Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017102 Sechium edule HOM05D002134 ORTHO05D003893 2.0e-32 141.7 68 100.0
Sed0018900 Sechium edule HOM05D002134 ORTHO05D003893 2.4e-17 91.7 109 48.6
CsaV3_3G045020 Cucumis sativus L. HOM05D002134 ORTHO05D003893 2.9e-15 84.7 109 44.0
ClCG05G019120 Citrullus lanatus HOM05D002134 ORTHO05D003893 1.5e-14 82.4 123 43.1
Lalb_Chr24g0399021 Lupinus albus HOM05D002134 ORTHO05D003893 1.0e-12 76.3 109 41.3
PSO541G3855 Papaver somniferum HOM05D002134 ORTHO05D003893 6.8e-12 73.6 105 42.9
Prupe.1G381300 Prunus persica HOM05D002134 ORTHO05D003893 1.5e-11 72.4 109 39.4
Sabra14G0141100 Salix brachista HOM05D002134 ORTHO05D003893 2.6e-11 71.6 109 38.5
Lalb_Chr22g0355501 Lupinus albus HOM05D002134 ORTHO05D003893 3.4e-11 71.2 109 37.6
Manes.05G161500 Manihot esculenta HOM05D002134 ORTHO05D003893 4.4e-11 70.9 109 41.3
Cc10_g03050 Coffea canephora HOM05D002134 ORTHO05D003893 5.7e-11 70.5 109 40.4
Potri.014G181000 Populus trichocarpa HOM05D002134 ORTHO05D003893 7.5e-11 70.1 105 38.1
Sabra02G0199500 Salix brachista HOM05D002134 ORTHO05D003893 7.5e-11 70.1 109 39.4
Peaxi162Scf00690g00121 Petunia axillaris HOM05D002134 ORTHO05D003893 9.8e-11 69.7 105 40.0
SalBow7G2089 Salvia bowleyana HOM05D002134 ORTHO05D003893 9.8e-11 69.7 109 37.6
Hma1.2p1_0469F.1_g159180 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 1.3e-10 69.3 109 37.6
Lalb_Chr14g0369171 Lupinus albus HOM05D002134 ORTHO05D003893 1.3e-10 69.3 109 37.6
Solyc04g080190.3 Solanum lycopersicum HOM05D002134 ORTHO05D003893 1.3e-10 69.3 105 40.0
Sopen04g033780 Solanum pennellii HOM05D002134 ORTHO05D003893 1.3e-10 69.3 105 40.0
CAN.G1139.10 Capsicum annuum HOM05D002134 ORTHO05D003893 1.7e-10 68.9 105 40.0
Migut.C00709 Erythranthe guttata HOM05D002134 ORTHO05D003893 1.7e-10 68.9 109 38.5
FvH4_2g39980 Fragaria vesca HOM05D002134 ORTHO05D003893 1.7e-10 68.9 109 38.5
FAN27G0841 Fragaria x ananassa HOM05D002134 ORTHO05D003893 1.7e-10 68.9 109 38.5
Nitab4.5_0000110g0550 Nicotiana tabacum HOM05D002134 ORTHO05D003893 1.7e-10 68.9 105 39.0
CAN.G1126.43 Capsicum annuum HOM05D002134 ORTHO05D003893 2.2e-10 68.6 103 39.8
RcHm_v2.0_Chr6g0300771 Rosa chinensis HOM05D002134 ORTHO05D003893 2.2e-10 68.6 109 38.5
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.8e-10 68.2 109 38.5
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 3.7e-10 67.8 109 37.6
THA.LOC104822842 Tarenaya hassleriana HOM05D002134 ORTHO05D003893 3.7e-10 67.8 105 38.1
TWI36G0543 Tripterygium wilfordii HOM05D002134 ORTHO05D003893 3.7e-10 67.8 109 39.4
Dinv36066 Davidia involucrata HOM05D002134 ORTHO05D003893 4.8e-10 67.4 109 37.6
