Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017147 Sechium edule HOM05D006874 ORTHO05D008334 2.3e-271 938.3 478 100.0
MELO3C016836.2 Cucumis melo HOM05D006874 ORTHO05D008334 3.5e-123 446.0 342 69.6
CsaV3_4G035240 Cucumis sativus L. HOM05D006874 ORTHO05D008334 5.1e-122 442.2 340 69.4
ClCG05G026570 Citrullus lanatus HOM05D006874 ORTHO05D008334 3.8e-117 426.0 342 67.8
Manes.18G049200 Manihot esculenta HOM05D006874 ORTHO05D008334 2.0e-33 147.9 381 35.2
TAR628G0654 Trochodendron aralioides HOM05D006874 ORTHO05D008334 4.4e-33 146.7 383 34.7
Nn6g34522 Nelumbo nucifera HOM05D006874 ORTHO05D008334 4.1e-31 140.2 373 32.4
Manes.05G183400 Manihot esculenta HOM05D006874 ORTHO05D008334 5.4e-31 139.8 377 34.0
Thecc.08G084900 Theobroma cacao HOM05D006874 ORTHO05D008334 1.0e-29 135.6 367 35.4
QL12p038579 Quercus lobata HOM05D006874 ORTHO05D008334 9.5e-28 129.0 393 32.8
Cfa013741 Carpinus fangiana HOM05D006874 ORTHO05D008334 1.4e-26 125.2 377 33.4
MD08G1078600 Malus domestica HOM05D006874 ORTHO05D008334 1.2e-25 122.1 391 30.9
TWI56G0226 Tripterygium wilfordii HOM05D006874 ORTHO05D008334 1.2e-25 122.1 378 30.4
Dinv39206 Davidia involucrata HOM05D006874 ORTHO05D008334 3.4e-25 120.6 362 32.6
Prupe.1G419500 Prunus persica HOM05D006874 ORTHO05D008334 4.4e-25 120.2 368 32.6
RcHm_v2.0_Chr6g0309981 Rosa chinensis HOM05D006874 ORTHO05D008334 7.6e-25 119.4 364 32.7
Nn5g30659 Nelumbo nucifera HOM05D006874 ORTHO05D008334 1.7e-24 118.2 383 30.5
Duzib093G1642 Durio zibethinus HOM05D006874 ORTHO05D008334 4.9e-24 116.7 376 34.3
Duzib116G0206 Durio zibethinus HOM05D006874 ORTHO05D008334 1.1e-23 115.5 374 32.4
Aqoxy6G02484 Aquilegia oxysepala HOM05D006874 ORTHO05D008334 1.9e-23 114.8 395 27.8
Haze_22393 Corylus avellana HOM05D006874 ORTHO05D008334 6.0e-22 109.8 398 30.9
Haze_22401 Corylus avellana HOM05D006874 ORTHO05D008334 6.0e-22 109.8 398 30.9
FvH4_2g32690 Fragaria vesca HOM05D006874 ORTHO05D008334 6.0e-22 109.8 365 31.5
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 2.3e-21 107.8 377 31.6
Eucgr.F02227 Eucalyptus grandis HOM05D006874 ORTHO05D008334 3.9e-21 107.1 368 28.8
FAN15G0895 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.1e-21 106.7 363 31.7
FAN27G0759 Fragaria x ananassa HOM05D006874 ORTHO05D008334 8.6e-21 105.9 368 30.7
PGR031G0049 Punica granatum HOM05D006874 ORTHO05D008334 1.5e-20 105.1 374 28.3
Actinidia19297 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.9e-20 104.8 359 30.1
Ca_15889_v3 Cicer arietinum L. HOM05D006874 ORTHO05D008334 7.3e-20 102.8 353 30.9
Lalb_Chr23g0267621 Lupinus albus HOM05D006874 ORTHO05D008334 1.6e-19 101.7 385 29.9
