Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 8.4e-177 623.6 327 100.0
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 8.8e-134 480.7 317 81.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 2.2e-116 422.9 318 73.9
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.2e-98 364.0 336 61.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.5e-98 362.5 328 62.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 5.1e-97 358.6 325 60.6
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 9.6e-96 354.4 333 61.6
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 9.6e-96 354.4 322 62.7
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 3.6e-95 352.4 332 61.1
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.2e-95 351.7 329 62.3
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 2.4e-94 349.7 342 57.9
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 3.1e-94 349.4 334 58.4
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 3.1e-94 349.4 338 58.6
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.5e-93 347.1 338 59.2
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.6e-93 346.3 260 74.2
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 7.6e-93 344.7 336 56.2
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.3e-92 344.0 329 60.8
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.7e-92 343.6 334 61.7
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 2.2e-92 343.2 329 59.0
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 3.8e-92 342.4 331 58.9
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.9e-91 340.1 327 59.3
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 9.3e-91 337.8 321 59.8
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-90 337.4 333 56.5
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 2.1e-90 336.7 329 59.3
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.3e-89 334.0 333 55.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.7e-89 333.6 325 58.8
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.7e-89 333.6 325 59.4
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.0e-89 332.8 325 58.8
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 3.0e-89 332.8 331 57.1
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.1e-88 330.9 333 58.0
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.1e-88 330.9 341 55.1
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.3e-88 329.3 325 58.2
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 5.6e-88 328.6 327 58.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 9.6e-88 327.8 333 57.7
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.6e-87 327.0 333 58.0
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.6e-87 327.0 328 57.9
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.8e-87 326.2 327 55.7
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.6e-87 325.9 325 58.2
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 3.6e-87 325.9 327 58.1
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 4.8e-87 325.5 315 59.0
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 6.2e-87 325.1 336 56.2
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 6.2e-87 325.1 364 53.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.1e-86 324.3 326 57.1
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.1e-86 324.3 330 58.2
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.4e-86 323.9 325 56.3
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.8e-86 323.6 315 58.4
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.1e-86 322.8 315 58.1
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.5e-85 320.5 326 57.4
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.5e-85 320.5 331 56.2
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 2.6e-85 319.7 319 56.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 2.6e-85 319.7 320 56.6
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.4e-85 319.3 326 55.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 5.8e-85 318.5 329 54.4
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 5.8e-85 318.5 333 56.2
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 7.6e-85 318.2 322 58.4
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.3e-84 317.4 330 57.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.7e-84 317.0 332 56.3
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 8.4e-84 314.7 321 57.3
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 8.4e-84 314.7 332 55.1
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.1e-83 314.3 327 55.7
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.4e-83 313.9 340 55.6
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.9e-83 313.5 321 57.9
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.4e-83 313.2 329 55.0
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.4e-83 313.2 323 55.1
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.2e-82 310.8 327 56.6
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.2e-82 310.8 327 56.6
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 6.0e-82 308.5 331 53.5
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 6.0e-82 308.5 318 54.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 7.8e-82 308.1 319 53.3
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 2.3e-81 306.6 333 54.1
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 8.7e-81 304.7 343 53.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 4.3e-80 302.4 431 44.8
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.3e-79 300.8 315 54.6
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.8e-79 299.7 331 51.4
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.8e-79 298.9 337 52.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.4e-78 296.6 323 53.3
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 2.4e-78 296.6 326 52.5
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 4.0e-78 295.8 316 57.6
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 2.0e-77 293.5 315 53.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 9.9e-77 291.2 317 52.4
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.9e-76 289.7 317 50.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 4.9e-76 288.9 341 53.1
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 3.5e-74 282.7 325 51.1
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 1.0e-73 281.2 320 51.9
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 5.1e-73 278.9 366 48.6
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.5e-72 277.3 338 48.8
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 2.4e-70 270.0 326 52.5
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 3.1e-70 269.6 280 53.9
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.2e-69 267.7 338 51.2
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.1e-66 256.9 257 59.1
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.1e-64 251.1 275 55.6
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.6e-63 247.3 322 47.2
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.3e-57 226.9 380 39.5
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 4.8e-55 219.2 414 38.9
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.1e-46 191.4 229 49.8
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 5.9e-45 185.7 182 57.7
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 3.8e-44 183.0 375 33.1
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.0e-41 174.9 349 35.5
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 2.6e-40 170.2 202 50.5
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 7.0e-38 162.2 137 66.4
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 2.2e-36 157.1 286 38.1
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 1.2e-29 134.8 95 69.5
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.1e-26 124.0 222 38.3
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 8.0e-26 122.1 472 26.3
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 2.9e-20 103.6 106 52.8
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.0e-20 102.8 70 78.6
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.9e-19 100.9 90 61.1
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.6e-18 97.8 179 39.1
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.6e-18 97.8 127 42.5
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 6.1e-18 95.9 253 29.2
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.3e-17 94.0 60 71.7
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 6.8e-17 92.4 73 64.4
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.2e-15 87.4 266 29.3
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 4.1e-14 83.2 259 29.3
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.8e-12 76.6 55 70.9
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 2.5e-11 73.9 46 73.9
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.3e-11 73.6 48 64.6
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 9.5e-11 72.0 45 66.7
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.6e-10 71.2 59 59.3
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 2.2e-07 60.8 44 61.4
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 9.2e-06 55.5 242 24.8


User provided reference genes

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