Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017379 Sechium edule HOM05D004865 ORTHO05D005949 1.3e-136 489.6 230 100.0
ClCG11G011710 Citrullus lanatus HOM05D004865 ORTHO05D034719 2.0e-39 166.8 237 43.0
MELO3C031484.2 Cucumis melo HOM05D004865 ORTHO05D005949 1.7e-35 153.7 231 38.5
Sed0006015 Sechium edule HOM05D004865 ORTHO05D034719 1.8e-32 143.7 229 38.0
Sed0001554 Sechium edule HOM05D004865 ORTHO05D034719 3.1e-32 142.9 228 36.4
Sed0001119 Sechium edule HOM05D004865 ORTHO05D005949 2.2e-22 110.2 155 36.8
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 6.4e-22 108.6 227 28.6
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.9e-21 107.1 225 28.9
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.6e-20 104.0 228 28.5
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 4.6e-20 102.4 225 28.4
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.0e-19 101.3 187 30.5
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 2.3e-19 100.1 187 29.4
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.3e-17 94.4 228 27.2
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 2.8e-17 93.2 227 27.3
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 4.8e-17 92.4 215 30.7
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 1.1e-16 91.3 228 29.4
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.4e-16 90.1 198 29.8
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 3.1e-16 89.7 241 27.8
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 4.0e-16 89.4 234 26.9
Sed0020964 Sechium edule HOM05D004865 ORTHO05D005949 4.0e-16 89.4 115 47.0
FAN02G0162 Fragaria x ananassa HOM05D004865 ORTHO05D005949 6.9e-16 88.6 199 30.7
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.2e-15 87.8 228 29.4
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.5e-15 87.4 200 29.0
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 2.6e-15 86.7 231 26.8
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.6e-15 85.1 197 28.4
FAN09G4882 Fragaria x ananassa HOM05D004865 ORTHO05D005949 9.9e-15 84.7 253 27.3
FAN22G1472 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.7e-14 84.0 207 29.5
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-14 84.0 196 28.1
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 4.9e-14 82.4 193 29.0
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.9e-14 82.4 166 31.3
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 1.1e-13 81.3 154 33.1
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 1.1e-13 81.3 154 33.1
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.1e-13 81.3 194 28.9
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 1.9e-13 80.5 226 29.2
FvH4_6g36010 Fragaria vesca HOM05D004865 ORTHO05D005949 1.9e-13 80.5 240 27.5
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 3.2e-13 79.7 169 29.6
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-13 79.7 183 30.6
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.2e-13 79.7 201 26.9
Lj6P379T11 Lonicera japonica HOM05D004865 ORTHO05D005949 4.2e-13 79.3 127 33.1
Lj6P378T3 Lonicera japonica HOM05D004865 ORTHO05D005949 5.4e-13 79.0 127 33.1
Prupe.1G577300 Prunus persica HOM05D004865 ORTHO05D005949 9.3e-13 78.2 144 31.9
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.2e-12 77.8 193 26.9
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-12 77.4 166 31.3
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-12 77.0 197 27.4
DCAR_016015 Daucus carota HOM05D004865 ORTHO05D005949 2.1e-12 77.0 167 28.7
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 2.7e-12 76.6 171 29.2
HanXRQChr14g0437021 Helianthus annuus HOM05D000041 ORTHO05D000452 3.5e-12 76.3 155 30.3
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-12 75.9 197 27.4
Sc23g0005380 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-12 75.9 174 27.0
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 6.0e-12 75.5 150 27.3