Ciclev10016010m.g Citrus clementina HOM05D006874 ORTHO05D008334 4.0e-18 97.1 347 29.1
Medtr3g103400 Medicago truncatula HOM05D006874 ORTHO05D008334 6.9e-18 96.3 375 29.1
Sabra14G0008000 Salix brachista HOM05D006874 ORTHO05D008334 6.9e-18 96.3 372 28.5
MBI16_g45151_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 7.6e-17 92.8 383 27.9
Potri.014G013200 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.3e-16 92.0 377 27.6
Atru.chr13.867 Acer truncatum HOM05D006874 ORTHO05D008334 1.7e-16 91.7 293 33.1
Glyma.06G048600 Glycine max HOM05D006874 ORTHO05D008334 2.9e-16 90.9 389 28.3
Potri.002G115600 Populus trichocarpa HOM05D006874 ORTHO05D008334 3.8e-16 90.5 376 27.9
Actinidia10219 Actinidia chinensis HOM05D006874 ORTHO05D008334 1.4e-15 88.6 361 27.4
Gohir.A05G211900 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.2e-15 87.0 356 31.2
Glyma.17G233100 Glycine max HOM05D006874 ORTHO05D008334 5.4e-15 86.7 372 29.6
Gohir.D05G215200 Gossypium hirsutum HOM05D006874 ORTHO05D008334 5.4e-15 86.7 358 30.4
PSO541G5864 Papaver somniferum HOM05D006874 ORTHO05D008334 7.1e-15 86.3 402 28.6
PSO675G5853 Papaver somniferum HOM05D006874 ORTHO05D008334 7.1e-15 86.3 408 28.9
Dinv09539 Davidia involucrata HOM05D006874 ORTHO05D008334 1.6e-14 85.1 341 25.5
Lj1g0014879 Lotus japonicus HOM05D006874 ORTHO05D008334 2.1e-14 84.7 346 30.1
Gorai.010G027100 Gossypium raimondii HOM05D006874 ORTHO05D008334 2.7e-14 84.3 356 28.4
Oeu053642.1 Olea europaea HOM05D006874 ORTHO05D008334 2.7e-14 84.3 356 27.8
Gorai.009G221900 Gossypium raimondii HOM05D006874 ORTHO05D008334 3.5e-14 84.0 362 29.8
Psat0s1031g0080 Pisum sativum HOM05D006874 ORTHO05D008334 3.5e-14 84.0 350 28.3
Cfa004701 Carpinus fangiana HOM05D006874 ORTHO05D008334 4.6e-14 83.6 365 27.1
Gohir.D06G022500 Gossypium hirsutum HOM05D006874 ORTHO05D008334 4.6e-14 83.6 356 28.4
Medtr1g017530 Medicago truncatula HOM05D006874 ORTHO05D008334 4.6e-14 83.6 363 30.3
Gohir.A06G025400 Gossypium hirsutum HOM05D006874 ORTHO05D008334 7.8e-14 82.8 356 28.1
EL10Ac1g02352 Beta vulgaris HOM05D006874 ORTHO05D008334 1.3e-13 82.0 370 25.7
CANSAT25G0531 Cannabis sativa HOM05D006874 ORTHO05D008334 3.0e-13 80.9 369 26.0
MBI16_g41242_MAGBIO Magnolia biondii HOM05D006874 ORTHO05D008334 3.0e-13 80.9 158 32.3
AUR62035010 Chenopodium quinoa HOM05D006874 ORTHO05D008334 5.1e-13 80.1 375 24.8
MD15G1065400 Malus domestica HOM05D006874 ORTHO05D008334 5.1e-13 80.1 182 36.3
Psat5g037000 Pisum sativum HOM05D006874 ORTHO05D008334 1.9e-12 78.2 354 27.4
TPR.G13116 Trifolium pratense HOM05D006874 ORTHO05D008334 2.5e-12 77.8 359 28.7
Glyma.14G089075 Glycine max HOM05D006874 ORTHO05D008334 3.3e-12 77.4 364 29.4
