Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017257 Sechium edule HOM05D004868 ORTHO05D006030 3.4e-208 728.0 353 100.0
Sed0014615 Sechium edule HOM05D004868 ORTHO05D006030 1.9e-166 589.3 329 86.0
ClCG03G010920 Citrullus lanatus HOM05D004868 ORTHO05D006030 2.2e-162 575.9 327 84.7
CsaV3_1G044760 Cucumis sativus L. HOM05D004868 ORTHO05D006030 9.2e-161 570.5 327 82.9
MELO3C010076.2 Cucumis melo HOM05D004868 ORTHO05D006030 4.5e-160 568.2 327 82.9
MD04G1217100 Malus domestica HOM05D004868 ORTHO05D006030 1.0e-143 513.8 339 74.3
MD12G1234100 Malus domestica HOM05D004868 ORTHO05D006030 2.5e-142 509.2 345 73.0
QL03p000506 Quercus lobata HOM05D004868 ORTHO05D006030 2.1e-141 506.1 339 73.7
AUR62005015 Chenopodium quinoa HOM05D004868 ORTHO05D006030 2.8e-141 505.8 330 75.5
FAN02G0279 Fragaria x ananassa HOM05D004868 ORTHO05D006030 2.8e-141 505.8 332 74.4
QL03p000170 Quercus lobata HOM05D004868 ORTHO05D006030 6.2e-141 504.6 338 73.7
FAN05G2179 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.8e-140 501.1 361 70.9
FAN05G5662 Fragaria x ananassa HOM05D004868 ORTHO05D006030 6.8e-140 501.1 361 70.9
arahy.Tifrunner.gnm1.ann1.WET4Y7 Arachis hypogaea HOM05D004868 ORTHO05D006030 1.2e-139 500.4 334 73.1
FAN09G4706 Fragaria x ananassa HOM05D004868 ORTHO05D006030 1.5e-139 500.0 329 74.2
Sabra05G0042300 Salix brachista HOM05D004868 ORTHO05D006030 2.0e-139 499.6 325 73.8
FAN14G3773 Fragaria x ananassa HOM05D004868 ORTHO05D006030 9.8e-139 497.3 332 73.2
PGR004G1913 Punica granatum HOM05D004868 ORTHO05D006030 9.8e-139 497.3 331 72.2
Gorai.007G286600 Gossypium raimondii HOM05D004868 ORTHO05D006030 2.2e-138 496.1 332 73.5
Phvul.010G080900 Phaseolus vulgaris HOM05D004868 ORTHO05D006030 2.2e-138 496.1 343 70.8
arahy.Tifrunner.gnm1.ann1.VSGL27 Arachis hypogaea HOM05D004868 ORTHO05D006030 6.4e-138 494.6 341 70.7
Lalb_Chr13g0291821 Lupinus albus HOM05D004868 ORTHO05D006030 8.3e-138 494.2 330 72.4
FvH4_6g03940 Fragaria vesca HOM05D004868 ORTHO05D006030 1.9e-137 493.0 332 72.9
Potri.005G046300 Populus trichocarpa HOM05D004868 ORTHO05D006030 2.4e-137 492.7 325 72.9
CiPaw.07G009000 Carya illinoinensis HOM05D004868 ORTHO05D006030 4.1e-137 491.9 332 74.7
TWI12G1223 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 4.1e-137 491.9 329 72.3
Lalb_Chr12g0208121 Lupinus albus HOM05D004868 ORTHO05D006030 2.1e-136 489.6 326 71.8
Lj3g0018370 Lotus japonicus HOM05D004868 ORTHO05D006030 2.7e-136 489.2 323 74.3
Gohir.D11G266800 Gossypium hirsutum HOM05D004868 ORTHO05D006030 3.5e-136 488.8 331 72.8
C07p40470 Brassica napus HOM05D004868 ORTHO05D006030 1.7e-135 486.5 326 72.4
