Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017131 Sechium edule HOM05D007398 ORTHO05D004912 1.4e-66 256.1 128 100.0
ClCG02G008700 Citrullus lanatus HOM05D007398 ORTHO05D004912 3.7e-35 151.8 134 62.7
Sed0025347 Sechium edule HOM05D007398 ORTHO05D004912 2.2e-32 142.5 134 59.0
Cfa014400 Carpinus fangiana HOM05D007398 ORTHO05D004912 3.7e-19 98.6 132 47.7
ClCG00G003290 Citrullus lanatus HOM05D007398 ORTHO05D004912 6.3e-19 97.8 126 46.8
ClCG02G001930 Citrullus lanatus HOM05D007398 ORTHO05D004912 6.3e-19 97.8 126 46.8
Haze_12865 Corylus avellana HOM05D007398 ORTHO05D004912 3.1e-18 95.5 133 48.1
Hma1.2p1_0328F.1_g126925 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 3.1e-18 95.5 124 49.2
Hma1.2p1_0328F.1_g126930 Hydrangea macrophylla HOM05D007398 ORTHO05D004912 3.1e-18 95.5 124 49.2
TWI75G1275 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 5.3e-18 94.7 116 49.1
Atru.chr6.3183 Acer truncatum HOM05D007398 ORTHO05D004912 9.1e-18 94.0 127 48.8
Atru.chr6.3184 Acer truncatum HOM05D007398 ORTHO05D004912 1.6e-17 93.2 127 48.8
CANSAT64G0797 Cannabis sativa HOM05D007398 ORTHO05D004912 4.5e-17 91.7 135 48.9
MELO3C018817.2 Cucumis melo HOM05D007398 ORTHO05D004912 7.7e-17 90.9 126 45.2
Sed0010410 Sechium edule HOM05D007398 ORTHO05D004912 1.3e-16 90.1 125 45.6
CsaV3_7G003580 Cucumis sativus L. HOM05D007398 ORTHO05D004912 3.8e-16 88.6 124 46.0
RcHm_v2.0_Chr2g0159281 Rosa chinensis HOM05D007398 ORTHO05D004912 5.0e-16 88.2 127 49.6
ClCG03G014620 Citrullus lanatus HOM05D032147 ORTHO05D034646 8.5e-16 87.4 122 46.7
FAN02G4350 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.9e-15 86.3 128 50.0
Dinv39711 Davidia involucrata HOM05D007398 ORTHO05D004912 2.5e-15 85.9 123 46.3
Psat5g264000 Pisum sativum HOM05D007398 ORTHO05D004912 2.5e-15 85.9 105 48.6
Ca_01601_v3 Cicer arietinum L. HOM05D007398 ORTHO05D004912 4.2e-15 85.1 108 48.1
FAN10G4171 Fragaria x ananassa HOM05D007398 ORTHO05D004912 7.2e-15 84.3 127 50.4
FAN05G1963 Fragaria x ananassa HOM05D007398 ORTHO05D004912 9.4e-15 84.0 128 49.2
TPR.G4189 Trifolium pratense HOM05D007398 ORTHO05D004912 9.4e-15 84.0 105 49.5
TAR626G0532 Trochodendron aralioides HOM05D007398 ORTHO05D004912 9.4e-15 84.0 126 43.7
FvH4_6g43180 Fragaria vesca HOM05D007398 ORTHO05D004912 1.2e-14 83.6 127 49.6
Glyma.13G308800 Glycine max HOM05D007398 ORTHO05D004912 1.6e-14 83.2 126 49.2
Actinidia30523 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.7e-14 82.4 128 45.3
FAN14G0586 Fragaria x ananassa HOM05D007398 ORTHO05D004912 2.7e-14 82.4 128 49.2
CSS0017183 Camellia sinensis var. sinensis HOM05D007398 ORTHO05D004912 3.6e-14 82.0 124 46.8
Thecc.02G314700 Theobroma cacao HOM05D007398 ORTHO05D004912 3.6e-14 82.0 126 46.0
CiPaw.03G160000 Carya illinoinensis HOM05D007398 ORTHO05D004912 4.7e-14 81.6 131 45.8
Ciclev10017196m.g Citrus clementina HOM05D007398 ORTHO05D004912 6.1e-14 81.3 125 46.4
Nn1g03511 Nelumbo nucifera HOM05D007398 ORTHO05D004912 6.1e-14 81.3 125 42.4
