Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017413 Sechium edule HOM05D019397 ORTHO05D009079 8.0e-302 1039.6 530 100.0
Sed0008460 Sechium edule HOM05D007907 ORTHO05D000482 2.4e-96 357.1 210 86.2
Sed0015983 Sechium edule HOM05D007907 ORTHO05D000482 4.1e-80 303.1 226 69.5
Sed0010119 Sechium edule HOM05D019397 ORTHO05D009079 2.3e-75 287.3 262 62.6
Sed0023954 Sechium edule HOM05D007907 ORTHO05D000482 4.0e-75 286.6 392 44.4
Sed0011016 Sechium edule HOM05D007907 ORTHO05D009079 3.4e-58 230.3 533 34.7
Sed0016762 Sechium edule HOM05D025229 ORTHO05D000482 7.8e-55 219.2 244 48.8
Sed0016685 Sechium edule HOM05D019397 ORTHO05D009079 7.0e-48 196.1 209 59.3
MELO3C029011.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.3e-41 175.3 300 37.7
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.6e-36 158.3 298 35.2
MELO3C029044.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.4e-35 154.5 240 38.8
Sed0013335 Sechium edule HOM05D007907 ORTHO05D009079 1.1e-32 145.6 145 55.9
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 2.3e-30 137.9 258 33.3
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.0e-30 137.5 268 32.8
MELO3C030528.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.9e-30 137.1 168 42.9
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 3.6e-28 130.6 237 32.5
Sed0023929 Sechium edule HOM05D007907 ORTHO05D009079 6.2e-28 129.8 265 35.8
MELO3C028279.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.7e-25 121.7 182 37.9
Sed0023912 Sechium edule HOM05D019397 ORTHO05D000482 7.8e-23 112.8 149 49.7
MELO3C034303.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.2e-20 103.2 166 37.3
MELO3C034753.2 Cucumis melo HOM05D007907 ORTHO05D009079 4.0e-19 100.5 119 43.7
MELO3C032179.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.5e-18 98.6 181 34.8
Sed0004924 Sechium edule HOM05D013362 ORTHO05D013626 2.2e-17 94.7 199 31.2
ClCG07G007930 Citrullus lanatus HOM05D007907 ORTHO05D009079 3.0e-14 84.3 284 30.3
Sed0021824 Sechium edule HOM05D013362 ORTHO05D013626 3.0e-14 84.3 154 32.5
Sed0023222 Sechium edule HOM05D007907 ORTHO05D009079 3.0e-14 84.3 176 31.2
PSO384G0927 Papaver somniferum HOM05D009891 ORTHO05D009626 2.5e-13 81.3 248 26.2
PSO339G4551 Papaver somniferum HOM05D009891 ORTHO05D009626 1.6e-12 78.6 248 25.8
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 1.6e-12 78.6 238 30.3
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.8e-12 77.8 252 28.2
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 3.7e-12 77.4 238 30.3
PSO339G5530 Papaver somniferum HOM05D009891 ORTHO05D009626 3.7e-12 77.4 237 26.6
PSO339G2393 Papaver somniferum HOM05D009891 ORTHO05D009626 6.2e-12 76.6 171 28.1
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 8.1e-12 76.3 252 27.8
Nitab4.5_0003525g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-11 75.1 194 27.3
Nitab4.5_0014929g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.8e-11 75.1 215 27.4
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 2.4e-11 74.7 148 33.8
Sed0006677 Sechium edule HOM05D007907 ORTHO05D009079 2.4e-11 74.7 149 35.6
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.1e-11 74.3 242 28.1
PSO339G4311 Papaver somniferum HOM05D009891 ORTHO05D009626 4.0e-11 73.9 247 25.9
PSO339G4394 Papaver somniferum HOM05D009891 ORTHO05D009626 6.9e-11 73.2 245 25.7
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.0e-11 72.8 243 30.5
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.0e-11 72.8 243 30.5
Sed0025466 Sechium edule HOM05D007907 ORTHO05D009079 1.2e-10 72.4 59 61.0
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.6e-10 71.2 164 28.7
Nitab4.5_0009593g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.4e-10 70.9 228 26.3
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 4.5e-10 70.5 159 30.2
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.5e-10 70.5 243 30.0
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 7.6e-10 69.7 154 29.9
