Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 8.5e-83 310.5 175 100.0
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 4.2e-50 201.8 167 76.6
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 8.8e-48 194.1 163 74.8
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 9.8e-47 190.7 164 74.4
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 4.3e-34 148.7 104 70.2
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 2.3e-32 142.9 81 81.5
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 2.3e-32 142.9 117 63.2
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 2.3e-32 142.9 89 76.4
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 3.1e-32 142.5 87 77.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 3.1e-32 142.5 177 52.5
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 3.1e-32 142.5 109 65.1
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 4.0e-32 142.1 177 52.0
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 5.2e-32 141.7 103 68.0
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 6.8e-32 141.4 173 52.6
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 1.2e-31 140.6 90 74.4
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 1.2e-31 140.6 106 69.8
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 1.5e-31 140.2 171 52.0
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 2.6e-31 139.4 65 93.8
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 3.4e-31 139.0 82 78.0
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 3.4e-31 139.0 162 53.7
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 3.4e-31 139.0 93 71.0
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 3.4e-31 139.0 102 68.6
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 4.4e-31 138.7 146 52.1
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 5.8e-31 138.3 173 49.7
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 7.5e-31 137.9 110 64.5
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 7.5e-31 137.9 115 64.3
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 7.5e-31 137.9 97 66.0
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 7.5e-31 137.9 101 70.3
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 9.8e-31 137.5 145 54.5
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 9.8e-31 137.5 115 60.9
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 9.8e-31 137.5 111 64.0
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 9.8e-31 137.5 85 75.3
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 2.2e-30 136.3 69 85.5
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 2.2e-30 136.3 113 63.7
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 2.9e-30 136.0 65 90.8
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 2.9e-30 136.0 64 92.2
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 3.7e-30 135.6 98 70.4
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 4.9e-30 135.2 78 76.9
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 6.4e-30 134.8 90 71.1
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 6.4e-30 134.8 74 81.1
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 6.4e-30 134.8 76 82.9
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.1e-29 134.0 85 75.3
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.1e-29 134.0 65 90.8
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 1.1e-29 134.0 145 52.4
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 1.4e-29 133.7 111 61.3
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.4e-29 133.7 86 77.9
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 1.4e-29 133.7 94 67.0
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 1.9e-29 133.3 101 65.3
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 1.9e-29 133.3 91 69.2
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 1.9e-29 133.3 171 49.7
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 2.4e-29 132.9 101 63.4
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 2.4e-29 132.9 90 73.3
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 2.4e-29 132.9 71 83.1
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 3.2e-29 132.5 104 65.4
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 5.4e-29 131.7 84 73.8
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 5.4e-29 131.7 114 61.4
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 5.4e-29 131.7 64 89.1
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 7.0e-29 131.3 88 71.6
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 7.0e-29 131.3 100 64.0
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 9.2e-29 131.0 89 70.8
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 1.6e-28 130.2 144 54.2
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 1.6e-28 130.2 183 47.5
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 2.0e-28 129.8 68 83.8
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 2.7e-28 129.4 115 56.5
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 2.7e-28 129.4 145 53.8
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 2.7e-28 129.4 176 49.4
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 4.6e-28 128.6 89 65.2
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 6.0e-28 128.3 90 66.7
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 6.0e-28 128.3 92 69.6
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 6.0e-28 128.3 147 48.3
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 7.8e-28 127.9 84 75.0
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 2.3e-27 126.3 84 73.8
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 3.9e-27 125.6 84 65.5
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 3.9e-27 125.6 89 70.8
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 3.9e-27 125.6 145 46.2
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 8.6e-27 124.4 96 60.4
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 8.6e-27 124.4 96 60.4
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 8.6e-27 124.4 92 66.3
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 8.6e-27 124.4 112 59.8
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 1.5e-26 123.6 97 67.0
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 1.5e-26 123.6 153 50.3
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.5e-26 123.6 153 50.3
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.5e-26 123.6 153 50.3
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.9e-26 123.2 74 73.0
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 1.9e-26 123.2 79 69.6
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.9e-26 123.2 74 73.0
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 1.9e-26 123.2 79 69.6
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 1.9e-26 123.2 79 69.6
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 4.3e-26 122.1 79 69.6
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 5.6e-26 121.7 153 49.0
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 9.5e-26 120.9 99 62.6
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 9.5e-26 120.9 87 62.1
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 3.6e-25 119.0 94 61.7
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 4.7e-25 118.6 120 55.0
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 6.2e-25 118.2 152 50.7
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.8e-24 116.7 85 65.9
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 4.0e-24 115.5 103 56.3
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 5.2e-24 115.2 64 78.1
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 5.8e-23 111.7 68 70.6
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 7.5e-23 111.3 96 57.3
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 2.9e-22 109.4 66 72.7
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 1.9e-21 106.7 52 86.5
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 3.5e-20 102.4 99 50.5
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 3.9e-19 99.0 148 41.9
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 1.5e-15 87.0 82 46.3
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 1.0e-11 74.3 89 40.4
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 6.8e-08 61.6 54 48.1
MBI06_g44793_MAGBIO Magnolia biondii HOM05D007361 ORTHO05D009239 3.8e-06 55.8 44 59.1


User provided reference genes

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