Lj1P501T11 Lonicera japonica HOM05D004865 ORTHO05D005949 6.0e-12 75.5 114 36.8
Lj1P506T13 Lonicera japonica HOM05D004865 ORTHO05D005949 6.0e-12 75.5 114 36.8
Lj6P371T8 Lonicera japonica HOM05D004865 ORTHO05D005949 6.0e-12 75.5 127 31.5
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.0e-11 74.7 194 28.9
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-11 74.7 157 30.6
Lj1P506T10 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-11 74.3 114 36.8
Lj1P515T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.3e-11 74.3 114 36.8
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.8e-11 73.9 191 27.2
Lj6P373T4 Lonicera japonica HOM05D004865 ORTHO05D005949 2.3e-11 73.6 128 31.2
Sc22g0001720 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.3e-11 73.6 138 29.7
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.0e-11 73.2 170 28.2
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 3.9e-11 72.8 203 25.6
SGA_v2.0_scaffold105G30447 Striga asiatica HOM05D004865 ORTHO05D005949 3.9e-11 72.8 229 24.9
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.1e-10 71.2 161 31.1
DCAR_015954 Daucus carota HOM05D004865 ORTHO05D005949 1.5e-10 70.9 147 29.3
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 1.9e-10 70.5 182 27.5
FAN14G5541 Fragaria x ananassa HOM05D004865 ORTHO05D005949 1.9e-10 70.5 127 31.5
Lj6C375T0 Lonicera japonica HOM05D004865 ORTHO05D005949 1.9e-10 70.5 117 29.1
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.3e-10 69.7 199 25.1
Lsat_1_v5_gn_8_2701 Lactuca sativa HOM05D000041 ORTHO05D000452 4.3e-10 69.3 235 24.7
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.4e-10 68.6 114 38.6
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.1e-09 67.0 172 27.9
SGA_v2.0_scaffold163G38046 Striga asiatica HOM05D004865 ORTHO05D005949 2.1e-09 67.0 192 28.1
AUR62027396 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.8e-09 66.6 181 26.0
ECA233G0690 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.8e-09 66.6 128 32.0
Zm00001eb137370 Zea mays HOM05D004865 ORTHO05D005949 4.8e-09 65.9 215 25.1
AUR62031151 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.1e-08 64.7 156 28.2
AUR62012571 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-08 64.3 143 28.0
AUR62014649 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-08 64.3 124 33.1
Lj1P308T9 Lonicera japonica HOM05D004865 ORTHO05D005949 1.4e-08 64.3 114 33.3
Lj1P314T6 Lonicera japonica HOM05D004865 ORTHO05D005949 1.4e-08 64.3 114 31.6
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 1.8e-08 63.9 154 28.6
Ah.14g087250 Amaranthus hybridus HOM05D004865 ORTHO05D005949 2.4e-08 63.5 127 29.9
FAN14G3467 Fragaria x ananassa HOM05D004865 ORTHO05D005949 2.4e-08 63.5 121 28.9
Ah.14g087230 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.1e-08 63.2 223 25.6
AUR62036568 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.0e-08 62.8 176 25.0
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 5.3e-08 62.4 147 25.2
HanXRQChr03g0060861 Helianthus annuus HOM05D004865 ORTHO05D005949 1.5e-07 60.8 227 25.1
HanXRQChr03g0060851 Helianthus annuus HOM05D004865 ORTHO05D005949 3.4e-07 59.7 227 25.1
Sc24g0002440 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.4e-07 59.7 112 27.7
Zm00001eb137430 Zea mays HOM05D004865 ORTHO05D005949 4.5e-07 59.3 167 26.3
AUR62044116 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.7e-06 57.4 119 26.9
Sc16g0002960 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.7e-06 57.4 116 29.3
EL10Ac8g20499 Beta vulgaris HOM05D004865 ORTHO05D005949 2.2e-06 57.0 156 25.6
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 2.2e-06 57.0 191 25.1
Ah.14g087270 Amaranthus hybridus HOM05D004865 ORTHO05D005949 3.8e-06 56.2 183 23.5
HanXRQChr14g0461501 Helianthus annuus HOM05D004865 ORTHO05D005949 6.4e-06 55.5 131 32.8


User provided reference genes

Program Settings