MD09G1108900 Malus domestica HOM05D007398 ORTHO05D004912 8.0e-14 80.9 127 47.2
TAR629G1636 Trochodendron aralioides HOM05D007398 ORTHO05D004912 1.0e-13 80.5 127 43.3
MD17G1096900 Malus domestica HOM05D007398 ORTHO05D004912 1.4e-13 80.1 128 47.7
Prupe.3G217200 Prunus persica HOM05D007398 ORTHO05D004912 1.4e-13 80.1 128 49.2
Duzib251G0280 Durio zibethinus HOM05D007398 ORTHO05D004912 1.8e-13 79.7 124 46.8
arahy.Tifrunner.gnm1.ann1.TIC55L Arachis hypogaea HOM05D007398 ORTHO05D004912 4.0e-13 78.6 126 46.0
TWI18G0787 Tripterygium wilfordii HOM05D007398 ORTHO05D004912 4.0e-13 78.6 128 46.1
TAR627G0987 Trochodendron aralioides HOM05D007398 ORTHO05D004912 4.0e-13 78.6 125 42.4
Medtr2g088320 Medicago truncatula HOM05D007398 ORTHO05D004912 6.8e-13 77.8 89 49.4
COL.COLO4_27711 Corchorus olitorius HOM05D007398 ORTHO05D004912 1.2e-12 77.0 125 47.2
FAN09G1954 Fragaria x ananassa HOM05D007398 ORTHO05D004912 1.2e-12 77.0 127 48.0
Glyma.12G193700 Glycine max HOM05D007398 ORTHO05D004912 1.5e-12 76.6 124 43.5
QL08p033081 Quercus lobata HOM05D007398 ORTHO05D004912 1.5e-12 76.6 115 47.0
arahy.Tifrunner.gnm1.ann1.X0QM4L Arachis hypogaea HOM05D007398 ORTHO05D004912 2.0e-12 76.3 125 44.8
BraA03t10733Z Brassica rapa HOM05D009587 ORTHO05D004912 4.4e-12 75.1 124 38.7
Sed0017095 Sechium edule HOM05D007398 ORTHO05D004912 4.4e-12 75.1 128 40.6
Lsat_1_v5_gn_7_92201 Lactuca sativa HOM05D007398 ORTHO05D004912 5.7e-12 74.7 136 39.7
VMungo1080G0246 Vigna mungo HOM05D007398 ORTHO05D004912 5.7e-12 74.7 128 46.1
Phvul.005G115200 Phaseolus vulgaris HOM05D007398 ORTHO05D004912 7.5e-12 74.3 125 45.6
Duzib248G0799 Durio zibethinus HOM05D007398 ORTHO05D004912 1.7e-11 73.2 126 42.9
Gohir.A12G157600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.7e-11 73.2 126 44.4
Gohir.A04G144600 Gossypium hirsutum HOM05D007398 ORTHO05D004912 6.3e-11 71.2 124 45.2
Gorai.008G173500 Gossypium raimondii HOM05D007398 ORTHO05D004912 8.3e-11 70.9 126 43.7
Gohir.D04G189100 Gossypium hirsutum HOM05D007398 ORTHO05D004912 1.1e-10 70.5 121 43.8
Lalb_Chr24g0393181 Lupinus albus HOM05D007398 ORTHO05D004912 1.1e-10 70.5 124 41.1
A03p14360 Brassica napus HOM05D009587 ORTHO05D004912 2.4e-10 69.3 125 37.6
BolC3t14094H Brassica oleracea HOM05D009587 ORTHO05D004912 4.1e-10 68.6 125 37.6
C03p16740 Brassica napus HOM05D009587 ORTHO05D004912 5.4e-10 68.2 125 38.4
Cpa.g.sc12.298 Carica papaya HOM05D007398 ORTHO05D004912 5.4e-10 68.2 90 43.3
Gohir.D12G159800 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.4e-10 68.2 126 42.9
QL07p015665 Quercus lobata HOM05D007398 ORTHO05D004912 5.4e-10 68.2 114 46.5
AT5G54970 Arabidopsis thaliana HOM05D009587 ORTHO05D004912 7.0e-10 67.8 128 40.6
Gorai.012G184400 Gossypium raimondii HOM05D007398 ORTHO05D004912 9.1e-10 67.4 121 43.8
Actinidia03605 Actinidia chinensis HOM05D007398 ORTHO05D004912 2.0e-09 66.2 113 41.6
Eucgr.K00797 Eucalyptus grandis HOM05D007398 ORTHO05D004912 2.0e-09 66.2 136 41.2