Nn5g29546 Nelumbo nucifera HOM05D002134 ORTHO05D003893 4.8e-10 67.4 105 40.0
Psat6g006400 Pisum sativum HOM05D002134 ORTHO05D003893 4.8e-10 67.4 109 38.5
Potri.002G262700 Populus trichocarpa HOM05D002134 ORTHO05D003893 4.8e-10 67.4 109 38.5
arahy.Tifrunner.gnm1.ann1.19G7CF Arachis hypogaea HOM05D002134 ORTHO05D003893 6.3e-10 67.0 109 37.6
arahy.Tifrunner.gnm1.ann1.F0DT7Y Arachis hypogaea HOM05D002134 ORTHO05D003893 6.3e-10 67.0 109 37.6
CSS0002761 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D003893 6.3e-10 67.0 105 39.0
Manes.18G028300 Manihot esculenta HOM05D002134 ORTHO05D003893 6.3e-10 67.0 109 38.5
Medtr1g022050 Medicago truncatula HOM05D002134 ORTHO05D003893 6.3e-10 67.0 109 37.6
PGSC0003DMG400005143 Solanum tuberosum HOM05D002134 ORTHO05D003893 6.3e-10 67.0 105 38.1
Cpa.g.sc64.75 Carica papaya HOM05D002134 ORTHO05D003893 8.3e-10 66.6 105 38.1
Nitab4.5_0003783g0010 Nicotiana tabacum HOM05D002134 ORTHO05D003893 8.3e-10 66.6 105 38.1
Nitab4.5_0000790g0140 Nicotiana tabacum HOM05D002134 ORTHO05D003893 1.4e-09 65.9 105 38.1
Ca_13347_v3 Cicer arietinum L. HOM05D002134 ORTHO05D003893 1.8e-09 65.5 109 37.6
Gohir.A05G195200 Gossypium hirsutum HOM05D002134 ORTHO05D003893 1.8e-09 65.5 104 41.3
MD15G1030300 Malus domestica HOM05D002134 ORTHO05D003893 1.8e-09 65.5 105 40.0
QL02p007979 Quercus lobata HOM05D002134 ORTHO05D003893 1.8e-09 65.5 109 38.5
vmacro21629 Vaccinium macrocarpon HOM05D002134 ORTHO05D003893 1.8e-09 65.5 103 37.9
CANSAT25G1534 Cannabis sativa HOM05D002134 ORTHO05D003893 2.4e-09 65.1 109 37.6
Ciclev10002450m.g Citrus clementina HOM05D002134 ORTHO05D003893 2.4e-09 65.1 105 37.1
Actinidia22557 Actinidia chinensis HOM05D002134 ORTHO05D003893 3.1e-09 64.7 109 37.6
CiPaw.16G055600 Carya illinoinensis HOM05D002134 ORTHO05D003893 3.1e-09 64.7 109 36.7
Hma1.2p1_0203F.1_g086480 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 3.1e-09 64.7 103 36.9
Lj5g0004004 Lotus japonicus HOM05D002134 ORTHO05D003893 3.1e-09 64.7 103 38.8
Cfa018139 Carpinus fangiana HOM05D002134 ORTHO05D003893 4.1e-09 64.3 109 38.5
TAR625G0668 Trochodendron aralioides HOM05D002134 ORTHO05D003893 4.1e-09 64.3 105 37.1
VMungo0647G1701 Vigna mungo HOM05D002134 ORTHO05D003893 4.1e-09 64.3 107 37.4
Actinidia15314 Actinidia chinensis HOM05D000207 ORTHO05D001482 5.4e-09 63.9 109 36.7
THA.LOC104814160 Tarenaya hassleriana HOM05D002134 ORTHO05D003893 5.4e-09 63.9 105 36.2
BcaC06g31735 Brassica carinata HOM05D002134 ORTHO05D003893 7.0e-09 63.5 103 37.9
Gohir.D05G198400 Gossypium hirsutum HOM05D002134 ORTHO05D003893 7.0e-09 63.5 104 40.4
Gorai.009G203500 Gossypium raimondii HOM05D002134 ORTHO05D003893 7.0e-09 63.5 105 41.0