BolC7t44582H Brassica oleracea HOM05D004868 ORTHO05D006030 1.7e-135 486.5 326 72.4
Manes.09G157900 Manihot esculenta HOM05D004868 ORTHO05D006030 2.3e-135 486.1 330 73.0
TWI36G0026 Tripterygium wilfordii HOM05D004868 ORTHO05D006030 3.9e-135 485.3 334 70.7
BcaNung04260 Brassica carinata HOM05D004868 ORTHO05D006030 5.1e-135 485.0 326 72.4
Duzib177G0825 Durio zibethinus HOM05D004868 ORTHO05D006030 1.9e-134 483.0 331 71.9
Hma1.2p1_0332F.1_g127880 Hydrangea macrophylla HOM05D004868 ORTHO05D006030 1.9e-134 483.0 335 71.9
BraA06t26695Z Brassica rapa HOM05D004868 ORTHO05D006030 4.3e-134 481.9 326 71.8
Potri.013G034000 Populus trichocarpa HOM05D004868 ORTHO05D006030 4.3e-134 481.9 325 72.3
Ciclev10001724m.g Citrus clementina HOM05D004868 ORTHO05D006030 5.6e-134 481.5 346 68.8
RcHm_v2.0_Chr3g0452511 Rosa chinensis HOM05D004868 ORTHO05D006030 7.3e-134 481.1 266 83.1
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 3.6e-133 478.8 326 74.2
Gohir.A11G257000 Gossypium hirsutum HOM05D004868 ORTHO05D006030 8.1e-133 477.6 331 71.0
TAR636G1948 Trochodendron aralioides HOM05D004868 ORTHO05D006030 2.3e-132 476.1 315 72.7
CSS0039857 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 4.0e-132 475.3 284 78.2
Glyma.01G139000 Glycine max HOM05D004868 ORTHO05D006030 5.2e-132 474.9 345 67.8
Prupe.6G337200 Prunus persica HOM05D004868 ORTHO05D006030 5.2e-132 474.9 266 82.0
Ah.06g192760 Amaranthus hybridus HOM05D004868 ORTHO05D006030 8.9e-132 474.2 290 77.2
BcaNung04261 Brassica carinata HOM05D004868 ORTHO05D006030 1.2e-131 473.8 326 71.2
CSS0028974 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.5e-131 473.4 284 78.2
Haze_04309 Corylus avellana HOM05D004868 ORTHO05D006030 1.5e-131 473.4 273 81.0
Glyma.03G028300 Glycine max HOM05D004868 ORTHO05D006030 1.5e-131 473.4 338 68.6
CSS0010529 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 2.6e-131 472.6 290 77.2
EL10Ac4g09208 Beta vulgaris HOM05D004868 ORTHO05D006030 5.8e-131 471.5 261 83.9
CANSAT54G1013 Cannabis sativa HOM05D004868 ORTHO05D006030 2.9e-130 469.2 274 79.9
Cfa006482 Carpinus fangiana HOM05D004868 ORTHO05D006030 2.9e-130 469.2 273 81.0
SalBow2G0736 Salvia bowleyana HOM05D004868 ORTHO05D006030 2.9e-130 469.2 315 71.4
Atru.chr2.656 Acer truncatum HOM05D004868 ORTHO05D006030 3.8e-130 468.8 324 70.1
Ah.04g160130 Amaranthus hybridus HOM05D004868 ORTHO05D006030 3.8e-130 468.8 261 82.0
Medtr4g025410 Medicago truncatula HOM05D004868 ORTHO05D006030 4.9e-130 468.4 329 69.0
Thhalv10021106m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 1.9e-129 466.5 329 68.4
Sp3g03920 Schrenkiella parvula HOM05D004868 ORTHO05D006030 2.4e-129 466.1 336 67.6
