Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017290 Sechium edule HOM05D003426 ORTHO05D003816 8.4e-263 909.8 465 100.0
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 2.1e-35 154.5 214 44.9
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 5.4e-28 129.8 207 42.5
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 4.0e-23 113.6 236 38.6
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 2.6e-22 110.9 227 35.2
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 6.0e-19 99.8 261 31.4
Sed0023941 Sechium edule HOM05D003426 ORTHO05D003816 1.3e-18 98.6 112 52.7
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 4.8e-16 90.1 217 33.2
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 4.0e-15 87.0 216 29.6
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 5.3e-15 86.7 261 31.0
Manes.10G096200 Manihot esculenta HOM05D000650 ORTHO05D014428 7.6e-14 82.8 355 24.2
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 3.8e-13 80.5 232 31.9
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 6.5e-13 79.7 242 29.8
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 6.5e-13 79.7 242 29.8
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 1.1e-12 79.0 210 32.4
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 2.1e-11 74.7 240 28.3
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 4.6e-11 73.6 231 27.7
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 4.6e-11 73.6 209 30.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 4.6e-11 73.6 263 32.3
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 1.0e-10 72.4 210 26.7
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 2.3e-10 71.2 211 27.5
Psat7g102120 Pisum sativum HOM05D000650 ORTHO05D007302 2.3e-10 71.2 286 24.5
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 3.0e-10 70.9 209 28.7
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 3.0e-10 70.9 225 28.4
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 6.7e-10 69.7 216 28.7
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 6.7e-10 69.7 116 39.7
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 1.5e-09 68.6 194 29.4
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 1.5e-09 68.6 242 26.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.9e-09 68.2 202 30.2
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.3e-09 67.4 344 24.7
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.3e-09 67.4 292 26.7
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 3.3e-09 67.4 214 28.0
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 4.3e-09 67.0 91 38.5
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 7.4e-09 66.2 226 29.6
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 9.6e-09 65.9 247 29.6
Manes.07G043100 Manihot esculenta HOM05D000650 ORTHO05D015160 1.6e-08 65.1 253 24.5
CSS0041479 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D007302 2.1e-08 64.7 218 25.7
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 2.1e-08 64.7 255 27.8
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 2.1e-08 64.7 255 27.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 2.1e-08 64.7 186 33.9
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 2.8e-08 64.3 188 29.3
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 2.8e-08 64.3 213 27.7
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.8e-08 64.3 245 26.9
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.8e-08 64.3 236 30.9
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 3.7e-08 63.9 213 27.7
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 4.8e-08 63.5 214 29.9
Thhalv10003587m.g Eutrema salsugineum HOM05D001456 ORTHO05D002799 6.3e-08 63.2 288 26.0
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 6.3e-08 63.2 213 27.7
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 6.3e-08 63.2 217 30.4
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 8.2e-08 62.8 120 32.5
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 3.1e-07 60.8 186 31.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 4.1e-07 60.5 124 35.5
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 4.1e-07 60.5 240 26.7
HPP92_015870 Vanilla planifolia HOM05D004872 ORTHO05D006050 4.1e-07 60.5 137 31.4
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 5.3e-07 60.1 142 32.4
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 6.9e-07 59.7 275 29.1
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 6.9e-07 59.7 228 24.6
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 9.0e-07 59.3 217 27.2
Rhsim11G0141100 Rhododendron simsii HOM05D000650 ORTHO05D007302 9.0e-07 59.3 173 30.1
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 1.2e-06 58.9 215 27.4
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 1.2e-06 58.9 212 26.9
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 1.2e-06 58.9 186 31.2
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.5e-06 58.5 153 29.4
Potri.001G283000 Populus trichocarpa HOM05D000650 ORTHO05D007302 1.5e-06 58.5 195 25.1
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.0e-06 58.2 330 22.7
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.0e-06 58.2 145 29.7
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 2.6e-06 57.8 118 32.2
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 2.6e-06 57.8 233 27.5
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 2.6e-06 57.8 185 29.7
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 4.5e-06 57.0 209 26.8
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 7.6e-06 56.2 185 28.6
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 1.0e-05 55.8 219 26.0
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.0e-05 55.8 209 27.3
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 1.0e-05 55.8 279 23.7
Medtr4g093270 Medicago truncatula HOM05D000650 ORTHO05D007302 1.0e-05 55.8 85 41.2


User provided reference genes

Program Settings