Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017066 Sechium edule HOM05D009218 ORTHO05D010069 2.3e-75 285.4 138 100.0
ClCG02G016900 Citrullus lanatus HOM05D009218 ORTHO05D010069 1.2e-26 123.6 131 60.3
CsaV3_2G003870 Cucumis sativus L. HOM05D009218 ORTHO05D010069 5.4e-24 114.8 149 55.0
MELO3C004408.2 Cucumis melo HOM05D009218 ORTHO05D010069 7.8e-23 110.9 148 54.1
Sed0021944 Sechium edule HOM05D009218 ORTHO05D010069 1.5e-21 106.7 107 58.9
Cpa.g.sc162.8 Carica papaya HOM05D009218 ORTHO05D010069 1.3e-09 67.0 141 38.3
Potri.013G043800 Populus trichocarpa HOM05D011447 ORTHO05D010069 3.7e-09 65.5 109 41.3
Potri.019G013750 Populus trichocarpa HOM05D011447 ORTHO05D010069 8.3e-09 64.3 109 39.4
Potri.016G093900 Populus trichocarpa HOM05D011447 ORTHO05D010069 3.2e-08 62.4 74 50.0
FAN05G0115 Fragaria x ananassa HOM05D009218 ORTHO05D010069 4.1e-08 62.0 66 50.0
FAN05G4900 Fragaria x ananassa HOM05D009218 ORTHO05D010069 4.1e-08 62.0 66 50.0
CiPaw.07G070200 Carya illinoinensis HOM05D009218 ORTHO05D010069 5.4e-08 61.6 55 56.4
FvH4_6g02470 Fragaria vesca HOM05D009218 ORTHO05D010069 5.4e-08 61.6 103 41.7
FAN14G1769 Fragaria x ananassa HOM05D009218 ORTHO05D010069 5.4e-08 61.6 103 41.7
FAN14G5335 Fragaria x ananassa HOM05D009218 ORTHO05D010069 5.4e-08 61.6 103 41.7
FAN02G3090 Fragaria x ananassa HOM05D009218 ORTHO05D010069 7.1e-08 61.2 51 56.9
FAN09G2898 Fragaria x ananassa HOM05D009218 ORTHO05D010069 7.1e-08 61.2 51 56.9
Sc20g0000500 Simmondsia chinensis HOM05D009218 ORTHO05D010069 9.2e-08 60.8 38 73.7
Sabra13G0040600 Salix brachista HOM05D011447 ORTHO05D010069 1.2e-07 60.5 111 40.5
Manes.08G137100 Manihot esculenta HOM05D011447 ORTHO05D010069 1.6e-07 60.1 52 61.5
Potri.019G013300 Populus trichocarpa HOM05D011447 ORTHO05D010069 1.6e-07 60.1 106 38.7
Prupe.6G347000 Prunus persica HOM05D009218 ORTHO05D010069 2.1e-07 59.7 75 52.0
Sabra19G0016800 Salix brachista HOM05D001365 ORTHO05D010069 2.1e-07 59.7 79 45.6
Sabra19G0016900 Salix brachista HOM05D011447 ORTHO05D010069 2.1e-07 59.7 99 43.4
Sabra19G0026300 Salix brachista HOM05D011447 ORTHO05D010069 2.1e-07 59.7 99 43.4
Sed0020224 Sechium edule HOM05D009218 ORTHO05D010069 2.1e-07 59.7 62 53.2
Dinv05728 Davidia involucrata HOM05D009218 ORTHO05D010069 2.7e-07 59.3 118 36.4
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.5e-07 58.9 51 60.8
QL03p028359 Quercus lobata HOM05D009218 ORTHO05D010069 4.6e-07 58.5 84 44.0
RcHm_v2.0_Chr3g0450331 Rosa chinensis HOM05D009218 ORTHO05D010069 6.0e-07 58.2 50 60.0
QL03p029061 Quercus lobata HOM05D009218 ORTHO05D010069 7.8e-07 57.8 76 44.7
Eucgr.H04261 Eucalyptus grandis HOM05D009218 ORTHO05D010069 1.7e-06 56.6 45 60.0
ClCG02G016910 Citrullus lanatus HOM05D009218 ORTHO05D010069 2.3e-06 56.2 70 52.9
Sabra19G0026400 Salix brachista HOM05D011447 ORTHO05D010069 2.3e-06 56.2 100 42.0
CsaV3_2G003860 Cucumis sativus L. HOM05D009218 ORTHO05D010069 3.0e-06 55.8 34 79.4
Gohir.A13G168950 Gossypium hirsutum HOM05D009218 ORTHO05D010069 3.0e-06 55.8 33 81.8
BcaC02g09866 Brassica carinata HOM05D002974 ORTHO05D002992 3.9e-06 55.5 126 36.5
C04p35760 Brassica napus HOM05D002974 ORTHO05D002992 3.9e-06 55.5 126 36.5
BolC4t25224H Brassica oleracea HOM05D002974 ORTHO05D002992 3.9e-06 55.5 126 36.5
Gorai.013G186400 Gossypium raimondii HOM05D009218 ORTHO05D010069 3.9e-06 55.5 33 78.8
BraA04t16084Z Brassica rapa HOM05D002974 ORTHO05D002992 5.1e-06 55.1 127 35.4
PGR004G0279 Punica granatum HOM05D011447 ORTHO05D010069 5.1e-06 55.1 55 56.4
Sabra19G0016700 Salix brachista HOM05D011447 ORTHO05D010069 5.1e-06 55.1 82 43.9
BraA04t16085Z Brassica rapa HOM05D002974 ORTHO05D002992 6.6e-06 54.7 110 38.2
Nn3g19575 Nelumbo nucifera HOM05D011447 ORTHO05D010069 8.6e-06 54.3 39 66.7
Rhsim05G0175900 Rhododendron simsii HOM05D009218 ORTHO05D010069 8.6e-06 54.3 114 36.0


User provided reference genes

Program Settings