Nitab4.5_0004808g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.9e-10 69.3 217 25.8
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 9.9e-10 69.3 228 25.4
Nitab4.5_0009415g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-09 68.9 207 24.6
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.3e-09 68.9 229 29.7
PSO384G3001 Papaver somniferum HOM05D009891 ORTHO05D009626 1.7e-09 68.6 171 26.3
HanXRQChr04g0099531 Helianthus annuus HOM05D010915 ORTHO05D010404 2.2e-09 68.2 220 26.4
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.2e-09 68.2 148 29.7
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 3.8e-09 67.4 218 27.1
Ciclev10020564m.g Citrus clementina HOM05D007816 ORTHO05D000397 3.8e-09 67.4 177 30.5
MELO3C034907.2 Cucumis melo HOM05D008761 ORTHO05D009079 3.8e-09 67.4 205 27.3
CsaV3_3G027900 Cucumis sativus L. HOM05D007907 ORTHO05D009079 3.8e-09 67.4 99 35.4
Nitab4.5_0011972g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.8e-09 67.4 228 25.4
Oeu064355.1 Olea europaea HOM05D008585 ORTHO05D000397 3.8e-09 67.4 126 31.0
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.9e-09 67.0 169 29.0
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.9e-09 67.0 148 29.1
Nitab4.5_0004809g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.4e-09 66.6 149 29.5
MELO3C031312.2 Cucumis melo HOM05D007907 ORTHO05D009079 8.4e-09 66.2 82 42.7
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.4e-09 66.2 167 28.1
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-08 65.9 165 27.3
Ciclev10019150m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.4e-08 65.5 183 31.7
Nitab4.5_0006450g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-08 65.5 146 28.8
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.4e-08 65.5 244 26.2
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-08 65.1 169 27.2
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.9e-08 65.1 145 31.0
Nitab4.5_0009218g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.9e-08 65.1 169 27.2
Solyc10g150130.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 1.9e-08 65.1 145 28.3
MELO3C027609.2 Cucumis melo HOM05D008761 ORTHO05D009079 2.4e-08 64.7 205 25.9
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 2.4e-08 64.7 230 26.1
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.2e-08 64.3 169 27.2
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 3.2e-08 64.3 152 34.2
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.2e-08 64.3 203 29.1
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 4.2e-08 63.9 242 25.6
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 4.2e-08 63.9 242 25.6
Thhalv10023185m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 4.2e-08 63.9 208 28.4
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 4.2e-08 63.9 217 24.9
MELO3C035067.2 Cucumis melo HOM05D008761 ORTHO05D009079 5.5e-08 63.5 125 29.6
Nitab4.5_0000036g0380 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.5e-08 63.5 162 27.2
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.5e-08 63.5 167 26.9
Solyc11g061985.1 Solanum lycopersicum HOM05D002262 ORTHO05D000482 5.5e-08 63.5 145 28.3
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 9.3e-08 62.8 243 26.3
Nitab4.5_0002459g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 9.3e-08 62.8 228 25.9
Nitab4.5_0005705g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.3e-08 62.8 145 27.6
TWI59G0381 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 9.3e-08 62.8 155 27.7
Ciclev10007144m.g Citrus clementina HOM05D007816 ORTHO05D000482 1.2e-07 62.4 182 30.8
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 1.2e-07 62.4 133 28.6
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 1.6e-07 62.0 148 28.4
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 1.6e-07 62.0 145 29.0
TWI77G0421 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.6e-07 62.0 152 33.6
