Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 1.5e-97 360.1 275 100.0
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.6e-11 74.3 120 49.2
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.0e-10 71.6 51 70.6
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 2.3e-10 70.5 51 68.6
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-09 67.8 64 54.7
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 1.5e-09 67.8 89 64.0
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.0e-09 67.4 49 65.3
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 2.6e-09 67.0 49 67.3
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.6e-09 67.0 49 67.3
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 3.3e-09 66.6 65 53.8
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.3e-09 66.6 44 72.7
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.3e-09 66.6 100 63.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 5.7e-09 65.9 65 55.4
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.7e-09 65.9 44 70.5
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 7.5e-09 65.5 69 53.6
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 9.7e-09 65.1 52 65.4
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 9.7e-09 65.1 60 60.0
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 1.3e-08 64.7 92 60.9
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.3e-08 64.7 49 63.3
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.7e-08 64.3 95 51.6
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.2e-08 63.9 90 54.4
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.8e-08 63.5 49 67.3
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.8e-08 63.5 55 58.2
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 4.8e-08 62.8 112 55.4
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 4.8e-08 62.8 118 50.0
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.8e-08 62.8 49 63.3
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 4.8e-08 62.8 52 59.6
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.8e-08 62.8 82 50.0
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.3e-08 62.4 47 63.8
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 8.2e-08 62.0 43 72.1
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.2e-08 62.0 70 50.0
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.8e-07 60.8 111 55.9
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.8e-07 60.8 46 63.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.8e-07 60.8 92 58.7
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 1.8e-07 60.8 119 53.8
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.4e-07 60.5 61 52.5
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.4e-07 60.5 236 40.3
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.4e-07 60.5 90 60.0
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 2.4e-07 60.5 90 60.0
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.1e-07 60.1 45 62.2
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.1e-07 59.7 57 56.1
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 4.1e-07 59.7 90 52.2
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 5.3e-07 59.3 80 47.5
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 7.0e-07 58.9 64 54.7
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.0e-07 58.9 62 54.8
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 7.0e-07 58.9 52 57.7
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.0e-07 58.9 47 61.7
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 9.1e-07 58.5 95 60.0
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 9.1e-07 58.5 115 53.9
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.1e-07 58.5 93 61.3
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.1e-07 58.5 43 69.8
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.1e-07 58.5 93 61.3
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.6e-06 57.8 89 44.9
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 1.6e-06 57.8 50 64.0
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.0e-06 57.4 57 56.1
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 2.7e-06 57.0 61 54.1
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.7e-06 57.0 49 59.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.7e-06 57.0 44 61.4
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.7e-06 57.0 49 61.2
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 2.7e-06 57.0 47 59.6
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.5e-06 56.6 104 45.2
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.5e-06 56.6 90 61.1
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.5e-06 56.6 60 53.3
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.5e-06 56.6 58 53.4
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.5e-06 56.6 43 67.4
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 4.5e-06 56.2 54 53.7
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 5.9e-06 55.8 54 51.9
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 7.7e-06 55.5 49 57.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 7.7e-06 55.5 47 57.4
ClCG08G002110 Citrullus lanatus HOM05D035606 ORTHO05D002930 7.7e-06 55.5 63 57.1
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.7e-06 55.5 49 55.1


User provided reference genes

Program Settings