Rhsim05G0148800 Rhododendron simsii HOM05D004868 ORTHO05D006030 4.1e-129 465.3 276 80.4
Hund07000 Selenicereus undatus HOM05D004868 ORTHO05D006030 4.1e-129 465.3 293 75.8
Cc02_g31280 Coffea canephora HOM05D004868 ORTHO05D006030 5.4e-129 464.9 329 69.6
Nitab4.5_0002361g0200 Nicotiana tabacum HOM05D004868 ORTHO05D006030 1.6e-128 463.4 326 69.9
TPR.G7590 Trifolium pratense HOM05D004868 ORTHO05D006030 1.6e-128 463.4 323 69.0
ECA246G2619 Erigeron canadensis HOM05D004868 ORTHO05D006030 2.7e-128 462.6 319 69.6
Actinidia33836 Actinidia chinensis HOM05D004868 ORTHO05D006030 3.5e-128 462.2 320 73.4
Nitab4.5_0002840g0160 Nicotiana tabacum HOM05D004868 ORTHO05D006030 3.5e-128 462.2 326 69.9
Thecc.05G291500 Theobroma cacao HOM05D004868 ORTHO05D006030 3.5e-128 462.2 335 69.9
CAN.G134.187 Capsicum annuum HOM05D004868 ORTHO05D006030 4.6e-128 461.8 343 66.2
C03p41370 Brassica napus HOM05D004868 ORTHO05D006030 6.0e-128 461.5 323 69.0
BraA03t12574Z Brassica rapa HOM05D004868 ORTHO05D006030 6.0e-128 461.5 323 69.3
A03p33990 Brassica napus HOM05D004868 ORTHO05D006030 7.8e-128 461.1 323 69.3
BcaC01g04334 Brassica carinata HOM05D004868 ORTHO05D006030 1.0e-127 460.7 325 69.5
BolC3t16420H Brassica oleracea HOM05D004868 ORTHO05D006030 1.3e-127 460.3 323 68.7
VMungo0331G1201 Vigna mungo HOM05D004868 ORTHO05D006030 1.3e-127 460.3 332 69.6
Peaxi162Scf00225g00143 Petunia axillaris HOM05D004868 ORTHO05D006030 3.0e-127 459.1 316 71.8
TPR.G39359 Trifolium pratense HOM05D004868 ORTHO05D006030 3.0e-127 459.1 299 72.6
Ca_13816_v3 Cicer arietinum L. HOM05D004868 ORTHO05D006030 3.9e-127 458.8 322 68.6
Thhalv10004543m.g Eutrema salsugineum HOM05D004868 ORTHO05D006030 5.1e-127 458.4 321 69.2
DCAR_022833 Daucus carota HOM05D004868 ORTHO05D006030 8.6e-127 457.6 263 81.0
CSS0000773 Camellia sinensis var. sinensis HOM05D004868 ORTHO05D006030 1.1e-126 457.2 257 82.9
AT3G05100 Arabidopsis thaliana HOM05D004868 ORTHO05D006030 4.3e-126 455.3 335 66.6
Aa31LG11G8840 Aethionema arabicum HOM05D004868 ORTHO05D006030 5.6e-126 454.9 321 68.8
CiPaw.08G177900 Carya illinoinensis HOM05D004868 ORTHO05D006030 5.6e-126 454.9 261 81.6
AL3G15480 Arabidopsis lyrata HOM05D004868 ORTHO05D006030 7.3e-126 454.5 324 67.3
MSTRG.13789 Avicennia marina HOM05D004868 ORTHO05D006030 1.2e-125 453.8 319 69.0
Aa31LG5G15350 Aethionema arabicum HOM05D004868 ORTHO05D006030 1.6e-125 453.4 337 66.5
PGSC0003DMG400022466 Solanum tuberosum HOM05D004868 ORTHO05D006030 1.6e-125 453.4 266 79.3
A05p42480 Brassica napus HOM05D004868 ORTHO05D006030 2.1e-125 453.0 323 66.9
BraA05t23004Z Brassica rapa HOM05D004868 ORTHO05D006030 2.1e-125 453.0 323 66.9