TAR381G0714 Trochodendron aralioides HOM05D002134 ORTHO05D003893 7.0e-09 63.5 103 36.9
Aqoxy6G01056 Aquilegia oxysepala HOM05D002134 ORTHO05D003893 9.1e-09 63.2 105 37.1
AUR62038767 Chenopodium quinoa HOM05D002134 ORTHO05D003893 9.1e-09 63.2 65 50.8
MD08G1033600 Malus domestica HOM05D002134 ORTHO05D003893 1.2e-08 62.8 105 39.0
BcaB07g30598 Brassica carinata HOM05D002134 ORTHO05D003893 1.6e-08 62.4 109 34.9
Thhalv10003270m.g Eutrema salsugineum HOM05D002134 ORTHO05D003893 1.6e-08 62.4 109 34.9
A06p48130 Brassica napus HOM05D002134 ORTHO05D003893 2.0e-08 62.0 103 36.9
BraA06t27682Z Brassica rapa HOM05D002134 ORTHO05D003893 2.0e-08 62.0 103 36.9
AL1G52820 Arabidopsis lyrata HOM05D002134 ORTHO05D003893 2.7e-08 61.6 105 35.2
CARHR036260 Cardamine hirsuta HOM05D002134 ORTHO05D003893 2.7e-08 61.6 105 34.3
Aa31LG9G13080 Aethionema arabicum HOM05D002134 ORTHO05D003893 3.5e-08 61.2 103 35.0
MSTRG.25160 Avicennia marina HOM05D002134 ORTHO05D003893 3.5e-08 61.2 46 58.7
Dinv26817 Davidia involucrata HOM05D002134 ORTHO05D003893 3.5e-08 61.2 105 37.1
Nitab4.5_0001827g0130 Nicotiana tabacum HOM05D002134 ORTHO05D003893 3.5e-08 61.2 105 37.1
Thecc.08G024600 Theobroma cacao HOM05D002134 ORTHO05D003893 3.5e-08 61.2 108 37.0
EL10Ac1g01799 Beta vulgaris HOM05D002134 ORTHO05D003893 4.5e-08 60.8 103 37.9
Duzib116G0461 Durio zibethinus HOM05D002134 ORTHO05D003893 4.5e-08 60.8 104 38.5
unitig_26.g9707 Utricularia gibba HOM05D002134 ORTHO05D003893 4.5e-08 60.8 42 64.3
Glyma.09G114000 Glycine max HOM05D002134 ORTHO05D003893 7.7e-08 60.1 108 36.1
Glyma.14G076000 Glycine max HOM05D002134 ORTHO05D003893 7.7e-08 60.1 108 36.1
Hma1.2p1_0023F.1_g014890 Hydrangea macrophylla HOM05D002134 ORTHO05D003893 7.7e-08 60.1 100 35.0
Phvul.001G015300 Phaseolus vulgaris HOM05D002134 ORTHO05D003893 7.7e-08 60.1 103 36.9
AT1G45170 Arabidopsis thaliana HOM05D002134 ORTHO05D003893 1.0e-07 59.7 105 34.3
BcaC02g10786 Brassica carinata HOM05D002134 ORTHO05D003893 1.0e-07 59.7 104 36.5
BcaC03g16545 Brassica carinata HOM05D002134 ORTHO05D003893 1.0e-07 59.7 46 56.5
A02p27600 Brassica napus HOM05D002134 ORTHO05D003893 1.0e-07 59.7 46 56.5
C02p43630 Brassica napus HOM05D002134 ORTHO05D003893 1.0e-07 59.7 46 56.5
C04p25100 Brassica napus HOM05D002134 ORTHO05D003893 1.0e-07 59.7 104 36.5
BolC2t10405H Brassica oleracea HOM05D002134 ORTHO05D003893 1.0e-07 59.7 46 56.5
BolC4t24014H Brassica oleracea HOM05D002134 ORTHO05D003893 1.0e-07 59.7 104 36.5
BraA02t07793Z Brassica rapa HOM05D002134 ORTHO05D003893 1.0e-07 59.7 46 56.5
AUR62038823 Chenopodium quinoa HOM05D002134 ORTHO05D003893 1.0e-07 59.7 103 36.9