Phvul.001G029700 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.3e-12 77.4 365 26.6
vmacro21419 Vaccinium macrocarpon HOM05D006874 ORTHO05D008334 7.3e-12 76.3 372 26.9
CiPaw.06G164000 Carya illinoinensis HOM05D006874 ORTHO05D008334 9.6e-12 75.9 356 25.6
Potri.001G290000 Populus trichocarpa HOM05D006874 ORTHO05D008334 9.6e-12 75.9 355 27.9
MSTRG.24387 Avicennia marina HOM05D006874 ORTHO05D008334 1.3e-11 75.5 352 27.8
AUR62037457 Chenopodium quinoa HOM05D006874 ORTHO05D008334 2.8e-11 74.3 385 25.2
CSS0036555 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 3.6e-11 73.9 171 32.2
Lj5g0027457 Lotus japonicus HOM05D006874 ORTHO05D008334 3.6e-11 73.9 363 27.5
Phvul.009G073900 Phaseolus vulgaris HOM05D006874 ORTHO05D008334 3.6e-11 73.9 378 27.0
FAN24G0724 Fragaria x ananassa HOM05D006874 ORTHO05D008334 4.8e-11 73.6 163 35.6
Sabra02G0091300 Salix brachista HOM05D006874 ORTHO05D008334 4.8e-11 73.6 344 27.0
Hund05278 Selenicereus undatus HOM05D006874 ORTHO05D008334 1.8e-10 71.6 395 25.8
Haze_10303 Corylus avellana HOM05D006874 ORTHO05D008334 2.4e-10 71.2 350 28.3
CiPaw.07G172200 Carya illinoinensis HOM05D006874 ORTHO05D008334 9.0e-10 69.3 368 27.7
VMungo1309G0435 Vigna mungo HOM05D006874 ORTHO05D008334 1.5e-09 68.6 383 25.1
Sabra16G0181500 Salix brachista HOM05D006874 ORTHO05D008334 5.8e-09 66.6 345 25.5
CSS0007120 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 7.6e-09 66.2 346 27.2
CSS0047478 Camellia sinensis var. sinensis HOM05D006874 ORTHO05D008334 9.9e-09 65.9 342 27.8
TAR625G1551 Trochodendron aralioides HOM05D006874 ORTHO05D008334 1.3e-08 65.5 148 33.8
ATR0739G189 Amborella trichopoda HOM05D006874 ORTHO05D008334 2.2e-08 64.7 300 27.3
Rhsim06G0064400 Rhododendron simsii HOM05D006874 ORTHO05D008334 2.9e-08 64.3 357 25.8
Cc10_g07600 Coffea canephora HOM05D006874 ORTHO05D008334 3.8e-08 63.9 356 27.2
Cpa.g.sc524.2 Carica papaya HOM05D006874 ORTHO05D008334 6.4e-08 63.2 365 25.8
Migut.C00474 Erythranthe guttata HOM05D006874 ORTHO05D008334 1.4e-07 62.0 349 25.5
Potri.009G085500 Populus trichocarpa HOM05D006874 ORTHO05D008334 1.4e-07 62.0 361 27.4
Psat6g017400 Pisum sativum HOM05D006874 ORTHO05D008334 2.4e-07 61.2 353 26.6
QL11p029345 Quercus lobata HOM05D006874 ORTHO05D008334 7.1e-07 59.7 370 24.6
Ah.00g238010 Amaranthus hybridus HOM05D024306 ORTHO05D012960 9.3e-07 59.3 349 26.6
Hma1.2p1_1170F.1_g263450 Hydrangea macrophylla HOM05D006874 ORTHO05D008334 1.2e-06 58.9 122 32.0
MSTRG.25026 Avicennia marina HOM05D006874 ORTHO05D008334 1.6e-06 58.5 121 32.2
Manes.07G056800 Manihot esculenta HOM05D006874 ORTHO05D008334 6.0e-06 56.6 279 25.1


User provided reference genes

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