Carub.0003s0434 Capsella rubella HOM05D004868 ORTHO05D006030 2.1e-125 453.0 321 68.8
PSO210G5882 Papaver somniferum HOM05D004868 ORTHO05D006030 2.1e-125 453.0 327 68.5
Solyc01g098040.3 Solanum lycopersicum HOM05D004868 ORTHO05D006030 2.1e-125 453.0 266 79.7
CARHR185710 Cardamine hirsuta HOM05D004868 ORTHO05D006030 2.8e-125 452.6 332 66.6
PSO170G6220 Papaver somniferum HOM05D004868 ORTHO05D006030 2.8e-125 452.6 327 68.5
Sopen01g041620 Solanum pennellii HOM05D004868 ORTHO05D006030 3.6e-125 452.2 266 79.7
Eucgr.H04401 Eucalyptus grandis HOM05D004868 ORTHO05D006030 6.2e-125 451.4 318 69.2
BcaB04g21374 Brassica carinata HOM05D004868 ORTHO05D006030 8.1e-125 451.1 334 65.6
SGA_v2.0_scaffold146G36132 Striga asiatica HOM05D004868 ORTHO05D006030 1.8e-124 449.9 319 68.7
Sp2g20350 Schrenkiella parvula HOM05D004868 ORTHO05D006030 4.0e-124 448.7 308 69.5
BolC5t34872H Brassica oleracea HOM05D004868 ORTHO05D006030 2.0e-123 446.4 317 68.5
Carub.0006s2543 Capsella rubella HOM05D004868 ORTHO05D006030 2.6e-123 446.0 324 67.0
HanXRQChr05g0161431 Helianthus annuus HOM05D004868 ORTHO05D006030 5.8e-123 444.9 313 69.6
Oeu012475.1 Olea europaea HOM05D004868 ORTHO05D006030 9.9e-123 444.1 266 77.8
GSVIVG01021894001 Vitis vinifera HOM05D004868 ORTHO05D006030 2.9e-122 442.6 242 86.0
Lsat_1_v5_gn_9_40320 Lactuca sativa HOM05D004868 ORTHO05D006030 1.9e-121 439.9 257 78.6
MBI18_g14729_MAGBIO Magnolia biondii HOM05D004868 ORTHO05D006030 2.4e-121 439.5 326 67.5
MSTRG.12666 Avicennia marina HOM05D004868 ORTHO05D006030 1.2e-120 437.2 313 67.7
C05p62140 Brassica napus HOM05D004868 ORTHO05D006030 2.3e-119 433.0 321 65.4
AUR62000953 Chenopodium quinoa HOM05D004868 ORTHO05D006030 3.0e-119 432.6 233 86.3
Migut.B00327 Erythranthe guttata HOM05D004868 ORTHO05D006030 3.9e-119 432.2 318 67.9
Lj9A672G84 Lonicera japonica HOM05D004868 ORTHO05D006030 1.5e-118 430.3 242 81.4
HanXRQChr14g0447091 Helianthus annuus HOM05D004868 ORTHO05D006030 3.6e-117 425.6 258 77.9
Aqoxy5G00612 Aquilegia oxysepala HOM05D004868 ORTHO05D006030 8.1e-117 424.5 262 77.1
Zm00001eb110980 Zea mays HOM05D004868 ORTHO05D006030 9.3e-113 411.0 268 72.0
unitig_8.g3689 Utricularia gibba HOM05D004868 ORTHO05D006030 1.6e-112 410.2 322 61.8
Os07g0667400 Oryza sativa ssp. japonica HOM05D004868 ORTHO05D006030 1.3e-111 407.1 266 72.2
ATR0618G246 Amborella trichopoda HOM05D004868 ORTHO05D006030 2.3e-111 406.4 264 73.1
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 3.6e-109 399.1 216 84.3
Sabra13G0033200 Salix brachista HOM05D004868 ORTHO05D006030 1.4e-108 397.1 240 79.6
Dinv02605 Davidia involucrata HOM05D004868 ORTHO05D006030 6.9e-108 394.8 221 81.9