HanXRQChr04g0099501 Helianthus annuus HOM05D010915 ORTHO05D010404 2.1e-07 61.6 228 25.0
PSO339G1629 Papaver somniferum HOM05D010112 ORTHO05D000397 2.1e-07 61.6 162 25.3
Sed0015265 Sechium edule HOM05D008761 ORTHO05D009079 2.1e-07 61.6 211 27.0
Oeu058706.1 Olea europaea HOM05D008585 ORTHO05D000397 2.7e-07 61.2 109 32.1
Nitab4.5_0004407g0030 Nicotiana tabacum HOM05D002262 ORTHO05D000482 3.5e-07 60.8 146 24.7
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-07 60.8 348 23.6
Oeu045767.1 Olea europaea HOM05D006164 ORTHO05D001269 4.6e-07 60.5 133 28.6
Sed0007316 Sechium edule HOM05D013362 ORTHO05D013626 4.6e-07 60.5 93 34.4
TWI74G0172 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 4.6e-07 60.5 152 33.6
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 6.0e-07 60.1 92 38.0
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 7.9e-07 59.7 302 24.8
CANSAT80G2652 Cannabis sativa HOM05D023333 ORTHO05D000137 7.9e-07 59.7 301 24.9
MELO3C029203.2 Cucumis melo HOM05D008761 ORTHO05D009079 7.9e-07 59.7 183 25.7
Nitab4.5_0013206g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000482 7.9e-07 59.7 145 24.8
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 1.0e-06 59.3 133 28.6
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 1.3e-06 58.9 298 24.8
Ciclev10033715m.g Citrus clementina HOM05D007816 ORTHO05D000397 1.3e-06 58.9 177 28.8
MELO3C033964.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.3e-06 58.9 65 43.1
MELO3C034427.2 Cucumis melo HOM05D007907 ORTHO05D009079 1.3e-06 58.9 67 44.8
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.3e-06 58.9 92 40.2
PSO151G0135 Papaver somniferum HOM05D010112 ORTHO05D000397 1.3e-06 58.9 99 34.3
Ciclev10003418m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.8e-06 58.5 106 32.1
PSO151G0021 Papaver somniferum HOM05D010112 ORTHO05D000397 1.8e-06 58.5 171 25.7
Nitab4.5_0001563g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.3e-06 58.2 165 28.5
Nitab4.5_0004436g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.3e-06 58.2 154 28.6
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-06 58.2 217 27.6
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-06 58.2 217 27.2
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.0e-06 57.8 190 25.8
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.0e-06 57.8 154 28.6
Oeu028038.1 Olea europaea HOM05D000700 ORTHO05D000397 3.0e-06 57.8 151 29.1
Sed0014415 Sechium edule HOM05D013362 ORTHO05D013626 3.0e-06 57.8 140 28.6
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 3.0e-06 57.8 165 26.1
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 3.9e-06 57.4 148 27.0
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.9e-06 57.4 158 27.8
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 5.1e-06 57.0 105 30.5
Oeu009243.1 Olea europaea HOM05D000700 ORTHO05D000397 5.1e-06 57.0 174 27.6
PSO339G3521 Papaver somniferum HOM05D010112 ORTHO05D000397 5.1e-06 57.0 141 25.5
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 5.1e-06 57.0 146 27.4
TWI77G0416 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 5.1e-06 57.0 221 29.0
MELO3C028809.2 Cucumis melo HOM05D007907 ORTHO05D009079 6.7e-06 56.6 58 44.8
Nitab4.5_0003021g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.7e-06 56.6 193 26.9
Nitab4.5_0010898g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000482 6.7e-06 56.6 78 35.9
Oeu027805.1 Olea europaea HOM05D000700 ORTHO05D000397 6.7e-06 56.6 169 28.4
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 6.7e-06 56.6 165 25.5
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 6.7e-06 56.6 208 26.0
Thhalv10010916m.g Eutrema salsugineum HOM05D000675 ORTHO05D000395 8.7e-06 56.2 167 28.1
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.7e-06 56.2 188 26.6


User provided reference genes

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