52.7
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.3e-13 80.1 108 46.3
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.6e-13 79.7 91 54.9
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 3.7e-13 78.6 132 38.6
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 4.8e-13 78.2 107 49.5
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 4.8e-13 78.2 91 54.9
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 4.8e-13 78.2 88 54.5
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.1e-12 77.0 85 51.8
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 1.1e-12 77.0 91 56.0
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 1.4e-12 76.6 120 45.0
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 1.8e-12 76.3 107 47.7
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 3.1e-12 75.5 91 53.8
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 5.3e-12 74.7 91 53.8
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 6.9e-12 74.3 91 52.7
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 5.8e-11 71.2 104 43.3
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 7.6e-11 70.9 92 53.3
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.9e-11 70.5 91 51.6
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 6.4e-10 67.8 99 43.4
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 8.4e-10 67.4 93 48.4
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 8.4e-10 67.4 93 48.4
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 1.1e-09 67.0 105 41.9
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.2e-09 65.5 68 52.9
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 5.5e-09 64.7 92 51.1
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 5.5e-09 64.7 97 44.3
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 4.6e-08 61.6 94 44.7
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 4.6e-08 61.6 84 45.2
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 6.0e-08 61.2 89 49.4
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-07 60.1 119 37.8
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 1.3e-07 60.1 119 37.8
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-07 59.7 84 46.4
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.8e-07 59.7 68 48.5
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 5.1e-07 58.2 89 46.1
CDE05G0903 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.5e-06 56.6 90 43.3


User provided reference genes

Program Settings