BcaC01g06332 Brassica carinata HOM05D009587 ORTHO05D004912 2.7e-09 65.9 118 39.0
Duzib213G1052 Durio zibethinus HOM05D007398 ORTHO05D004912 2.7e-09 65.9 95 42.1
Thecc.07G035100 Theobroma cacao HOM05D007398 ORTHO05D004912 3.5e-09 65.5 95 41.1
Oeu041920.1 Olea europaea HOM05D007398 ORTHO05D004912 4.5e-09 65.1 113 38.1
Lsat_1_v5_gn_9_106500 Lactuca sativa HOM05D007398 ORTHO05D004912 5.9e-09 64.7 134 37.3
HanXRQChr16g0504931 Helianthus annuus HOM05D007398 ORTHO05D004912 1.0e-08 63.9 108 42.6
Manes.13G070200 Manihot esculenta HOM05D007398 ORTHO05D004912 1.3e-08 63.5 93 46.2
PSO541G0095 Papaver somniferum HOM05D007398 ORTHO05D004912 1.7e-08 63.2 125 36.8
AL8G30440 Arabidopsis lyrata HOM05D009587 ORTHO05D004912 2.9e-08 62.4 129 36.4
Carub.0008s1526 Capsella rubella HOM05D009587 ORTHO05D004912 2.9e-08 62.4 128 38.3
Gohir.D01G067500 Gossypium hirsutum HOM05D007398 ORTHO05D004912 5.0e-08 61.6 117 38.5
Gorai.002G089400 Gossypium raimondii HOM05D007398 ORTHO05D004912 5.0e-08 61.6 117 38.5
Cc05_g04620 Coffea canephora HOM05D007398 ORTHO05D004912 8.5e-08 60.8 123 37.4
Gohir.A01G080300 Gossypium hirsutum HOM05D007398 ORTHO05D004912 8.5e-08 60.8 112 39.3
THA.LOC104813425 Tarenaya hassleriana HOM05D009587 ORTHO05D004912 8.5e-08 60.8 113 39.8
Aa31LG3G10880 Aethionema arabicum HOM05D009587 ORTHO05D004912 1.1e-07 60.5 130 36.2
Manes.15G071300 Manihot esculenta HOM05D007398 ORTHO05D004912 1.1e-07 60.5 96 41.7
Sc16g0005970 Simmondsia chinensis HOM05D007398 ORTHO05D004912 1.1e-07 60.5 101 41.6
unitig_744.g24521 Utricularia gibba HOM05D011575 ORTHO05D004912 1.1e-07 60.5 98 42.9
BcaB01g04338 Brassica carinata HOM05D009587 ORTHO05D004912 1.5e-07 60.1 124 34.7
HanXRQChr03g0069481 Helianthus annuus HOM05D007398 ORTHO05D004912 2.5e-07 59.3 103 40.8
Lalb_Chr19g0135871 Lupinus albus HOM05D007398 ORTHO05D004912 2.5e-07 59.3 124 41.1
Manes.03G130000 Manihot esculenta HOM05D007398 ORTHO05D004912 4.2e-07 58.5 98 40.8
Glyma.14G163600 Glycine max HOM05D011727 ORTHO05D004912 5.5e-07 58.2 103 39.8
Rhsim06G0162600 Rhododendron simsii HOM05D007398 ORTHO05D004912 5.5e-07 58.2 126 34.1
CDE01G0169 Ceratophyllum demersum HOM05D001264 ORTHO05D001167 9.4e-07 57.4 130 35.4
CsaV3_1G041740 Cucumis sativus L. HOM05D032147 ORTHO05D034646 9.4e-07 57.4 113 38.1
CARHR268310 Cardamine hirsuta HOM05D009587 ORTHO05D004912 2.1e-06 56.2 88 42.0
Migut.M01320 Erythranthe guttata HOM05D011575 ORTHO05D004912 2.1e-06 56.2 101 40.6
Aqoxy1G02145 Aquilegia oxysepala HOM05D007398 ORTHO05D004912 2.7e-06 55.8 127 36.2
CARHR234560 Cardamine hirsuta HOM05D009587 ORTHO05D004912 3.6e-06 55.5 90 42.2
PGR083G1220 Punica granatum HOM05D007398 ORTHO05D004912 3.6e-06 55.5 85 45.9
Thhalv10015018m.g Eutrema salsugineum HOM05D009587 ORTHO05D004912 4.7e-06 55.1 93 41.9
MBI02_g21879_MAGBIO Magnolia biondii HOM05D007398 ORTHO05D004912 8.0e-06 54.3 111 40.5


User provided reference genes

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