Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 3.2e-130 468.4 229 100.0
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 6.9e-109 397.5 230 87.0
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 1.5e-108 396.4 230 86.5
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 1.4e-106 389.8 230 85.2
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.6e-100 369.0 226 80.5
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 7.6e-100 367.5 228 79.8
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 9.3e-98 360.5 229 78.6
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 6.0e-97 357.8 226 78.3
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 77.9
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 1.0e-96 357.1 226 78.3
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 1.3e-96 356.7 226 78.8
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 3.0e-96 355.5 226 77.9
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 3.9e-96 355.1 226 77.0
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 5.1e-96 354.8 229 79.5
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.5e-95 352.4 226 77.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.5e-95 352.4 226 77.0
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 8.2e-94 347.4 226 76.1
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.1e-93 347.1 226 77.4
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 1.4e-93 346.7 231 77.5
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 3.1e-93 345.5 225 75.6
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 3.1e-93 345.5 226 76.1
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 4.1e-93 345.1 226 77.0
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 5.3e-93 344.7 226 74.8
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 5.3e-93 344.7 225 75.6
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 5.3e-93 344.7 226 74.8
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 5.3e-93 344.7 230 75.7
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 5.3e-93 344.7 226 76.5
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 1.5e-92 343.2 225 76.0
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 2.0e-92 342.8 227 78.0
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 4.5e-92 341.7 227 74.0
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 4.5e-92 341.7 227 74.9
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 1.7e-91 339.7 223 75.8
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.7e-91 339.7 225 74.2
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.7e-91 339.7 228 76.3
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.2e-91 339.3 223 75.3
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 8.5e-91 337.4 226 74.8
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 8.5e-91 337.4 225 75.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 1.1e-90 337.0 226 74.3
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 1.1e-90 337.0 223 74.9
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 1.4e-90 336.7 226 74.3
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 1.4e-90 336.7 226 75.2
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 2.5e-90 335.9 226 74.8
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 7.2e-90 334.3 225 74.7
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 7.2e-90 334.3 225 74.7
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 9.4e-90 334.0 225 74.7
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 9.4e-90 334.0 225 74.2
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 9.4e-90 334.0 225 74.2
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 9.4e-90 334.0 226 74.8
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 2.1e-89 332.8 229 73.4
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.6e-89 332.0 225 73.8
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 4.6e-89 331.6 226 73.9
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 7.9e-89 330.9 226 73.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 7.9e-89 330.9 232 72.4
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 1.0e-88 330.5 227 74.4
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 2.3e-88 329.3 224 73.2
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 2.3e-88 329.3 226 73.5
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 3.0e-88 328.9 234 70.1
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 3.9e-88 328.6 226 73.5
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 3.9e-88 328.6 238 70.2
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.5e-87 326.6 227 72.2
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 1.5e-87 326.6 252 68.3
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 2.0e-87 326.2 228 71.9
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 2.0e-87 326.2 228 72.8
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 4.3e-87 325.1 227 72.2
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 7.4e-87 324.3 234 72.2
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.7e-86 323.2 228 70.2
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.7e-86 323.2 224 72.3
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 1.7e-86 323.2 224 72.3
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 3.7e-86 322.0 248 67.7
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 1.1e-85 320.5 226 71.2
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.4e-85 319.3 212 76.4
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 3.1e-85 318.9 210 76.7
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 4.1e-85 318.5 209 75.1
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 9.1e-85 317.4 247 66.4
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 1.2e-84 317.0 227 69.2
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.2e-83 312.8 214 74.8
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 2.2e-83 312.8 227 69.2
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 1.4e-82 310.1 227 68.7
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 7.2e-82 307.8 261 62.1
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 9.4e-82 307.4 234 67.5
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 2.1e-81 306.2 211 73.9
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 3.6e-81 305.4 211 73.5
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 4.7e-81 305.1 227 67.4
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 6.7e-80 301.2 210 72.4
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.5e-79 300.1 209 71.3
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 1.7e-78 296.6 233 68.2
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 2.2e-78 296.2 212 70.3
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 4.8e-78 295.0 226 69.0
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 8.2e-78 294.3 236 65.7
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 1.1e-77 293.9 223 68.2
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 1.4e-77 293.5 226 69.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 1.7e-75 286.6 245 62.4
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 4.7e-73 278.5 230 67.0
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 1.4e-72 276.9 152 85.5
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 4.8e-70 268.5 177 76.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 1.8e-69 266.5 210 68.6
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 7.0e-69 264.6 174 70.7
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 7.7e-68 261.2 175 69.1
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 1.0e-64 250.8 230 59.1
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 2.3e-64 249.6 238 57.6
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 2.8e-62 242.7 228 58.3
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 3.7e-62 242.3 145 77.9
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.1e-61 240.7 209 63.6
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 3.5e-60 235.7 335 44.8
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 4.5e-60 235.3 226 56.6
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 1.6e-57 226.9 157 71.3
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 2.7e-57 226.1 143 77.6
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 4.0e-56 222.2 157 72.0
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 6.8e-56 221.5 161 62.7
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 4.4e-55 218.8 123 81.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 3.6e-49 199.1 128 68.0
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 7.8e-44 181.4 173 53.8
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 7.5e-39 164.9 134 59.0
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 2.0e-36 156.8 158 48.7
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.1e-28 130.2 63 93.7
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.5e-26 124.0 85 65.9
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 7.3e-26 121.7 63 85.7
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 1.4e-24 117.5 67 79.1
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 7.8e-20 101.7 144 43.1
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 5.6e-18 95.5 91 58.2
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 2.8e-17 93.2 125 47.2


User provided reference genes

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