Nn4g26018 Nelumbo nucifera HOM05D004868 ORTHO05D006030 2.6e-107 392.9 219 83.6
vmacro05392 Vaccinium macrocarpon HOM05D004868 ORTHO05D006030 3.4e-107 392.5 219 82.6
Psat7g231080 Pisum sativum HOM05D004868 ORTHO05D006030 1.7e-106 390.2 217 80.6
Lj7C479T1 Lonicera japonica HOM05D004868 ORTHO05D006030 1.6e-104 383.6 217 79.3
HPP92_011336 Vanilla planifolia HOM05D004868 ORTHO05D006030 7.9e-104 381.3 324 61.7
HPP92_016882 Vanilla planifolia HOM05D004868 ORTHO05D006030 3.3e-102 375.9 316 62.3
Dinv02602 Davidia involucrata HOM05D004868 ORTHO05D006030 6.2e-101 371.7 208 82.2
SEGI_16580 Sequoiadendron giganteum HOM05D004868 ORTHO05D006030 9.0e-100 367.9 267 67.0
SHI18309 Sapria himalayana HOM05D004868 ORTHO05D006030 4.9e-98 362.1 217 74.7
SMO203G0024 Selaginella moellendorffii HOM05D004868 ORTHO05D006030 9.3e-97 357.8 319 57.4
AagrBONN_evm.TU.Sc2ySwM_344.3690 Anthoceros agrestis HOM05D004868 ORTHO05D006030 2.4e-92 343.2 317 57.7
Oeu027042.1 Olea europaea HOM05D004868 ORTHO05D006030 2.3e-87 326.6 231 68.4
TAR365G1069 Trochodendron aralioides HOM05D004868 ORTHO05D006030 6.1e-80 302.0 233 65.7
Pp3c9_1110 Physcomitrium patens HOM05D004868 ORTHO05D006030 6.7e-79 298.5 261 56.3
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 4.5e-75 285.8 159 82.4
A06p37760 Brassica napus HOM05D004868 ORTHO05D006030 5.0e-74 282.3 202 70.8
Cpa.g.c47757 Carica papaya HOM05D004868 ORTHO05D006030 1.2e-72 277.7 154 82.5
CDE08G0242 Ceratophyllum demersum HOM05D004868 ORTHO05D006030 6.3e-69 265.4 176 70.5
BcaC05g29994 Brassica carinata HOM05D004868 ORTHO05D006030 2.6e-67 260.0 217 60.8
Sc09g0003690 Simmondsia chinensis HOM05D004868 ORTHO05D006030 3.5e-67 259.6 144 81.9
CARHR079420 Cardamine hirsuta HOM05D004868 ORTHO05D006030 3.8e-66 256.1 214 64.0
Nn3g21303 Nelumbo nucifera HOM05D004868 ORTHO05D006030 5.2e-63 245.7 215 60.0
CDE02G4194 Ceratophyllum demersum HOM05D001090 ORTHO05D002687 9.8e-54 214.9 129 75.2
HPP92_028573 Vanilla planifolia HOM05D004868 ORTHO05D006030 1.6e-48 197.6 147 64.6
BcaB04g19280 Brassica carinata HOM05D004868 ORTHO05D006030 1.8e-36 157.5 167 53.3
BcaNung04262 Brassica carinata HOM05D004868 ORTHO05D027635 4.1e-20 103.2 108 56.5
Lsat_1_v5_gn_5_121600 Lactuca sativa HOM05D004868 ORTHO05D027635 2.8e-16 90.5 79 60.8
Lj7C479T9 Lonicera japonica HOM05D004868 ORTHO05D027635 2.4e-15 87.4 107 53.3
SHI18307 Sapria himalayana HOM05D004868 ORTHO05D027635 2.4e-15 87.4 115 47.0
BolC1t05715H Brassica oleracea HOM05D004868 ORTHO05D006030 1.1e-12 78.6 49 67.3


User provided reference genes

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