Oeu002842.1 Olea europaea HOM05D002134 ORTHO05D003893 1.3e-07 59.3 102 36.3
Sp2g07710 Schrenkiella parvula HOM05D002134 ORTHO05D003893 1.3e-07 59.3 46 56.5
Lj2C449G12 Lonicera japonica HOM05D002134 ORTHO05D003893 1.7e-07 58.9 105 34.3
MBI16_g35645_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D003893 1.7e-07 58.9 106 34.9
MBI16_g36971_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D003893 1.7e-07 58.9 106 34.9
Oeu009869.1 Olea europaea HOM05D002134 ORTHO05D003893 1.7e-07 58.9 101 36.6
Carub.0008s0579 Capsella rubella HOM05D002134 ORTHO05D003893 2.9e-07 58.2 103 35.9
Lj4A785T30 Lonicera japonica HOM05D002134 ORTHO05D003893 2.9e-07 58.2 100 35.0
Hund17648 Selenicereus undatus HOM05D002134 ORTHO05D003893 2.9e-07 58.2 109 33.0
Duzib093G1509 Durio zibethinus HOM05D002134 ORTHO05D003893 3.8e-07 57.8 108 35.2
AT5G42960 Arabidopsis thaliana HOM05D002134 ORTHO05D003893 5.0e-07 57.4 103 35.9
CSS0042168 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D003893 5.0e-07 57.4 103 35.0
Peaxi162Scf00515g00222 Petunia axillaris HOM05D002134 ORTHO05D003893 5.0e-07 57.4 105 35.2
Cc07_g09280 Coffea canephora HOM05D002134 ORTHO05D003893 6.6e-07 57.0 106 33.0
CDE02G2135 Ceratophyllum demersum HOM05D002134 ORTHO05D003893 8.6e-07 56.6 103 35.9
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 8.6e-07 56.6 100 35.0
Eucgr.F01905 Eucalyptus grandis HOM05D002134 ORTHO05D003893 8.6e-07 56.6 46 58.7
Atru.chr13.505 Acer truncatum HOM05D002134 ORTHO05D003893 1.5e-06 55.8 99 35.4
Gorai.005G107300 Gossypium raimondii HOM05D002134 ORTHO05D003893 1.5e-06 55.8 104 33.7
CiPaw.15G075900 Carya illinoinensis HOM05D002134 ORTHO05D003893 1.9e-06 55.5 104 35.6
CDE01G0655 Ceratophyllum demersum HOM05D002134 ORTHO05D003893 1.9e-06 55.5 103 35.0
Solyc12g089100.2 Solanum lycopersicum HOM05D002134 ORTHO05D003893 1.9e-06 55.5 107 32.7
AL8G17810 Arabidopsis lyrata HOM05D002134 ORTHO05D003893 2.5e-06 55.1 103 35.0
Nitab4.5_0002296g0030 Nicotiana tabacum HOM05D002134 ORTHO05D003893 2.5e-06 55.1 96 36.5
PGR083G0986 Punica granatum HOM05D002134 ORTHO05D003893 3.3e-06 54.7 46 56.5
Gohir.A03G078300 Gossypium hirsutum HOM05D002134 ORTHO05D003893 4.2e-06 54.3 104 32.7
DCAR_019525 Daucus carota HOM05D002134 ORTHO05D003893 5.5e-06 53.9 94 35.1
Sopen12g030980 Solanum pennellii HOM05D002134 ORTHO05D003893 5.5e-06 53.9 108 32.4
PGSC0003DMG401015455 Solanum tuberosum HOM05D002134 ORTHO05D003893 5.5e-06 53.9 109 32.1
PSO528G0218 Papaver somniferum HOM05D002134 ORTHO05D003893 7.2e-06 53.5 56 51.8
Hund16584 Selenicereus undatus HOM05D002134 ORTHO05D003893 7.2e-06 53.5 105 32.4


User provided reference genes

Program Settings